RNA–Protein interactions for RNA: ENSMUST00000182709.7

Rnf4-207, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 3,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-207ENSMUST00000182709 Mp68P56379 58 aa7.61□□□□□ -1.19
Rnf4-207ENSMUST00000182709 Rpl37Q9D823 97 aa7.59□□□□□ -1.19
Rnf4-207ENSMUST00000182709 Gm20538F6Z9R1 75 aa7.59□□□□□ -1.19
Rnf4-207ENSMUST00000182709 Romo1P60603 79 aa7.59□□□□□ -1.19
Rnf4-207ENSMUST00000182709 2310057N15RikQ9D6T8 200 aa7.57□□□□□ -1.2
Rnf4-207ENSMUST00000182709 Herc1E9PZP8 4859 aa7.57□□□□□ -1.2
Rnf4-207ENSMUST00000182709 Cox6b2Q80ZN9 88 aa7.54□□□□□ -1.2
Rnf4-207ENSMUST00000182709 Gm10318A0A1W2P728 225 aa7.42□□□□□ -1.22
Rnf4-207ENSMUST00000182709 Prm2P07978 107 aa7.41□□□□□ -1.22
Rnf4-207ENSMUST00000182709 Gm9955Q8CEJ8 102 aa7.4□□□□□ -1.22
Rnf4-207ENSMUST00000182709 Crct1Q6PAI5 102 aa7.37□□□□□ -1.23
Rnf4-207ENSMUST00000182709 Gm10382Q3V0T5 144 aa7.35□□□□□ -1.23
Rnf4-207ENSMUST00000182709 Gm17606F6ZL36 78 aa7.34□□□□□ -1.23
Rnf4-207ENSMUST00000182709 Gm21887J3QQ04 176 aa7.29□□□□□ -1.24
Rnf4-207ENSMUST00000182709 Gm17416Q30KP4 66 aa7.26□□□□□ -1.25
Rnf4-207ENSMUST00000182709 Ubr4A2AN08 5180 aa7.26□□□□□ -1.25
Rnf4-207ENSMUST00000182709 Sec61bQ9CQS8 96 aaKnown RBP7.22□□□□□ -1.25
Rnf4-207ENSMUST00000182709 Lce1mQ9CR91 182 aa7.22□□□□□ -1.25
Rnf4-207ENSMUST00000182709 Krtap3-1A2A591 98 aa7.18□□□□□ -1.26
Rnf4-207ENSMUST00000182709 Krtap13-1Q8K198 168 aa7.17□□□□□ -1.26
Rnf4-207ENSMUST00000182709 Ush2AQ2QI47 5193 aa7.15□□□□□ -1.27
Rnf4-207ENSMUST00000182709 2210017I01RikA0A0A6YVV1 95 aa7.14□□□□□ -1.27
Rnf4-207ENSMUST00000182709 Gm18596A0A1W2P860 280 aa7.06□□□□□ -1.28
Rnf4-207ENSMUST00000182709 Ndufaf8A2AMZ4 74 aa7.06□□□□□ -1.28
Rnf4-207ENSMUST00000182709 ZanO88799 5376 aa7.05□□□□□ -1.28
Rnf4-207ENSMUST00000182709 Krtap16-3Q8C1I6 86 aa7.04□□□□□ -1.28
Rnf4-207ENSMUST00000182709 Hmcn2A2AJ76 5100 aa7.02□□□□□ -1.29
Rnf4-207ENSMUST00000182709 Fam229aB2KGE5 128 aa7.01□□□□□ -1.29
Rnf4-207ENSMUST00000182709 Fat4Q2PZL6 4981 aa6.97□□□□□ -1.29
Rnf4-207ENSMUST00000182709 Gm19426M0QWC7 77 aa6.95□□□□□ -1.3
Rnf4-207ENSMUST00000182709 BC029722A0A0N4SW31 51 aa6.94□□□□□ -1.3
Rnf4-207ENSMUST00000182709 Krtap19-3Q925H6 87 aa6.92□□□□□ -1.3
Rnf4-207ENSMUST00000182709 Krtap19-1Q925H2 87 aa6.91□□□□□ -1.3
Rnf4-207ENSMUST00000182709 4932415D10RikA0A1W2P6U8 4986 aa6.91□□□□□ -1.3
Rnf4-207ENSMUST00000182709 Krtap1-5A2A590 122 aa6.87□□□□□ -1.31
Rnf4-207ENSMUST00000182709 B930094E09RikQ8C4T2 136 aa6.86□□□□□ -1.31
Rnf4-207ENSMUST00000182709 LorP18165 486 aa6.84□□□□□ -1.31
Rnf4-207ENSMUST00000182709 Krtap1-3A2A588 173 aa6.83□□□□□ -1.32
Rnf4-207ENSMUST00000182709 Spink7Q6IE32 76 aa6.82□□□□□ -1.32
Rnf4-207ENSMUST00000182709 Krtap7-1Q9D3I6 87 aa6.82□□□□□ -1.32
Rnf4-207ENSMUST00000182709 Rnf213E9Q555 5152 aaKnown RBP6.78□□□□□ -1.32
Rnf4-207ENSMUST00000182709 Gm19402J3QJV4 266 aa6.76□□□□□ -1.33
Rnf4-207ENSMUST00000182709 Gm9789Q8BIG3 52 aa6.72□□□□□ -1.33
Rnf4-207ENSMUST00000182709 Gm19668J3QMD1 248 aa6.68□□□□□ -1.34
Rnf4-207ENSMUST00000182709 Gm7735D3YX18 52 aa6.65□□□□□ -1.35
Rnf4-207ENSMUST00000182709 Prm1P02319 51 aa6.61□□□□□ -1.35
Rnf4-207ENSMUST00000182709 Gm40193A0A1B0GT39 78 aa6.57□□□□□ -1.36
Rnf4-207ENSMUST00000182709 Krtap1-4Q3V2D6 188 aa6.56□□□□□ -1.36
Rnf4-207ENSMUST00000182709 Lce1jD3YUU5 139 aa6.52□□□□□ -1.37
Rnf4-207ENSMUST00000182709 Gm9112A2AI92 75 aa6.5□□□□□ -1.37
Rnf4-207ENSMUST00000182709 Gm17402F6Z0L5 76 aa6.49□□□□□ -1.37
Rnf4-207ENSMUST00000182709 Krtap17-1A2A5X6 109 aa6.46□□□□□ -1.38
Rnf4-207ENSMUST00000182709 Sprr2a3Q4KL71 83 aa6.43□□□□□ -1.38
Rnf4-207ENSMUST00000182709 Sprr2a1Q9CQK8 83 aa6.43□□□□□ -1.38
Rnf4-207ENSMUST00000182709 Krtap12-1Q9Z287 130 aa6.37□□□□□ -1.39
Rnf4-207ENSMUST00000182709 Krtap19-9aF8WH65 55 aa6.27□□□□□ -1.41
Rnf4-207ENSMUST00000182709 Camk2n1Q6QWF9 78 aa6.26□□□□□ -1.41
Rnf4-207ENSMUST00000182709 Krtap9-5A2A5X3 358 aa6.2□□□□□ -1.42
Rnf4-207ENSMUST00000182709 SspoQ8CG65 4998 aa6.17□□□□□ -1.42
Rnf4-207ENSMUST00000182709 Krtap19-2Q925I0 141 aa6.16□□□□□ -1.42
Rnf4-207ENSMUST00000182709 Gm10061D3Z714 54 aa6.12□□□□□ -1.43
Rnf4-207ENSMUST00000182709 Lce1iQ9D6P5 149 aa6.07□□□□□ -1.44
Rnf4-207ENSMUST00000182709 Lce1a2Q9D1K4 149 aa6.02□□□□□ -1.45
Rnf4-207ENSMUST00000182709 Mdn1A2ANY6 5589 aaKnown RBP5.96□□□□□ -1.46
Rnf4-207ENSMUST00000182709 Tnp1P10856 55 aa5.93□□□□□ -1.46
Rnf4-207ENSMUST00000182709 Gm11569B1AQB1 180 aa5.85□□□□□ -1.47
Rnf4-207ENSMUST00000182709 Gm6358A0A087WPH4 74 aa5.82□□□□□ -1.48
Rnf4-207ENSMUST00000182709 Muc5bE9Q5I3 4800 aa5.82□□□□□ -1.48
Rnf4-207ENSMUST00000182709 Mt2P02798 61 aa5.74□□□□□ -1.49
Rnf4-207ENSMUST00000182709 Krtap8-1O08633 61 aa5.72□□□□□ -1.49
Rnf4-207ENSMUST00000182709 Krtap19-9bQ99NG9 58 aa5.71□□□□□ -1.5
Rnf4-207ENSMUST00000182709 Krtap9-3Q3V2C1 136 aa5.66□□□□□ -1.5
Rnf4-207ENSMUST00000182709 2310046K23RikA0A0A6YVW6 87 aa5.56□□□□□ -1.52
Rnf4-207ENSMUST00000182709 Lce1hQ9D6R3 140 aa5.54□□□□□ -1.52
Rnf4-207ENSMUST00000182709 Krtap4-6Q3V4B7 195 aa5.44□□□□□ -1.54
Rnf4-207ENSMUST00000182709 Krtap22-2J3QNX6 67 aa5.38□□□□□ -1.55
Rnf4-207ENSMUST00000182709 Fsip2A2ARZ3 6995 aa5.36□□□□□ -1.55
Rnf4-207ENSMUST00000182709 Krtap4-2B1AQ85 167 aa5.34□□□□□ -1.56
Rnf4-207ENSMUST00000182709 Syne2Q6ZWQ0 6874 aaKnown RBP5.3□□□□□ -1.56
Rnf4-207ENSMUST00000182709 Lce1gQ9D195 139 aa5.3□□□□□ -1.56
Rnf4-207ENSMUST00000182709 Krtap4-1Q3UUY3 169 aa5.29□□□□□ -1.56
Rnf4-207ENSMUST00000182709 Lce1dQ9D731 133 aa5.2□□□□□ -1.58
Rnf4-207ENSMUST00000182709 Gm10272F7CZ33 110 aa5.19□□□□□ -1.58
Rnf4-207ENSMUST00000182709 Krtap31-1Q9D644 177 aa5.19□□□□□ -1.58
Rnf4-207ENSMUST00000182709 Gm11596B1AQB0 205 aa5.18□□□□□ -1.58
Rnf4-207ENSMUST00000182709 Gm11555B1AQ89 175 aa5.18□□□□□ -1.58
Rnf4-207ENSMUST00000182709 Mt4P47945 62 aa5.11□□□□□ -1.59
Rnf4-207ENSMUST00000182709 Gm11564A2A4L9 201 aa5.1□□□□□ -1.59
Rnf4-207ENSMUST00000182709 Gm11563B1AQ90 168 aa5.1□□□□□ -1.59
Rnf4-207ENSMUST00000182709 Gm11595B1AQA7 289 aa5.1□□□□□ -1.59
Rnf4-207ENSMUST00000182709 Krtap4-8B1AQA8 209 aa5.1□□□□□ -1.59
Rnf4-207ENSMUST00000182709 Gm38119A0A0A6YX29 146 aa5.06□□□□□ -1.6
Rnf4-207ENSMUST00000182709 Krtap4-9B1AQA9 244 aa5.02□□□□□ -1.61
Rnf4-207ENSMUST00000182709 4933428G20RikQ9D3X4 101 aa5.01□□□□□ -1.61
Rnf4-207ENSMUST00000182709 Syne1Q6ZWR6 8799 aa5.01□□□□□ -1.61
Rnf4-207ENSMUST00000182709 Lce1eQ9D139 143 aa4.99□□□□□ -1.61
Rnf4-207ENSMUST00000182709 Sprr2gO70558 76 aa4.97□□□□□ -1.61
Rnf4-207ENSMUST00000182709 Gm11938Q9D3H4 131 aa4.93□□□□□ -1.62
Rnf4-207ENSMUST00000182709 A0A1Y7VJH8 109 aa4.9□□□□□ -1.62
Rnf4-207ENSMUST00000182709 Krtap31-2Q8CAY5 177 aa4.9□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 74.6 ms