RNA–Protein interactions for RNA: ENSMUST00000101616.8

Smarca1-203, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarca1, Length 3,991 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-203ENSMUST00000101616 Vps13bQ80TY5 3993 aa4.15□□□□□ -1.74
Smarca1-203ENSMUST00000101616 Pkd1O08852 4293 aa4.15□□□□□ -1.75
Smarca1-203ENSMUST00000101616 Gm10318A0A1W2P728 225 aa4.08□□□□□ -1.76
Smarca1-203ENSMUST00000101616 Gm17416Q30KP4 66 aa4.07□□□□□ -1.76
Smarca1-203ENSMUST00000101616 Tnp1P10856 55 aa4.07□□□□□ -1.76
Smarca1-203ENSMUST00000101616 Fat2Q5F226 4351 aa4.06□□□□□ -1.76
Smarca1-203ENSMUST00000101616 2210017I01RikA0A0A6YVV1 95 aa4.06□□□□□ -1.76
Smarca1-203ENSMUST00000101616 Stard9Q80TF6 4561 aa4.04□□□□□ -1.76
Smarca1-203ENSMUST00000101616 A0A1Y7VJH8 109 aa4.01□□□□□ -1.77
Smarca1-203ENSMUST00000101616 Lrp1bQ9JI18 4599 aa4.01□□□□□ -1.77
Smarca1-203ENSMUST00000101616 A0A1Y7VLE6 161 aa4□□□□□ -1.77
Smarca1-203ENSMUST00000101616 Krtap3-1A2A591 98 aa3.99□□□□□ -1.77
Smarca1-203ENSMUST00000101616 SacsQ9JLC8 4582 aa3.98□□□□□ -1.77
Smarca1-203ENSMUST00000101616 Krtap28-10A0A1Y7VP58 119 aa3.98□□□□□ -1.77
Smarca1-203ENSMUST00000101616 Krtap13-1Q8K198 168 aa3.95□□□□□ -1.78
Smarca1-203ENSMUST00000101616 Lrp1Q91ZX7 4545 aaKnown RBP3.94□□□□□ -1.78
Smarca1-203ENSMUST00000101616 Crct1Q6PAI5 102 aa3.93□□□□□ -1.78
Smarca1-203ENSMUST00000101616 Krtap19-5O08632 62 aa3.92□□□□□ -1.78
Smarca1-203ENSMUST00000101616 Gm17402F6Z0L5 76 aa3.89□□□□□ -1.79
Smarca1-203ENSMUST00000101616 Fat3Q8BNA6 4555 aa3.88□□□□□ -1.79
Smarca1-203ENSMUST00000101616 Krtap7-1Q9D3I6 87 aa3.87□□□□□ -1.79
Smarca1-203ENSMUST00000101616 Gm19668J3QMD1 248 aa3.85□□□□□ -1.79
Smarca1-203ENSMUST00000101616 Fat1A0A1L1SQU7 4645 aa3.85□□□□□ -1.79
Smarca1-203ENSMUST00000101616 Krtap4-2B1AQ85 167 aa3.83□□□□□ -1.8
Smarca1-203ENSMUST00000101616 Krtap28-13A0A087WQP5 138 aa3.8□□□□□ -1.8
Smarca1-203ENSMUST00000101616 Lce1mQ9CR91 182 aa3.8□□□□□ -1.8
Smarca1-203ENSMUST00000101616 Dync1h1Q9JHU4 4644 aaKnown RBP3.8□□□□□ -1.8
Smarca1-203ENSMUST00000101616 Kmt2cQ8BRH4 4903 aa3.77□□□□□ -1.81
Smarca1-203ENSMUST00000101616 Ryr2E9Q401 4966 aaKnown RBP3.77□□□□□ -1.81
Smarca1-203ENSMUST00000101616 Gm19402J3QJV4 266 aa3.76□□□□□ -1.81
Smarca1-203ENSMUST00000101616 Ryr3A2AGL3 4863 aa3.75□□□□□ -1.81
Smarca1-203ENSMUST00000101616 A030005L19RikA0A1Y7VIU2 113 aa3.75□□□□□ -1.81
Smarca1-203ENSMUST00000101616 Lrp2A2ARV4 4660 aa3.7□□□□□ -1.82
Smarca1-203ENSMUST00000101616 HydinQ80W93 5154 aa3.69□□□□□ -1.82
Smarca1-203ENSMUST00000101616 Dnhd1D3Z2X2 4750 aa3.69□□□□□ -1.82
Smarca1-203ENSMUST00000101616 Mycbp2Q7TPH6 4711 aa3.68□□□□□ -1.82
Smarca1-203ENSMUST00000101616 Ryr1E9PZQ0 5035 aa3.66□□□□□ -1.82
Smarca1-203ENSMUST00000101616 A030005K14RikA0A1Y7VNY1 122 aa3.66□□□□□ -1.82
Smarca1-203ENSMUST00000101616 Sprr2a3Q4KL71 83 aa3.64□□□□□ -1.83
Smarca1-203ENSMUST00000101616 Sprr2a1Q9CQK8 83 aa3.64□□□□□ -1.83
Smarca1-203ENSMUST00000101616 Dnah8Q91XQ0 4731 aa3.62□□□□□ -1.83
Smarca1-203ENSMUST00000101616 Krtap1-5A2A590 122 aa3.57□□□□□ -1.84
Smarca1-203ENSMUST00000101616 Gm7544A0A1Y7VJ58 118 aa3.56□□□□□ -1.84
Smarca1-203ENSMUST00000101616 Abca13Q5SSE9 5034 aa3.56□□□□□ -1.84
Smarca1-203ENSMUST00000101616 A030003K21RikA0A1Y7VIM3 128 aa3.54□□□□□ -1.84
Smarca1-203ENSMUST00000101616 4933428G20RikQ9D3X4 101 aa3.5□□□□□ -1.85
Smarca1-203ENSMUST00000101616 A0A1Y7VJ07 166 aa3.47□□□□□ -1.85
Smarca1-203ENSMUST00000101616 Krtap1-4Q3V2D6 188 aa3.47□□□□□ -1.85
Smarca1-203ENSMUST00000101616 Kiaa1109A2AAE1 5005 aa3.47□□□□□ -1.85
Smarca1-203ENSMUST00000101616 Birc6O88738 4882 aa3.45□□□□□ -1.86
Smarca1-203ENSMUST00000101616 LorP18165 486 aa3.39□□□□□ -1.87
Smarca1-203ENSMUST00000101616 Krtap19-9aF8WH65 55 aa3.39□□□□□ -1.87
Smarca1-203ENSMUST00000101616 Herc2Q4U2R1 4836 aa3.37□□□□□ -1.87
Smarca1-203ENSMUST00000101616 Gm6358A0A087WPH4 74 aa3.36□□□□□ -1.87
Smarca1-203ENSMUST00000101616 Ubr4A2AN08 5180 aa3.35□□□□□ -1.87
Smarca1-203ENSMUST00000101616 Krtap12-1Q9Z287 130 aa3.34□□□□□ -1.88
Smarca1-203ENSMUST00000101616 Krtap19-9bQ99NG9 58 aa3.32□□□□□ -1.88
Smarca1-203ENSMUST00000101616 Krtap16-3Q8C1I6 86 aa3.31□□□□□ -1.88
Smarca1-203ENSMUST00000101616 PcloQ9QYX7 5068 aa3.3□□□□□ -1.88
Smarca1-203ENSMUST00000101616 Gm6217A0A1Y7VJK9 128 aa3.29□□□□□ -1.88
Smarca1-203ENSMUST00000101616 Fat4Q2PZL6 4981 aa3.29□□□□□ -1.88
Smarca1-203ENSMUST00000101616 Syne1Q6ZWR6 8799 aa3.28□□□□□ -1.88
Smarca1-203ENSMUST00000101616 A030014E15RikA0A1Y7VJV2 120 aa3.26□□□□□ -1.89
Smarca1-203ENSMUST00000101616 Krtap19-3Q925H6 87 aa3.25□□□□□ -1.89
Smarca1-203ENSMUST00000101616 Gm38119A0A0A6YX29 146 aa3.22□□□□□ -1.89
Smarca1-203ENSMUST00000101616 Krtap19-1Q925H2 87 aa3.21□□□□□ -1.9
Smarca1-203ENSMUST00000101616 Ush2AQ2QI47 5193 aa3.19□□□□□ -1.9
Smarca1-203ENSMUST00000101616 ZanO88799 5376 aa3.15□□□□□ -1.9
Smarca1-203ENSMUST00000101616 Lce1jD3YUU5 139 aa3.15□□□□□ -1.91
Smarca1-203ENSMUST00000101616 Krtap8-1O08633 61 aa3.14□□□□□ -1.91
Smarca1-203ENSMUST00000101616 Herc1E9PZP8 4859 aa3.14□□□□□ -1.91
Smarca1-203ENSMUST00000101616 Hmcn2A2AJ76 5100 aa3.12□□□□□ -1.91
Smarca1-203ENSMUST00000101616 2310046K23RikA0A0A6YVW6 87 aa3.12□□□□□ -1.91
Smarca1-203ENSMUST00000101616 Muc16A0A140LJ72 8478 aa3.1□□□□□ -1.91
Smarca1-203ENSMUST00000101616 Krtap9-5A2A5X3 358 aa3.1□□□□□ -1.91
Smarca1-203ENSMUST00000101616 Gm18596A0A1W2P860 280 aa3.09□□□□□ -1.91
Smarca1-203ENSMUST00000101616 Mdn1A2ANY6 5589 aaKnown RBP3.09□□□□□ -1.91
Smarca1-203ENSMUST00000101616 Rnf213E9Q555 5152 aaKnown RBP3.06□□□□□ -1.92
Smarca1-203ENSMUST00000101616 Gm10100J3QK64 120 aa3.05□□□□□ -1.92
Smarca1-203ENSMUST00000101616 Gm10272F7CZ33 110 aa3.04□□□□□ -1.92
Smarca1-203ENSMUST00000101616 4932415D10RikA0A1W2P6U8 4986 aa3□□□□□ -1.93
Smarca1-203ENSMUST00000101616 Krtap17-1A2A5X6 109 aa2.99□□□□□ -1.93
Smarca1-203ENSMUST00000101616 Mt2P02798 61 aa2.96□□□□□ -1.93
Smarca1-203ENSMUST00000101616 Krtap19-2Q925I0 141 aa2.95□□□□□ -1.94
Smarca1-203ENSMUST00000101616 Lce3bQ9CQM7 98 aa2.95□□□□□ -1.94
Smarca1-203ENSMUST00000101616 Krtap1-3A2A588 173 aa2.94□□□□□ -1.94
Smarca1-203ENSMUST00000101616 Gm10142J3KMP7 120 aa2.94□□□□□ -1.94
Smarca1-203ENSMUST00000101616 Lce1a1Q9CQH5 143 aa2.94□□□□□ -1.94
Smarca1-203ENSMUST00000101616 Lce1gQ9D195 139 aa2.94□□□□□ -1.94
Smarca1-203ENSMUST00000101616 SspoQ8CG65 4998 aa2.93□□□□□ -1.94
Smarca1-203ENSMUST00000101616 Krtap9-3Q3V2C1 136 aa2.92□□□□□ -1.94
Smarca1-203ENSMUST00000101616 Lce3cQ91V05 98 aa2.88□□□□□ -1.95
Smarca1-203ENSMUST00000101616 Lce1iQ9D6P5 149 aa2.87□□□□□ -1.95
Smarca1-203ENSMUST00000101616 Krtap22-2J3QNX6 67 aa2.85□□□□□ -1.95
Smarca1-203ENSMUST00000101616 Lce1hQ9D6R3 140 aa2.85□□□□□ -1.95
Smarca1-203ENSMUST00000101616 Lce1a2Q9D1K4 149 aa2.85□□□□□ -1.95
Smarca1-203ENSMUST00000101616 Lce3dE9Q8V1 98 aa2.83□□□□□ -1.96
Smarca1-203ENSMUST00000101616 Lce1dQ9D731 133 aa2.83□□□□□ -1.96
Smarca1-203ENSMUST00000101616 Lce3eF8VQJ0 98 aa2.82□□□□□ -1.96
Smarca1-203ENSMUST00000101616 Lce3fQ6PAI4 98 aa2.82□□□□□ -1.96
Retrieved 100 of 22,080 RNA–protein pairs in 77.9 ms