RNA–Protein interactions for RNA: ENSMUST00000180353.1

Sox1-201, Transcript of Transcription factor SOX-1, mousemouse

APPRIS P1 BASIC

Gene Sox1, Length 4,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1-201ENSMUST00000180353 Dync2h1Q45VK7 4306 aa9.09□□□□□ -0.95
Sox1-201ENSMUST00000180353 ApobE9Q414 4505 aa9.07□□□□□ -0.96
Sox1-201ENSMUST00000180353 Dnah2P0C6F1 4456 aa9.06□□□□□ -0.96
Sox1-201ENSMUST00000180353 Dnah3Q8BW94 4083 aa9.06□□□□□ -0.96
Sox1-201ENSMUST00000180353 Kmt2aP55200 3966 aa8.93□□□□□ -0.98
Sox1-201ENSMUST00000180353 PrkdcP97313 4128 aa8.9□□□□□ -0.98
Sox1-201ENSMUST00000180353 SacsQ9JLC8 4582 aa8.87□□□□□ -0.99
Sox1-201ENSMUST00000180353 Dync1h1Q9JHU4 4644 aaKnown RBP8.87□□□□□ -0.99
Sox1-201ENSMUST00000180353 Dnah1E9Q8T7 4250 aa8.86□□□□□ -0.99
Sox1-201ENSMUST00000180353 Ryr1E9PZQ0 5035 aa8.84□□□□□ -0.99
Sox1-201ENSMUST00000180353 Dnah6E9Q0B6 4144 aa8.84□□□□□ -0.99
Sox1-201ENSMUST00000180353 Krtap1-4Q3V2D6 188 aa8.79□□□□□ -1
Sox1-201ENSMUST00000180353 Hectd4E9Q2E4 4418 aa8.79□□□□□ -1
Sox1-201ENSMUST00000180353 Mycbp2Q7TPH6 4711 aa8.7□□□□□ -1.02
Sox1-201ENSMUST00000180353 Krtap19-9aF8WH65 55 aa8.67□□□□□ -1.02
Sox1-201ENSMUST00000180353 Lrp1Q91ZX7 4545 aaKnown RBP8.65□□□□□ -1.02
Sox1-201ENSMUST00000180353 Krtap19-9bQ99NG9 58 aa8.63□□□□□ -1.03
Sox1-201ENSMUST00000180353 Gm18596A0A1W2P860 280 aa8.6□□□□□ -1.03
Sox1-201ENSMUST00000180353 Dnah7cA0A087WR13 4024 aa8.51□□□□□ -1.05
Sox1-201ENSMUST00000180353 Krtap12-1Q9Z287 130 aa8.5□□□□□ -1.05
Sox1-201ENSMUST00000180353 LorP18165 486 aa8.49□□□□□ -1.05
Sox1-201ENSMUST00000180353 Ryr3A2AGL3 4863 aa8.49□□□□□ -1.05
Sox1-201ENSMUST00000180353 Fat3Q8BNA6 4555 aa8.49□□□□□ -1.05
Sox1-201ENSMUST00000180353 Vps13bQ80TY5 3993 aa8.48□□□□□ -1.05
Sox1-201ENSMUST00000180353 Fat1A0A1L1SQU7 4645 aa8.47□□□□□ -1.05
Sox1-201ENSMUST00000180353 Pkd1O08852 4293 aa8.43□□□□□ -1.06
Sox1-201ENSMUST00000180353 2310046K23RikA0A0A6YVW6 87 aa8.41□□□□□ -1.06
Sox1-201ENSMUST00000180353 Dnah7aE9Q0T8 4024 aa8.34□□□□□ -1.07
Sox1-201ENSMUST00000180353 Dnah8Q91XQ0 4731 aa8.34□□□□□ -1.07
Sox1-201ENSMUST00000180353 Krtap16-3Q8C1I6 86 aa8.31□□□□□ -1.08
Sox1-201ENSMUST00000180353 Fat2Q5F226 4351 aa8.25□□□□□ -1.09
Sox1-201ENSMUST00000180353 HydinQ80W93 5154 aa8.25□□□□□ -1.09
Sox1-201ENSMUST00000180353 Gm6358A0A087WPH4 74 aa8.25□□□□□ -1.09
Sox1-201ENSMUST00000180353 Fras1Q80T14 4010 aa8.24□□□□□ -1.09
Sox1-201ENSMUST00000180353 Ryr2E9Q401 4966 aaKnown RBP8.22□□□□□ -1.09
Sox1-201ENSMUST00000180353 Krtap19-3Q925H6 87 aa8.21□□□□□ -1.1
Sox1-201ENSMUST00000180353 Krtap8-1O08633 61 aa8.18□□□□□ -1.1
Sox1-201ENSMUST00000180353 Lce1mQ9CR91 182 aa8.18□□□□□ -1.1
Sox1-201ENSMUST00000180353 Kiaa1109A2AAE1 5005 aa8.17□□□□□ -1.1
Sox1-201ENSMUST00000180353 Herc2Q4U2R1 4836 aa8.12□□□□□ -1.11
Sox1-201ENSMUST00000180353 Krtap19-1Q925H2 87 aa8.11□□□□□ -1.11
Sox1-201ENSMUST00000180353 Lrp2A2ARV4 4660 aa8.1□□□□□ -1.11
Sox1-201ENSMUST00000180353 Gm10100J3QK64 120 aa7.85□□□□□ -1.15
Sox1-201ENSMUST00000180353 Krtap9-5A2A5X3 358 aa7.83□□□□□ -1.16
Sox1-201ENSMUST00000180353 Kmt2cQ8BRH4 4903 aa7.83□□□□□ -1.16
Sox1-201ENSMUST00000180353 Sprr2kO70562 68 aa7.75□□□□□ -1.17
Sox1-201ENSMUST00000180353 Lce1jD3YUU5 139 aa7.7□□□□□ -1.18
Sox1-201ENSMUST00000180353 Prm1P02319 51 aa7.69□□□□□ -1.18
Sox1-201ENSMUST00000180353 Gm10272F7CZ33 110 aa7.68□□□□□ -1.18
Sox1-201ENSMUST00000180353 Birc6O88738 4882 aa7.67□□□□□ -1.18
Sox1-201ENSMUST00000180353 Gm10142J3KMP7 120 aa7.67□□□□□ -1.18
Sox1-201ENSMUST00000180353 Abca13Q5SSE9 5034 aa7.6□□□□□ -1.19
Sox1-201ENSMUST00000180353 Pkhd1l1Q80ZA4 4249 aa7.58□□□□□ -1.2
Sox1-201ENSMUST00000180353 Lce3bQ9CQM7 98 aa7.57□□□□□ -1.2
Sox1-201ENSMUST00000180353 Dnhd1D3Z2X2 4750 aa7.56□□□□□ -1.2
Sox1-201ENSMUST00000180353 Krtap1-3A2A588 173 aa7.52□□□□□ -1.21
Sox1-201ENSMUST00000180353 Gm7735D3YX18 52 aa7.52□□□□□ -1.21
Sox1-201ENSMUST00000180353 PcloQ9QYX7 5068 aa7.5□□□□□ -1.21
Sox1-201ENSMUST00000180353 Pkhd1E9PZ36 4059 aa7.49□□□□□ -1.21
Sox1-201ENSMUST00000180353 Krtap19-2Q925I0 141 aa7.49□□□□□ -1.21
Sox1-201ENSMUST00000180353 Sprr2gO70558 76 aa7.47□□□□□ -1.21
Sox1-201ENSMUST00000180353 Mt2P02798 61 aa7.47□□□□□ -1.21
Sox1-201ENSMUST00000180353 Lce3cQ91V05 98 aa7.41□□□□□ -1.22
Sox1-201ENSMUST00000180353 Krtap9-3Q3V2C1 136 aa7.39□□□□□ -1.23
Sox1-201ENSMUST00000180353 Gm9789Q8BIG3 52 aa7.33□□□□□ -1.24
Sox1-201ENSMUST00000180353 Krtap22-2J3QNX6 67 aa7.28□□□□□ -1.24
Sox1-201ENSMUST00000180353 Lce3dE9Q8V1 98 aa7.28□□□□□ -1.24
Sox1-201ENSMUST00000180353 Herc1E9PZP8 4859 aa7.24□□□□□ -1.25
Sox1-201ENSMUST00000180353 Lce3eF8VQJ0 98 aa7.17□□□□□ -1.26
Sox1-201ENSMUST00000180353 Lce3fQ6PAI4 98 aa7.17□□□□□ -1.26
Sox1-201ENSMUST00000180353 Lce3aQ497I5 98 aa7.13□□□□□ -1.27
Sox1-201ENSMUST00000180353 Lce1iQ9D6P5 149 aa7.1□□□□□ -1.27
Sox1-201ENSMUST00000180353 Mdn1A2ANY6 5589 aaKnown RBP7.07□□□□□ -1.28
Sox1-201ENSMUST00000180353 4932415D10RikA0A1W2P6U8 4986 aa7.06□□□□□ -1.28
Sox1-201ENSMUST00000180353 Syne1Q6ZWR6 8799 aa7.04□□□□□ -1.28
Sox1-201ENSMUST00000180353 Krtap19-4Q925H7 84 aa7.03□□□□□ -1.28
Sox1-201ENSMUST00000180353 Lce1a2Q9D1K4 149 aa7.02□□□□□ -1.29
Sox1-201ENSMUST00000180353 Ubr4A2AN08 5180 aa7.02□□□□□ -1.29
Sox1-201ENSMUST00000180353 Gm10061D3Z714 54 aa6.99□□□□□ -1.29
Sox1-201ENSMUST00000180353 Ush2AQ2QI47 5193 aa6.94□□□□□ -1.3
Sox1-201ENSMUST00000180353 Gm11938Q9D3H4 131 aa6.91□□□□□ -1.3
Sox1-201ENSMUST00000180353 Sprr2dO70555 85 aa6.9□□□□□ -1.3
Sox1-201ENSMUST00000180353 Gm11569B1AQB1 180 aa6.86□□□□□ -1.31
Sox1-201ENSMUST00000180353 Lce1hQ9D6R3 140 aa6.85□□□□□ -1.31
Sox1-201ENSMUST00000180353 Sprr2fO70557 76 aa6.84□□□□□ -1.31
Sox1-201ENSMUST00000180353 Krtap17-1A2A5X6 109 aa6.83□□□□□ -1.32
Sox1-201ENSMUST00000180353 Hmcn2A2AJ76 5100 aa6.83□□□□□ -1.32
Sox1-201ENSMUST00000180353 Fat4Q2PZL6 4981 aa6.8□□□□□ -1.32
Sox1-201ENSMUST00000180353 Sprr2iO70560 76 aa6.8□□□□□ -1.32
Sox1-201ENSMUST00000180353 Krtap31-1Q9D644 177 aa6.78□□□□□ -1.32
Sox1-201ENSMUST00000180353 ZanO88799 5376 aa6.78□□□□□ -1.32
Sox1-201ENSMUST00000180353 Gm38119A0A0A6YX29 146 aa6.74□□□□□ -1.33
Sox1-201ENSMUST00000180353 Rnf213E9Q555 5152 aaKnown RBP6.71□□□□□ -1.34
Sox1-201ENSMUST00000180353 Gm10024A0A0A0MQA4 119 aa6.67□□□□□ -1.34
Sox1-201ENSMUST00000180353 Lce1dQ9D731 133 aa6.66□□□□□ -1.34
Sox1-201ENSMUST00000180353 Sprr2hO70559 108 aa6.63□□□□□ -1.35
Sox1-201ENSMUST00000180353 Krtap4-2B1AQ85 167 aa6.6□□□□□ -1.35
Sox1-201ENSMUST00000180353 Lce1gQ9D195 139 aa6.56□□□□□ -1.36
Sox1-201ENSMUST00000180353 Lce1fB9EJP6 147 aa6.48□□□□□ -1.37
Sox1-201ENSMUST00000180353 Krtap4-6Q3V4B7 195 aa6.48□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms