RNA–Protein interactions for RNA: ENSMUST00000131537.8

Lig3-204, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-204ENSMUST00000131537 Pet100P0DJE0 76 aa9.5□□□□□ -0.89
Lig3-204ENSMUST00000131537 SspoQ8CG65 4998 aa9.46□□□□□ -0.89
Lig3-204ENSMUST00000131537 Gm17606F6ZL36 78 aa9.46□□□□□ -0.9
Lig3-204ENSMUST00000131537 Tmem258P61166 79 aa9.46□□□□□ -0.9
Lig3-204ENSMUST00000131537 Gm20661K7N787 53 aa9.43□□□□□ -0.9
Lig3-204ENSMUST00000131537 Smim20D3Z7Q2 69 aa9.42□□□□□ -0.9
Lig3-204ENSMUST00000131537 Gm19935A0A1B0GSF9 52 aa9.37□□□□□ -0.91
Lig3-204ENSMUST00000131537 Cdc42se1Q8BHL7 80 aa9.37□□□□□ -0.91
Lig3-204ENSMUST00000131537 Gm19426M0QWC7 77 aa9.34□□□□□ -0.91
Lig3-204ENSMUST00000131537 Gm10382Q3V0T5 144 aa9.32□□□□□ -0.92
Lig3-204ENSMUST00000131537 Gm11569B1AQB1 180 aa9.3□□□□□ -0.92
Lig3-204ENSMUST00000131537 Gm10197F6QEY5 67 aa9.29□□□□□ -0.92
Lig3-204ENSMUST00000131537 H2al1aQ5M8Q2 105 aa9.27□□□□□ -0.92
Lig3-204ENSMUST00000131537 H2al1eQ810S6 105 aa9.27□□□□□ -0.92
Lig3-204ENSMUST00000131537 BC029722A0A0N4SW31 51 aa9.27□□□□□ -0.93
Lig3-204ENSMUST00000131537 Gm20537G3UYK7 97 aa9.19□□□□□ -0.94
Lig3-204ENSMUST00000131537 Brk1Q91VR8 75 aa9.19□□□□□ -0.94
Lig3-204ENSMUST00000131537 Serp1Q9Z1W5 66 aa9.19□□□□□ -0.94
Lig3-204ENSMUST00000131537 SmcpP15265 143 aa9.17□□□□□ -0.94
Lig3-204ENSMUST00000131537 Phxr4P15974 95 aa9.17□□□□□ -0.94
Lig3-204ENSMUST00000131537 Lce1jD3YUU5 139 aa9.16□□□□□ -0.94
Lig3-204ENSMUST00000131537 Krtap12-1Q9Z287 130 aa9.12□□□□□ -0.95
Lig3-204ENSMUST00000131537 Uqcr11Q9CPX8 56 aa9.09□□□□□ -0.95
Lig3-204ENSMUST00000131537 H2al1bA0A087WP11 105 aa9.08□□□□□ -0.96
Lig3-204ENSMUST00000131537 Krtap17-1A2A5X6 109 aa9.08□□□□□ -0.96
Lig3-204ENSMUST00000131537 Krtap9-5A2A5X3 358 aa9.07□□□□□ -0.96
Lig3-204ENSMUST00000131537 Krtap19-2Q925I0 141 aa9.07□□□□□ -0.96
Lig3-204ENSMUST00000131537 Limd2Q8BGB5 128 aa9.05□□□□□ -0.96
Lig3-204ENSMUST00000131537 Sec61gP60060 68 aa9.01□□□□□ -0.97
Lig3-204ENSMUST00000131537 Spink7Q6IE32 76 aa8.97□□□□□ -0.97
Lig3-204ENSMUST00000131537 B930094E09RikQ8C4T2 136 aa8.97□□□□□ -0.97
Lig3-204ENSMUST00000131537 Rps28P62858 69 aaKnown RBP8.96□□□□□ -0.97
Lig3-204ENSMUST00000131537 CriptO70333 101 aa8.95□□□□□ -0.98
Lig3-204ENSMUST00000131537 Krtap19-9aF8WH65 55 aa8.94□□□□□ -0.98
Lig3-204ENSMUST00000131537 Ndufb1P0DN34 57 aa8.91□□□□□ -0.98
Lig3-204ENSMUST00000131537 Pla2g10Q9QXX3 151 aa8.91□□□□□ -0.98
Lig3-204ENSMUST00000131537 Krtap4-2B1AQ85 167 aa8.89□□□□□ -0.99
Lig3-204ENSMUST00000131537 Prm2P07978 107 aa8.89□□□□□ -0.99
Lig3-204ENSMUST00000131537 Gm11562A0PK51 136 aa8.84□□□□□ -1
Lig3-204ENSMUST00000131537 Gm9955Q8CEJ8 102 aa8.83□□□□□ -1
Lig3-204ENSMUST00000131537 Lce1gQ9D195 139 aa8.81□□□□□ -1
Lig3-204ENSMUST00000131537 Muc5bE9Q5I3 4800 aa8.79□□□□□ -1
Lig3-204ENSMUST00000131537 Gm11555B1AQ89 175 aa8.64□□□□□ -1.03
Lig3-204ENSMUST00000131537 Gm6358A0A087WPH4 74 aa8.63□□□□□ -1.03
Lig3-204ENSMUST00000131537 Sprr2a3Q4KL71 83 aa8.63□□□□□ -1.03
Lig3-204ENSMUST00000131537 Sprr2a1Q9CQK8 83 aa8.63□□□□□ -1.03
Lig3-204ENSMUST00000131537 Gm17402F6Z0L5 76 aa8.61□□□□□ -1.03
Lig3-204ENSMUST00000131537 Lce1iQ9D6P5 149 aa8.59□□□□□ -1.03
Lig3-204ENSMUST00000131537 Syne2Q6ZWQ0 6874 aaKnown RBP8.54□□□□□ -1.04
Lig3-204ENSMUST00000131537 Krtap4-6Q3V4B7 195 aa8.53□□□□□ -1.04
Lig3-204ENSMUST00000131537 Gm11596B1AQB0 205 aa8.51□□□□□ -1.05
Lig3-204ENSMUST00000131537 Mdn1A2ANY6 5589 aaKnown RBP8.48□□□□□ -1.05
Lig3-204ENSMUST00000131537 Lce1a2Q9D1K4 149 aa8.46□□□□□ -1.05
Lig3-204ENSMUST00000131537 Krtap4-1Q3UUY3 169 aa8.37□□□□□ -1.07
Lig3-204ENSMUST00000131537 Pcp4P63054 62 aa8.36□□□□□ -1.07
Lig3-204ENSMUST00000131537 H2al1kJ3QP08 105 aa8.35□□□□□ -1.07
Lig3-204ENSMUST00000131537 4933415A04RikQ9D443 101 aa8.3□□□□□ -1.08
Lig3-204ENSMUST00000131537 Mt2P02798 61 aa8.3□□□□□ -1.08
Lig3-204ENSMUST00000131537 Gm19668J3QMD1 248 aa8.28□□□□□ -1.08
Lig3-204ENSMUST00000131537 Gm3880A0A1B0GSB3 72 aa8.26□□□□□ -1.09
Lig3-204ENSMUST00000131537 Sox16Q62247 57 aa8.26□□□□□ -1.09
Lig3-204ENSMUST00000131537 H2al1mQ9DAD9 105 aa8.2□□□□□ -1.1
Lig3-204ENSMUST00000131537 Gm11564A2A4L9 201 aa8.17□□□□□ -1.1
Lig3-204ENSMUST00000131537 Gm11563B1AQ90 168 aa8.17□□□□□ -1.1
Lig3-204ENSMUST00000131537 Gm11595B1AQA7 289 aa8.17□□□□□ -1.1
Lig3-204ENSMUST00000131537 Krtap4-8B1AQA8 209 aa8.17□□□□□ -1.1
Lig3-204ENSMUST00000131537 Ndufs5Q99LY9 106 aa8.16□□□□□ -1.1
Lig3-204ENSMUST00000131537 Gm21887J3QQ04 176 aa8.09□□□□□ -1.11
Lig3-204ENSMUST00000131537 Krtap8-1O08633 61 aa8.06□□□□□ -1.12
Lig3-204ENSMUST00000131537 Camk2n1Q6QWF9 78 aa8.02□□□□□ -1.13
Lig3-204ENSMUST00000131537 Gm3646F6S692 53 aa7.98□□□□□ -1.13
Lig3-204ENSMUST00000131537 Krtap4-9B1AQA9 244 aa7.93□□□□□ -1.14
Lig3-204ENSMUST00000131537 Gm10337F7DEP7 55 aa7.89□□□□□ -1.15
Lig3-204ENSMUST00000131537 Gm12216A0A1W2P827 62 aa7.88□□□□□ -1.15
Lig3-204ENSMUST00000131537 Krtap22-2J3QNX6 67 aa7.87□□□□□ -1.15
Lig3-204ENSMUST00000131537 Mt4P47945 62 aa7.87□□□□□ -1.15
Lig3-204ENSMUST00000131537 Krtap9-3Q3V2C1 136 aa7.86□□□□□ -1.15
Lig3-204ENSMUST00000131537 Krtap19-9bQ99NG9 58 aa7.86□□□□□ -1.15
Lig3-204ENSMUST00000131537 Romo1P60603 79 aa7.75□□□□□ -1.17
Lig3-204ENSMUST00000131537 Fsip2A2ARZ3 6995 aa7.72□□□□□ -1.17
Lig3-204ENSMUST00000131537 Lce1bQ9D149 137 aa7.64□□□□□ -1.19
Lig3-204ENSMUST00000131537 Krtap4-13Q9D7P3 165 aa7.64□□□□□ -1.19
Lig3-204ENSMUST00000131537 Gm38119A0A0A6YX29 146 aa7.54□□□□□ -1.2
Lig3-204ENSMUST00000131537 Sprr2kO70562 68 aa7.5□□□□□ -1.21
Lig3-204ENSMUST00000131537 2300003K06RikA2A4M0 262 aa7.44□□□□□ -1.22
Lig3-204ENSMUST00000131537 Krtap6-3A0A087WQL6 57 aa7.41□□□□□ -1.22
Lig3-204ENSMUST00000131537 Lce1hQ9D6R3 140 aa7.32□□□□□ -1.24
Lig3-204ENSMUST00000131537 Krtap4-7Q9D732 168 aa7.28□□□□□ -1.24
Lig3-204ENSMUST00000131537 Lce1lQ9D1G7 135 aa7.27□□□□□ -1.25
Lig3-204ENSMUST00000131537 Krtap7-1Q9D3I6 87 aa7.27□□□□□ -1.25
Lig3-204ENSMUST00000131537 Tnp1P10856 55 aa7.04□□□□□ -1.28
Lig3-204ENSMUST00000131537 Gm40193A0A1B0GT39 78 aa7.01□□□□□ -1.29
Lig3-204ENSMUST00000131537 Gm10272F7CZ33 110 aa6.97□□□□□ -1.29
Lig3-204ENSMUST00000131537 Lce1dQ9D731 133 aa6.97□□□□□ -1.29
Lig3-204ENSMUST00000131537 Sprr2gO70558 76 aa6.97□□□□□ -1.29
Lig3-204ENSMUST00000131537 Lce1a1Q9CQH5 143 aa6.85□□□□□ -1.31
Lig3-204ENSMUST00000131537 A0A1Y7VJH8 109 aa6.84□□□□□ -1.31
Lig3-204ENSMUST00000131537 Krtap20-2E9Q0A8 60 aa6.8□□□□□ -1.32
Lig3-204ENSMUST00000131537 Syne1Q6ZWR6 8799 aa6.79□□□□□ -1.32
Lig3-204ENSMUST00000131537 SvipQ3UZP4 77 aa6.79□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms