RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 Ryr1E9PZQ0 5035 aa5.12□□□□□ -1.59
Col8a1-201ENSMUST00000089332 Dnah9B1AR51 4484 aa5.1□□□□□ -1.59
Col8a1-201ENSMUST00000089332 Krtap7-1Q9D3I6 87 aa5.1□□□□□ -1.59
Col8a1-201ENSMUST00000089332 Dnah7bL7N1Y0 4068 aa5.08□□□□□ -1.6
Col8a1-201ENSMUST00000089332 Sprr2kO70562 68 aa5.06□□□□□ -1.6
Col8a1-201ENSMUST00000089332 Krtap19-9bQ99NG9 58 aa5.06□□□□□ -1.6
Col8a1-201ENSMUST00000089332 Dync2h1Q45VK7 4306 aa5.05□□□□□ -1.6
Col8a1-201ENSMUST00000089332 ApobE9Q414 4505 aa5.03□□□□□ -1.6
Col8a1-201ENSMUST00000089332 Mycbp2Q7TPH6 4711 aa5.03□□□□□ -1.6
Col8a1-201ENSMUST00000089332 Dync1h1Q9JHU4 4644 aaKnown RBP5.03□□□□□ -1.6
Col8a1-201ENSMUST00000089332 SacsQ9JLC8 4582 aa5.02□□□□□ -1.61
Col8a1-201ENSMUST00000089332 TnxbO35452 4006 aa5.02□□□□□ -1.61
Col8a1-201ENSMUST00000089332 Krtap12-1Q9Z287 130 aa5.01□□□□□ -1.61
Col8a1-201ENSMUST00000089332 PrkdcP97313 4128 aa4.99□□□□□ -1.61
Col8a1-201ENSMUST00000089332 Gm19402J3QJV4 266 aa4.99□□□□□ -1.61
Col8a1-201ENSMUST00000089332 Dnah2P0C6F1 4456 aa4.98□□□□□ -1.61
Col8a1-201ENSMUST00000089332 Lrp1bQ9JI18 4599 aa4.97□□□□□ -1.61
Col8a1-201ENSMUST00000089332 Kmt2aP55200 3966 aa4.89□□□□□ -1.63
Col8a1-201ENSMUST00000089332 Ryr3A2AGL3 4863 aa4.85□□□□□ -1.63
Col8a1-201ENSMUST00000089332 Lce1mQ9CR91 182 aa4.82□□□□□ -1.64
Col8a1-201ENSMUST00000089332 Sprr2gO70558 76 aa4.81□□□□□ -1.64
Col8a1-201ENSMUST00000089332 Fat1A0A1L1SQU7 4645 aa4.81□□□□□ -1.64
Col8a1-201ENSMUST00000089332 Dnah6E9Q0B6 4144 aa4.79□□□□□ -1.64
Col8a1-201ENSMUST00000089332 HydinQ80W93 5154 aa4.78□□□□□ -1.64
Col8a1-201ENSMUST00000089332 Dnah3Q8BW94 4083 aa4.78□□□□□ -1.64
Col8a1-201ENSMUST00000089332 Dnah1E9Q8T7 4250 aa4.78□□□□□ -1.64
Col8a1-201ENSMUST00000089332 Krtap16-3Q8C1I6 86 aa4.76□□□□□ -1.65
Col8a1-201ENSMUST00000089332 Lrp1Q91ZX7 4545 aaKnown RBP4.75□□□□□ -1.65
Col8a1-201ENSMUST00000089332 Krtap19-3Q925H6 87 aa4.74□□□□□ -1.65
Col8a1-201ENSMUST00000089332 Kiaa1109A2AAE1 5005 aa4.74□□□□□ -1.65
Col8a1-201ENSMUST00000089332 Pkd1O08852 4293 aa4.74□□□□□ -1.65
Col8a1-201ENSMUST00000089332 Fat3Q8BNA6 4555 aa4.72□□□□□ -1.65
Col8a1-201ENSMUST00000089332 Hectd4E9Q2E4 4418 aa4.72□□□□□ -1.65
Col8a1-201ENSMUST00000089332 Herc2Q4U2R1 4836 aa4.72□□□□□ -1.65
Col8a1-201ENSMUST00000089332 Dnah8Q91XQ0 4731 aa4.68□□□□□ -1.66
Col8a1-201ENSMUST00000089332 Lrp2A2ARV4 4660 aa4.68□□□□□ -1.66
Col8a1-201ENSMUST00000089332 Krtap9-5A2A5X3 358 aa4.65□□□□□ -1.67
Col8a1-201ENSMUST00000089332 Krtap19-1Q925H2 87 aa4.65□□□□□ -1.67
Col8a1-201ENSMUST00000089332 Prm1P02319 51 aa4.64□□□□□ -1.67
Col8a1-201ENSMUST00000089332 Lce3bQ9CQM7 98 aa4.59□□□□□ -1.67
Col8a1-201ENSMUST00000089332 Ryr2E9Q401 4966 aaKnown RBP4.59□□□□□ -1.67
Col8a1-201ENSMUST00000089332 Vps13bQ80TY5 3993 aa4.55□□□□□ -1.68
Col8a1-201ENSMUST00000089332 Fras1Q80T14 4010 aa4.55□□□□□ -1.68
Col8a1-201ENSMUST00000089332 Dnah7cA0A087WR13 4024 aa4.52□□□□□ -1.69
Col8a1-201ENSMUST00000089332 Lce3cQ91V05 98 aa4.51□□□□□ -1.69
Col8a1-201ENSMUST00000089332 Dnhd1D3Z2X2 4750 aa4.51□□□□□ -1.69
Col8a1-201ENSMUST00000089332 Dnah7aE9Q0T8 4024 aa4.48□□□□□ -1.69
Col8a1-201ENSMUST00000089332 Krtap22-2J3QNX6 67 aa4.46□□□□□ -1.69
Col8a1-201ENSMUST00000089332 PcloQ9QYX7 5068 aa4.45□□□□□ -1.7
Col8a1-201ENSMUST00000089332 Gm10272F7CZ33 110 aa4.44□□□□□ -1.7
Col8a1-201ENSMUST00000089332 Fat2Q5F226 4351 aa4.44□□□□□ -1.7
Col8a1-201ENSMUST00000089332 Gm10100J3QK64 120 aa4.43□□□□□ -1.7
Col8a1-201ENSMUST00000089332 Gm7735D3YX18 52 aa4.43□□□□□ -1.7
Col8a1-201ENSMUST00000089332 Mt2P02798 61 aa4.43□□□□□ -1.7
Col8a1-201ENSMUST00000089332 Kmt2cQ8BRH4 4903 aa4.42□□□□□ -1.7
Col8a1-201ENSMUST00000089332 Krtap1-3A2A588 173 aa4.42□□□□□ -1.7
Col8a1-201ENSMUST00000089332 2310046K23RikA0A0A6YVW6 87 aa4.38□□□□□ -1.71
Col8a1-201ENSMUST00000089332 Krtap19-2Q925I0 141 aa4.38□□□□□ -1.71
Col8a1-201ENSMUST00000089332 Lce1jD3YUU5 139 aa4.36□□□□□ -1.71
Col8a1-201ENSMUST00000089332 Lce3eF8VQJ0 98 aa4.36□□□□□ -1.71
Col8a1-201ENSMUST00000089332 Lce3fQ6PAI4 98 aa4.36□□□□□ -1.71
Col8a1-201ENSMUST00000089332 Lce3dE9Q8V1 98 aa4.34□□□□□ -1.71
Col8a1-201ENSMUST00000089332 Gm9789Q8BIG3 52 aa4.32□□□□□ -1.72
Col8a1-201ENSMUST00000089332 Gm38119A0A0A6YX29 146 aa4.31□□□□□ -1.72
Col8a1-201ENSMUST00000089332 Sprr2iO70560 76 aa4.31□□□□□ -1.72
Col8a1-201ENSMUST00000089332 Gm10142J3KMP7 120 aa4.3□□□□□ -1.72
Col8a1-201ENSMUST00000089332 Herc1E9PZP8 4859 aa4.27□□□□□ -1.73
Col8a1-201ENSMUST00000089332 Birc6O88738 4882 aa4.26□□□□□ -1.73
Col8a1-201ENSMUST00000089332 Pkhd1E9PZ36 4059 aa4.24□□□□□ -1.73
Col8a1-201ENSMUST00000089332 Lce3aQ497I5 98 aa4.24□□□□□ -1.73
Col8a1-201ENSMUST00000089332 Mdn1A2ANY6 5589 aaKnown RBP4.23□□□□□ -1.73
Col8a1-201ENSMUST00000089332 Abca13Q5SSE9 5034 aa4.2□□□□□ -1.74
Col8a1-201ENSMUST00000089332 Gm10061D3Z714 54 aa4.19□□□□□ -1.74
Col8a1-201ENSMUST00000089332 A0A1Y7VJH8 109 aa4.18□□□□□ -1.74
Col8a1-201ENSMUST00000089332 Lce1fB9EJP6 147 aa4.13□□□□□ -1.75
Col8a1-201ENSMUST00000089332 Lce1cQ9D1C5 147 aa4.13□□□□□ -1.75
Col8a1-201ENSMUST00000089332 Lce1lQ9D1G7 135 aa4.13□□□□□ -1.75
Col8a1-201ENSMUST00000089332 Lce1dQ9D731 133 aa4.13□□□□□ -1.75
Col8a1-201ENSMUST00000089332 Lce1gQ9D195 139 aa4.12□□□□□ -1.75
Col8a1-201ENSMUST00000089332 Lce1iQ9D6P5 149 aa4.12□□□□□ -1.75
Col8a1-201ENSMUST00000089332 Lce1hQ9D6R3 140 aa4.12□□□□□ -1.75
Col8a1-201ENSMUST00000089332 Lce1bQ9D149 137 aa4.1□□□□□ -1.75
Col8a1-201ENSMUST00000089332 Gm11569B1AQB1 180 aa4.1□□□□□ -1.75
Col8a1-201ENSMUST00000089332 Syne1Q6ZWR6 8799 aa4.07□□□□□ -1.76
Col8a1-201ENSMUST00000089332 Krtap28-10A0A1Y7VP58 119 aa4.06□□□□□ -1.76
Col8a1-201ENSMUST00000089332 Sprr2fO70557 76 aa4.05□□□□□ -1.76
Col8a1-201ENSMUST00000089332 Ubr4A2AN08 5180 aa4.05□□□□□ -1.76
Col8a1-201ENSMUST00000089332 Pkhd1l1Q80ZA4 4249 aa4.04□□□□□ -1.76
Col8a1-201ENSMUST00000089332 Sprr2eO70556 76 aa4.04□□□□□ -1.76
Col8a1-201ENSMUST00000089332 4932415D10RikA0A1W2P6U8 4986 aa4.03□□□□□ -1.76
Col8a1-201ENSMUST00000089332 Lce1eQ9D139 143 aa4.03□□□□□ -1.76
Col8a1-201ENSMUST00000089332 Gm10024A0A0A0MQA4 119 aa4.02□□□□□ -1.77
Col8a1-201ENSMUST00000089332 Krtap19-4Q925H7 84 aa3.98□□□□□ -1.77
Col8a1-201ENSMUST00000089332 Fat4Q2PZL6 4981 aa3.97□□□□□ -1.77
Col8a1-201ENSMUST00000089332 Krtap9-3Q3V2C1 136 aa3.97□□□□□ -1.77
Col8a1-201ENSMUST00000089332 A0A1Y7VLE6 161 aa3.95□□□□□ -1.78
Col8a1-201ENSMUST00000089332 Lce1a2Q9D1K4 149 aa3.94□□□□□ -1.78
Col8a1-201ENSMUST00000089332 Krtap4-2B1AQ85 167 aa3.92□□□□□ -1.78
Col8a1-201ENSMUST00000089332 Mt4P47945 62 aa3.91□□□□□ -1.78
Col8a1-201ENSMUST00000089332 ZanO88799 5376 aa3.91□□□□□ -1.78
Retrieved 100 of 22,080 RNA–protein pairs in 71.1 ms