RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Gm10061D3Z714 54 aa14.89□□□□□ -0.03
Ctdnep1-201ENSMUST00000108593 Smim20D3Z7Q2 69 aa14.7□□□□□ -0.06
Ctdnep1-201ENSMUST00000108593 Defb1P56386 69 aa14.68□□□□□ -0.06
Ctdnep1-201ENSMUST00000108593 Cdc42se1Q8BHL7 80 aa14.67□□□□□ -0.06
Ctdnep1-201ENSMUST00000108593 SspoQ8CG65 4998 aa14.66□□□□□ -0.06
Ctdnep1-201ENSMUST00000108593 Serp1Q9Z1W5 66 aa14.66□□□□□ -0.06
Ctdnep1-201ENSMUST00000108593 Krtap3-1A2A591 98 aa14.63□□□□□ -0.07
Ctdnep1-201ENSMUST00000108593 Rps28P62858 69 aaKnown RBP14.57□□□□□ -0.08
Ctdnep1-201ENSMUST00000108593 Brk1Q91VR8 75 aa14.56□□□□□ -0.08
Ctdnep1-201ENSMUST00000108593 Cox6b2Q80ZN9 88 aa14.55□□□□□ -0.08
Ctdnep1-201ENSMUST00000108593 Pcp4P63054 62 aa14.51□□□□□ -0.09
Ctdnep1-201ENSMUST00000108593 SptssbQ925E8 76 aa14.51□□□□□ -0.09
Ctdnep1-201ENSMUST00000108593 Gm11569B1AQB1 180 aa14.41□□□□□ -0.1
Ctdnep1-201ENSMUST00000108593 Gm10197F6QEY5 67 aa14.41□□□□□ -0.1
Ctdnep1-201ENSMUST00000108593 Gm17606F6ZL36 78 aa14.4□□□□□ -0.1
Ctdnep1-201ENSMUST00000108593 Gm11563B1AQ90 168 aa14.37□□□□□ -0.11
Ctdnep1-201ENSMUST00000108593 Krtap4-7Q9D732 168 aa14.37□□□□□ -0.11
Ctdnep1-201ENSMUST00000108593 Gm20661K7N787 53 aa14.35□□□□□ -0.11
Ctdnep1-201ENSMUST00000108593 Gm19426M0QWC7 77 aa14.3□□□□□ -0.12
Ctdnep1-201ENSMUST00000108593 Phxr4P15974 95 aa14.3□□□□□ -0.12
Ctdnep1-201ENSMUST00000108593 H2al1aQ5M8Q2 105 aa14.26□□□□□ -0.13
Ctdnep1-201ENSMUST00000108593 H2al1eQ810S6 105 aa14.26□□□□□ -0.13
Ctdnep1-201ENSMUST00000108593 BC029722A0A0N4SW31 51 aa14.15□□□□□ -0.14
Ctdnep1-201ENSMUST00000108593 Gm20537G3UYK7 97 aa14.13□□□□□ -0.15
Ctdnep1-201ENSMUST00000108593 Gm11555B1AQ89 175 aa14.1□□□□□ -0.15
Ctdnep1-201ENSMUST00000108593 Gm10382Q3V0T5 144 aa14.09□□□□□ -0.15
Ctdnep1-201ENSMUST00000108593 H2al1bA0A087WP11 105 aa14.04□□□□□ -0.16
Ctdnep1-201ENSMUST00000108593 Uqcr11Q9CPX8 56 aa14.01□□□□□ -0.17
Ctdnep1-201ENSMUST00000108593 Krtap12-1Q9Z287 130 aa14□□□□□ -0.17
Ctdnep1-201ENSMUST00000108593 Lce1jD3YUU5 139 aa13.98□□□□□ -0.17
Ctdnep1-201ENSMUST00000108593 Gm11562A0PK51 136 aa13.96□□□□□ -0.17
Ctdnep1-201ENSMUST00000108593 Krtap19-2Q925I0 141 aa13.94□□□□□ -0.18
Ctdnep1-201ENSMUST00000108593 Ndufb1P0DN34 57 aa13.92□□□□□ -0.18
Ctdnep1-201ENSMUST00000108593 Limd2Q8BGB5 128 aa13.92□□□□□ -0.18
Ctdnep1-201ENSMUST00000108593 B930094E09RikQ8C4T2 136 aa13.92□□□□□ -0.18
Ctdnep1-201ENSMUST00000108593 Krtap9-5A2A5X3 358 aa13.9□□□□□ -0.18
Ctdnep1-201ENSMUST00000108593 Krtap4-2B1AQ85 167 aa13.82□□□□□ -0.2
Ctdnep1-201ENSMUST00000108593 CriptO70333 101 aa13.8□□□□□ -0.2
Ctdnep1-201ENSMUST00000108593 Krtap17-1A2A5X6 109 aa13.75□□□□□ -0.21
Ctdnep1-201ENSMUST00000108593 Krtap19-9aF8WH65 55 aa13.72□□□□□ -0.21
Ctdnep1-201ENSMUST00000108593 Lce1gQ9D195 139 aa13.71□□□□□ -0.22
Ctdnep1-201ENSMUST00000108593 Spink7Q6IE32 76 aa13.65□□□□□ -0.22
Ctdnep1-201ENSMUST00000108593 Pla2g10Q9QXX3 151 aa13.64□□□□□ -0.23
Ctdnep1-201ENSMUST00000108593 Sec61gP60060 68 aa13.61□□□□□ -0.23
Ctdnep1-201ENSMUST00000108593 Muc5bE9Q5I3 4800 aa13.58□□□□□ -0.24
Ctdnep1-201ENSMUST00000108593 Prm2P07978 107 aa13.57□□□□□ -0.24
Ctdnep1-201ENSMUST00000108593 Sox16Q62247 57 aa13.46□□□□□ -0.25
Ctdnep1-201ENSMUST00000108593 Gm9955Q8CEJ8 102 aa13.37□□□□□ -0.27
Ctdnep1-201ENSMUST00000108593 4933415A04RikQ9D443 101 aa13.35□□□□□ -0.27
Ctdnep1-201ENSMUST00000108593 Gm10337F7DEP7 55 aa13.3□□□□□ -0.28
Ctdnep1-201ENSMUST00000108593 Gm6358A0A087WPH4 74 aa13.29□□□□□ -0.28
Ctdnep1-201ENSMUST00000108593 Syne2Q6ZWQ0 6874 aaKnown RBP13.29□□□□□ -0.28
Ctdnep1-201ENSMUST00000108593 H2al1kJ3QP08 105 aa13.23□□□□□ -0.29
Ctdnep1-201ENSMUST00000108593 H2al1mQ9DAD9 105 aa13.23□□□□□ -0.29
Ctdnep1-201ENSMUST00000108593 Gm11596B1AQB0 205 aa13.21□□□□□ -0.29
Ctdnep1-201ENSMUST00000108593 Krtap4-6Q3V4B7 195 aa13.2□□□□□ -0.3
Ctdnep1-201ENSMUST00000108593 Gm17402F6Z0L5 76 aa13.18□□□□□ -0.3
Ctdnep1-201ENSMUST00000108593 Sprr2a3Q4KL71 83 aa13.15□□□□□ -0.3
Ctdnep1-201ENSMUST00000108593 Sprr2a1Q9CQK8 83 aa13.15□□□□□ -0.3
Ctdnep1-201ENSMUST00000108593 Lce1iQ9D6P5 149 aa13.11□□□□□ -0.31
Ctdnep1-201ENSMUST00000108593 Mdn1A2ANY6 5589 aaKnown RBP13.07□□□□□ -0.32
Ctdnep1-201ENSMUST00000108593 Lce1a2Q9D1K4 149 aa12.9□□□□□ -0.34
Ctdnep1-201ENSMUST00000108593 Gm3646F6S692 53 aa12.84□□□□□ -0.35
Ctdnep1-201ENSMUST00000108593 SvipQ3UZP4 77 aa12.8□□□□□ -0.36
Ctdnep1-201ENSMUST00000108593 Ndufs5Q99LY9 106 aa12.77□□□□□ -0.36
Ctdnep1-201ENSMUST00000108593 Mt2P02798 61 aa12.73□□□□□ -0.37
Ctdnep1-201ENSMUST00000108593 Gm11564A2A4L9 201 aa12.64□□□□□ -0.39
Ctdnep1-201ENSMUST00000108593 Gm11595B1AQA7 289 aa12.64□□□□□ -0.39
Ctdnep1-201ENSMUST00000108593 Krtap4-8B1AQA8 209 aa12.64□□□□□ -0.39
Ctdnep1-201ENSMUST00000108593 Gm19668J3QMD1 248 aa12.62□□□□□ -0.39
Ctdnep1-201ENSMUST00000108593 Gm3880A0A1B0GSB3 72 aa12.57□□□□□ -0.4
Ctdnep1-201ENSMUST00000108593 Krtap8-1O08633 61 aa12.42□□□□□ -0.42
Ctdnep1-201ENSMUST00000108593 Krtap4-9B1AQA9 244 aa12.27□□□□□ -0.44
Ctdnep1-201ENSMUST00000108593 Gm21887J3QQ04 176 aa12.25□□□□□ -0.45
Ctdnep1-201ENSMUST00000108593 Krtap9-3Q3V2C1 136 aa12.22□□□□□ -0.45
Ctdnep1-201ENSMUST00000108593 Camk2n1Q6QWF9 78 aa12.15□□□□□ -0.46
Ctdnep1-201ENSMUST00000108593 Mt4P47945 62 aa12.15□□□□□ -0.47
Ctdnep1-201ENSMUST00000108593 Krtap22-2J3QNX6 67 aa12.12□□□□□ -0.47
Ctdnep1-201ENSMUST00000108593 Gm12216A0A1W2P827 62 aa12.08□□□□□ -0.48
Ctdnep1-201ENSMUST00000108593 Krtap19-9bQ99NG9 58 aa12.02□□□□□ -0.49
Ctdnep1-201ENSMUST00000108593 Fsip2A2ARZ3 6995 aa11.98□□□□□ -0.49
Ctdnep1-201ENSMUST00000108593 Romo1P60603 79 aa11.97□□□□□ -0.49
Ctdnep1-201ENSMUST00000108593 Lce1bQ9D149 137 aa11.88□□□□□ -0.51
Ctdnep1-201ENSMUST00000108593 Krtap4-13Q9D7P3 165 aa11.8□□□□□ -0.52
Ctdnep1-201ENSMUST00000108593 Krtap6-3A0A087WQL6 57 aa11.6□□□□□ -0.55
Ctdnep1-201ENSMUST00000108593 Sprr2kO70562 68 aa11.6□□□□□ -0.55
Ctdnep1-201ENSMUST00000108593 Gm38119A0A0A6YX29 146 aa11.56□□□□□ -0.56
Ctdnep1-201ENSMUST00000108593 2300003K06RikA2A4M0 262 aa11.48□□□□□ -0.57
Ctdnep1-201ENSMUST00000108593 Lce1lQ9D1G7 135 aa11.24□□□□□ -0.61
Ctdnep1-201ENSMUST00000108593 Lce1hQ9D6R3 140 aa11.06□□□□□ -0.64
Ctdnep1-201ENSMUST00000108593 Krtap7-1Q9D3I6 87 aa11.04□□□□□ -0.64
Ctdnep1-201ENSMUST00000108593 Sprr2gO70558 76 aa10.84□□□□□ -0.67
Ctdnep1-201ENSMUST00000108593 Gm40193A0A1B0GT39 78 aa10.82□□□□□ -0.68
Ctdnep1-201ENSMUST00000108593 Lce1dQ9D731 133 aa10.7□□□□□ -0.7
Ctdnep1-201ENSMUST00000108593 Tnp1P10856 55 aa10.66□□□□□ -0.7
Ctdnep1-201ENSMUST00000108593 Lce1a1Q9CQH5 143 aa10.64□□□□□ -0.71
Ctdnep1-201ENSMUST00000108593 A0A1Y7VJH8 109 aa10.63□□□□□ -0.71
Ctdnep1-201ENSMUST00000108593 Krtap20-2E9Q0A8 60 aa10.61□□□□□ -0.71
Ctdnep1-201ENSMUST00000108593 Gm10272F7CZ33 110 aa10.6□□□□□ -0.71
Ctdnep1-201ENSMUST00000108593 Krtap31-2Q8CAY5 177 aa10.48□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 170.9 ms