RNA–Protein interactions for RNA: ENSMUST00000106619.7

Ttc39a-203, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

TSL 1 (best) BASIC

Gene Ttc39a, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-203ENSMUST00000106619 Fam229aB2KGE5 128 aa9.55□□□□□ -0.88
Ttc39a-203ENSMUST00000106619 Krtap1-3A2A588 173 aa9.54□□□□□ -0.88
Ttc39a-203ENSMUST00000106619 Krtap13-1Q8K198 168 aa9.54□□□□□ -0.88
Ttc39a-203ENSMUST00000106619 Krtap19-3Q925H6 87 aa9.52□□□□□ -0.89
Ttc39a-203ENSMUST00000106619 Uqcr11Q9CPX8 56 aa9.5□□□□□ -0.89
Ttc39a-203ENSMUST00000106619 H2al1bA0A087WP11 105 aa9.49□□□□□ -0.89
Ttc39a-203ENSMUST00000106619 Krtap3-1A2A591 98 aa9.45□□□□□ -0.9
Ttc39a-203ENSMUST00000106619 Limd2Q8BGB5 128 aa9.43□□□□□ -0.9
Ttc39a-203ENSMUST00000106619 Gm17606F6ZL36 78 aa9.41□□□□□ -0.9
Ttc39a-203ENSMUST00000106619 ZanO88799 5376 aa9.4□□□□□ -0.9
Ttc39a-203ENSMUST00000106619 Krtap1-5A2A590 122 aa9.4□□□□□ -0.9
Ttc39a-203ENSMUST00000106619 Ndufb1P0DN34 57 aa9.4□□□□□ -0.9
Ttc39a-203ENSMUST00000106619 Gm10318A0A1W2P728 225 aa9.39□□□□□ -0.91
Ttc39a-203ENSMUST00000106619 Gm19402J3QJV4 266 aa9.32□□□□□ -0.92
Ttc39a-203ENSMUST00000106619 Gm10382Q3V0T5 144 aa9.28□□□□□ -0.92
Ttc39a-203ENSMUST00000106619 1700042G07RikB1AUF7 90 aa9.27□□□□□ -0.93
Ttc39a-203ENSMUST00000106619 LorP18165 486 aa9.26□□□□□ -0.93
Ttc39a-203ENSMUST00000106619 Rnf213E9Q555 5152 aaKnown RBP9.25□□□□□ -0.93
Ttc39a-203ENSMUST00000106619 Fat4Q2PZL6 4981 aa9.21□□□□□ -0.94
Ttc39a-203ENSMUST00000106619 Sec61gP60060 68 aa9.2□□□□□ -0.94
Ttc39a-203ENSMUST00000106619 Krtap1-4Q3V2D6 188 aa9.19□□□□□ -0.94
Ttc39a-203ENSMUST00000106619 Gm20537G3UYK7 97 aa9.12□□□□□ -0.95
Ttc39a-203ENSMUST00000106619 BC029722A0A0N4SW31 51 aa9.11□□□□□ -0.95
Ttc39a-203ENSMUST00000106619 Sox16Q62247 57 aa9.04□□□□□ -0.96
Ttc39a-203ENSMUST00000106619 Gm19426M0QWC7 77 aa9□□□□□ -0.97
Ttc39a-203ENSMUST00000106619 Gm9955Q8CEJ8 102 aa8.99□□□□□ -0.97
Ttc39a-203ENSMUST00000106619 4933415A04RikQ9D443 101 aa8.99□□□□□ -0.97
Ttc39a-203ENSMUST00000106619 SspoQ8CG65 4998 aa8.87□□□□□ -0.99
Ttc39a-203ENSMUST00000106619 Gm10337F7DEP7 55 aa8.86□□□□□ -0.99
Ttc39a-203ENSMUST00000106619 H2al1kJ3QP08 105 aa8.83□□□□□ -1
Ttc39a-203ENSMUST00000106619 H2al1mQ9DAD9 105 aa8.83□□□□□ -1
Ttc39a-203ENSMUST00000106619 Gm10061D3Z714 54 aa8.75□□□□□ -1.01
Ttc39a-203ENSMUST00000106619 CriptO70333 101 aa8.75□□□□□ -1.01
Ttc39a-203ENSMUST00000106619 Spink7Q6IE32 76 aa8.71□□□□□ -1.02
Ttc39a-203ENSMUST00000106619 Lce1jD3YUU5 139 aa8.66□□□□□ -1.02
Ttc39a-203ENSMUST00000106619 Gm17402F6Z0L5 76 aa8.66□□□□□ -1.02
Ttc39a-203ENSMUST00000106619 Krtap12-1Q9Z287 130 aa8.66□□□□□ -1.02
Ttc39a-203ENSMUST00000106619 Gm3646F6S692 53 aa8.63□□□□□ -1.03
Ttc39a-203ENSMUST00000106619 Ndufs5Q99LY9 106 aa8.62□□□□□ -1.03
Ttc39a-203ENSMUST00000106619 B930094E09RikQ8C4T2 136 aa8.56□□□□□ -1.04
Ttc39a-203ENSMUST00000106619 Krtap19-9aF8WH65 55 aa8.55□□□□□ -1.04
Ttc39a-203ENSMUST00000106619 Sprr2a3Q4KL71 83 aa8.55□□□□□ -1.04
Ttc39a-203ENSMUST00000106619 Sprr2a1Q9CQK8 83 aa8.55□□□□□ -1.04
Ttc39a-203ENSMUST00000106619 Gm3880A0A1B0GSB3 72 aa8.51□□□□□ -1.05
Ttc39a-203ENSMUST00000106619 Krtap19-2Q925I0 141 aa8.5□□□□□ -1.05
Ttc39a-203ENSMUST00000106619 Krtap9-5A2A5X3 358 aa8.44□□□□□ -1.06
Ttc39a-203ENSMUST00000106619 Krtap17-1A2A5X6 109 aa8.4□□□□□ -1.06
Ttc39a-203ENSMUST00000106619 Prm2P07978 107 aa8.4□□□□□ -1.06
Ttc39a-203ENSMUST00000106619 SvipQ3UZP4 77 aa8.4□□□□□ -1.06
Ttc39a-203ENSMUST00000106619 Gm11569B1AQB1 180 aa8.35□□□□□ -1.07
Ttc39a-203ENSMUST00000106619 Pla2g10Q9QXX3 151 aa8.35□□□□□ -1.07
Ttc39a-203ENSMUST00000106619 Muc5bE9Q5I3 4800 aa8.22□□□□□ -1.09
Ttc39a-203ENSMUST00000106619 Gm12216A0A1W2P827 62 aa8.18□□□□□ -1.1
Ttc39a-203ENSMUST00000106619 Lce1iQ9D6P5 149 aa8.14□□□□□ -1.11
Ttc39a-203ENSMUST00000106619 Gm19668J3QMD1 248 aa8.12□□□□□ -1.11
Ttc39a-203ENSMUST00000106619 Romo1P60603 79 aa8.1□□□□□ -1.11
Ttc39a-203ENSMUST00000106619 Gm21887J3QQ04 176 aa8.06□□□□□ -1.12
Ttc39a-203ENSMUST00000106619 Gm6358A0A087WPH4 74 aa8.05□□□□□ -1.12
Ttc39a-203ENSMUST00000106619 Krtap4-1Q3UUY3 169 aa8.02□□□□□ -1.13
Ttc39a-203ENSMUST00000106619 Lce1a2Q9D1K4 149 aa8.02□□□□□ -1.13
Ttc39a-203ENSMUST00000106619 Camk2n1Q6QWF9 78 aa7.97□□□□□ -1.13
Ttc39a-203ENSMUST00000106619 Mt2P02798 61 aa7.81□□□□□ -1.16
Ttc39a-203ENSMUST00000106619 Krtap4-2B1AQ85 167 aa7.77□□□□□ -1.17
Ttc39a-203ENSMUST00000106619 Lce1gQ9D195 139 aa7.77□□□□□ -1.17
Ttc39a-203ENSMUST00000106619 Gm11555B1AQ89 175 aa7.75□□□□□ -1.17
Ttc39a-203ENSMUST00000106619 Krtap8-1O08633 61 aa7.72□□□□□ -1.17
Ttc39a-203ENSMUST00000106619 Mdn1A2ANY6 5589 aaKnown RBP7.69□□□□□ -1.18
Ttc39a-203ENSMUST00000106619 Krtap19-9bQ99NG9 58 aa7.66□□□□□ -1.18
Ttc39a-203ENSMUST00000106619 Gm11562A0PK51 136 aa7.64□□□□□ -1.19
Ttc39a-203ENSMUST00000106619 Krtap4-6Q3V4B7 195 aa7.61□□□□□ -1.19
Ttc39a-203ENSMUST00000106619 Syne2Q6ZWQ0 6874 aaKnown RBP7.56□□□□□ -1.2
Ttc39a-203ENSMUST00000106619 Gm11596B1AQB0 205 aa7.52□□□□□ -1.21
Ttc39a-203ENSMUST00000106619 Gm11563B1AQ90 168 aa7.46□□□□□ -1.22
Ttc39a-203ENSMUST00000106619 Krtap4-7Q9D732 168 aa7.46□□□□□ -1.22
Ttc39a-203ENSMUST00000106619 Krtap22-2J3QNX6 67 aa7.41□□□□□ -1.22
Ttc39a-203ENSMUST00000106619 Krtap7-1Q9D3I6 87 aa7.37□□□□□ -1.23
Ttc39a-203ENSMUST00000106619 Gm40193A0A1B0GT39 78 aa7.35□□□□□ -1.23
Ttc39a-203ENSMUST00000106619 Gm11564A2A4L9 201 aa7.28□□□□□ -1.24
Ttc39a-203ENSMUST00000106619 Gm11595B1AQA7 289 aa7.28□□□□□ -1.24
Ttc39a-203ENSMUST00000106619 Krtap4-8B1AQA8 209 aa7.28□□□□□ -1.24
Ttc39a-203ENSMUST00000106619 Krtap9-3Q3V2C1 136 aa7.21□□□□□ -1.25
Ttc39a-203ENSMUST00000106619 Tnp1P10856 55 aa7.16□□□□□ -1.26
Ttc39a-203ENSMUST00000106619 Lce1hQ9D6R3 140 aa7.13□□□□□ -1.27
Ttc39a-203ENSMUST00000106619 Krtap4-9B1AQA9 244 aa7.07□□□□□ -1.28
Ttc39a-203ENSMUST00000106619 Mt4P47945 62 aa7.05□□□□□ -1.28
Ttc39a-203ENSMUST00000106619 Mp68P56379 58 aa7.03□□□□□ -1.28
Ttc39a-203ENSMUST00000106619 Lce1bQ9D149 137 aa6.97□□□□□ -1.29
Ttc39a-203ENSMUST00000106619 Fsip2A2ARZ3 6995 aa6.91□□□□□ -1.3
Ttc39a-203ENSMUST00000106619 2310046K23RikA0A0A6YVW6 87 aa6.81□□□□□ -1.32
Ttc39a-203ENSMUST00000106619 Krtap4-13Q9D7P3 165 aa6.8□□□□□ -1.32
Ttc39a-203ENSMUST00000106619 Gm38119A0A0A6YX29 146 aa6.8□□□□□ -1.32
Ttc39a-203ENSMUST00000106619 Gm10272F7CZ33 110 aa6.7□□□□□ -1.34
Ttc39a-203ENSMUST00000106619 2300003K06RikA2A4M0 262 aa6.69□□□□□ -1.34
Ttc39a-203ENSMUST00000106619 Sprr2kO70562 68 aa6.69□□□□□ -1.34
Ttc39a-203ENSMUST00000106619 A0A1Y7VJH8 109 aa6.61□□□□□ -1.35
Ttc39a-203ENSMUST00000106619 Krtap6-3A0A087WQL6 57 aa6.57□□□□□ -1.36
Ttc39a-203ENSMUST00000106619 Syne1Q6ZWR6 8799 aa6.43□□□□□ -1.38
Ttc39a-203ENSMUST00000106619 Lce1lQ9D1G7 135 aa6.42□□□□□ -1.38
Ttc39a-203ENSMUST00000106619 Lce3bQ9CQM7 98 aa6.41□□□□□ -1.38
Ttc39a-203ENSMUST00000106619 Gm11938Q9D3H4 131 aa6.4□□□□□ -1.38
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms