RNA–Protein interactions for RNA: ENSMUST00000077672.11

Col4a3bp-201, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a3bp, Length 2,746 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-201ENSMUST00000077672 Gm21887J3QQ04 176 aa8.8□□□□□ -1
Col4a3bp-201ENSMUST00000077672 Ryr2E9Q401 4966 aaKnown RBP8.78□□□□□ -1
Col4a3bp-201ENSMUST00000077672 Gm17416Q30KP4 66 aa8.78□□□□□ -1
Col4a3bp-201ENSMUST00000077672 Dnah8Q91XQ0 4731 aa8.69□□□□□ -1.02
Col4a3bp-201ENSMUST00000077672 Gm19426M0QWC7 77 aa8.67□□□□□ -1.02
Col4a3bp-201ENSMUST00000077672 Abca13Q5SSE9 5034 aa8.66□□□□□ -1.02
Col4a3bp-201ENSMUST00000077672 2210017I01RikA0A0A6YVV1 95 aa8.63□□□□□ -1.03
Col4a3bp-201ENSMUST00000077672 Krtap7-1Q9D3I6 87 aa8.6□□□□□ -1.03
Col4a3bp-201ENSMUST00000077672 B930094E09RikQ8C4T2 136 aa8.59□□□□□ -1.03
Col4a3bp-201ENSMUST00000077672 Ryr1E9PZQ0 5035 aa8.59□□□□□ -1.03
Col4a3bp-201ENSMUST00000077672 Gm40193A0A1B0GT39 78 aa8.45□□□□□ -1.06
Col4a3bp-201ENSMUST00000077672 Gm9112A2AI92 75 aa8.42□□□□□ -1.06
Col4a3bp-201ENSMUST00000077672 Fam229aB2KGE5 128 aa8.39□□□□□ -1.07
Col4a3bp-201ENSMUST00000077672 BC029722A0A0N4SW31 51 aa8.38□□□□□ -1.07
Col4a3bp-201ENSMUST00000077672 Krtap13-1Q8K198 168 aa8.38□□□□□ -1.07
Col4a3bp-201ENSMUST00000077672 2310057N15RikQ9D6T8 200 aa8.34□□□□□ -1.07
Col4a3bp-201ENSMUST00000077672 Gm17402F6Z0L5 76 aa8.32□□□□□ -1.08
Col4a3bp-201ENSMUST00000077672 Dnhd1D3Z2X2 4750 aa8.27□□□□□ -1.08
Col4a3bp-201ENSMUST00000077672 Kiaa1109A2AAE1 5005 aa8.26□□□□□ -1.09
Col4a3bp-201ENSMUST00000077672 Gm19668J3QMD1 248 aa8.23□□□□□ -1.09
Col4a3bp-201ENSMUST00000077672 Herc2Q4U2R1 4836 aa8.21□□□□□ -1.09
Col4a3bp-201ENSMUST00000077672 Gm19402J3QJV4 266 aa8.18□□□□□ -1.1
Col4a3bp-201ENSMUST00000077672 Krtap1-5A2A590 122 aa8.16□□□□□ -1.1
Col4a3bp-201ENSMUST00000077672 HydinQ80W93 5154 aa8.16□□□□□ -1.1
Col4a3bp-201ENSMUST00000077672 Lrp2A2ARV4 4660 aa8.14□□□□□ -1.11
Col4a3bp-201ENSMUST00000077672 Birc6O88738 4882 aa8.11□□□□□ -1.11
Col4a3bp-201ENSMUST00000077672 Sec61bQ9CQS8 96 aaKnown RBP8.08□□□□□ -1.12
Col4a3bp-201ENSMUST00000077672 Sprr2a3Q4KL71 83 aa8.01□□□□□ -1.13
Col4a3bp-201ENSMUST00000077672 Sprr2a1Q9CQK8 83 aa8.01□□□□□ -1.13
Col4a3bp-201ENSMUST00000077672 Spink7Q6IE32 76 aa7.91□□□□□ -1.14
Col4a3bp-201ENSMUST00000077672 Krtap16-3Q8C1I6 86 aa7.91□□□□□ -1.14
Col4a3bp-201ENSMUST00000077672 Gm10318A0A1W2P728 225 aa7.9□□□□□ -1.15
Col4a3bp-201ENSMUST00000077672 Crct1Q6PAI5 102 aa7.86□□□□□ -1.15
Col4a3bp-201ENSMUST00000077672 Krtap19-1Q925H2 87 aa7.78□□□□□ -1.16
Col4a3bp-201ENSMUST00000077672 Krtap19-3Q925H6 87 aa7.71□□□□□ -1.18
Col4a3bp-201ENSMUST00000077672 Camk2n1Q6QWF9 78 aa7.69□□□□□ -1.18
Col4a3bp-201ENSMUST00000077672 PcloQ9QYX7 5068 aa7.68□□□□□ -1.18
Col4a3bp-201ENSMUST00000077672 Krtap1-4Q3V2D6 188 aa7.64□□□□□ -1.19
Col4a3bp-201ENSMUST00000077672 Herc1E9PZP8 4859 aa7.55□□□□□ -1.2
Col4a3bp-201ENSMUST00000077672 Tnp1P10856 55 aa7.47□□□□□ -1.21
Col4a3bp-201ENSMUST00000077672 ZanO88799 5376 aa7.41□□□□□ -1.22
Col4a3bp-201ENSMUST00000077672 4932415D10RikA0A1W2P6U8 4986 aa7.38□□□□□ -1.23
Col4a3bp-201ENSMUST00000077672 Lce1jD3YUU5 139 aa7.36□□□□□ -1.23
Col4a3bp-201ENSMUST00000077672 Ubr4A2AN08 5180 aa7.29□□□□□ -1.24
Col4a3bp-201ENSMUST00000077672 Fat4Q2PZL6 4981 aa7.28□□□□□ -1.24
Col4a3bp-201ENSMUST00000077672 Krtap1-3A2A588 173 aa7.25□□□□□ -1.25
Col4a3bp-201ENSMUST00000077672 Krtap12-1Q9Z287 130 aa7.24□□□□□ -1.25
Col4a3bp-201ENSMUST00000077672 Krtap19-9aF8WH65 55 aa7.22□□□□□ -1.25
Col4a3bp-201ENSMUST00000077672 Hmcn2A2AJ76 5100 aa7.2□□□□□ -1.26
Col4a3bp-201ENSMUST00000077672 Ush2AQ2QI47 5193 aa7.18□□□□□ -1.26
Col4a3bp-201ENSMUST00000077672 2310046K23RikA0A0A6YVW6 87 aa7.12□□□□□ -1.27
Col4a3bp-201ENSMUST00000077672 LorP18165 486 aa7.1□□□□□ -1.27
Col4a3bp-201ENSMUST00000077672 Lce1mQ9CR91 182 aa7.09□□□□□ -1.27
Col4a3bp-201ENSMUST00000077672 Krtap17-1A2A5X6 109 aa7.01□□□□□ -1.29
Col4a3bp-201ENSMUST00000077672 Krtap8-1O08633 61 aa7□□□□□ -1.29
Col4a3bp-201ENSMUST00000077672 Rnf213E9Q555 5152 aaKnown RBP6.99□□□□□ -1.29
Col4a3bp-201ENSMUST00000077672 Lce1iQ9D6P5 149 aa6.9□□□□□ -1.3
Col4a3bp-201ENSMUST00000077672 Krtap19-9bQ99NG9 58 aa6.88□□□□□ -1.31
Col4a3bp-201ENSMUST00000077672 Lce1a2Q9D1K4 149 aa6.86□□□□□ -1.31
Col4a3bp-201ENSMUST00000077672 Gm9789Q8BIG3 52 aa6.85□□□□□ -1.31
Col4a3bp-201ENSMUST00000077672 Krtap19-2Q925I0 141 aa6.78□□□□□ -1.32
Col4a3bp-201ENSMUST00000077672 Krtap9-3Q3V2C1 136 aa6.76□□□□□ -1.33
Col4a3bp-201ENSMUST00000077672 Krtap9-5A2A5X3 358 aa6.73□□□□□ -1.33
Col4a3bp-201ENSMUST00000077672 SspoQ8CG65 4998 aa6.72□□□□□ -1.33
Col4a3bp-201ENSMUST00000077672 Gm18596A0A1W2P860 280 aa6.72□□□□□ -1.33
Col4a3bp-201ENSMUST00000077672 Lce1hQ9D6R3 140 aa6.67□□□□□ -1.34
Col4a3bp-201ENSMUST00000077672 Prm1P02319 51 aa6.65□□□□□ -1.35
Col4a3bp-201ENSMUST00000077672 Gm7735D3YX18 52 aa6.63□□□□□ -1.35
Col4a3bp-201ENSMUST00000077672 Lce1dQ9D731 133 aa6.43□□□□□ -1.38
Col4a3bp-201ENSMUST00000077672 Mt2P02798 61 aa6.38□□□□□ -1.39
Col4a3bp-201ENSMUST00000077672 4933428G20RikQ9D3X4 101 aa6.37□□□□□ -1.39
Col4a3bp-201ENSMUST00000077672 Muc5bE9Q5I3 4800 aa6.36□□□□□ -1.39
Col4a3bp-201ENSMUST00000077672 Gm6358A0A087WPH4 74 aa6.34□□□□□ -1.39
Col4a3bp-201ENSMUST00000077672 Sprr2gO70558 76 aa6.33□□□□□ -1.4
Col4a3bp-201ENSMUST00000077672 Gm10061D3Z714 54 aa6.24□□□□□ -1.41
Col4a3bp-201ENSMUST00000077672 Gm11938Q9D3H4 131 aa6.22□□□□□ -1.41
Col4a3bp-201ENSMUST00000077672 Lce1eQ9D139 143 aa6.19□□□□□ -1.42
Col4a3bp-201ENSMUST00000077672 Sprr2dO70555 85 aa6.15□□□□□ -1.42
Col4a3bp-201ENSMUST00000077672 Gm10272F7CZ33 110 aa5.98□□□□□ -1.45
Col4a3bp-201ENSMUST00000077672 Krtap22-2J3QNX6 67 aa5.97□□□□□ -1.45
Col4a3bp-201ENSMUST00000077672 Krtap31-1Q9D644 177 aa5.85□□□□□ -1.47
Col4a3bp-201ENSMUST00000077672 Lce1cQ9D1C5 147 aa5.82□□□□□ -1.48
Col4a3bp-201ENSMUST00000077672 Gm11562A0PK51 136 aa5.79□□□□□ -1.48
Col4a3bp-201ENSMUST00000077672 Mdn1A2ANY6 5589 aaKnown RBP5.76□□□□□ -1.49
Col4a3bp-201ENSMUST00000077672 Sprr2iO70560 76 aa5.76□□□□□ -1.49
Col4a3bp-201ENSMUST00000077672 Gm11569B1AQB1 180 aa5.73□□□□□ -1.49
Col4a3bp-201ENSMUST00000077672 Gm10100J3QK64 120 aa5.68□□□□□ -1.5
Col4a3bp-201ENSMUST00000077672 Krtap19-4Q925H7 84 aa5.63□□□□□ -1.51
Col4a3bp-201ENSMUST00000077672 Lce1fB9EJP6 147 aa5.6□□□□□ -1.51
Col4a3bp-201ENSMUST00000077672 Lce1a1Q9CQH5 143 aa5.6□□□□□ -1.51
Col4a3bp-201ENSMUST00000077672 Gm10142J3KMP7 120 aa5.59□□□□□ -1.51
Col4a3bp-201ENSMUST00000077672 Lce3bQ9CQM7 98 aa5.58□□□□□ -1.52
Col4a3bp-201ENSMUST00000077672 Syne1Q6ZWR6 8799 aa5.49□□□□□ -1.53
Col4a3bp-201ENSMUST00000077672 Sprr2fO70557 76 aa5.45□□□□□ -1.54
Col4a3bp-201ENSMUST00000077672 Sprr2eO70556 76 aa5.44□□□□□ -1.54
Col4a3bp-201ENSMUST00000077672 Sprr2hO70559 108 aa5.41□□□□□ -1.54
Col4a3bp-201ENSMUST00000077672 Lce3cQ91V05 98 aa5.39□□□□□ -1.55
Col4a3bp-201ENSMUST00000077672 Lce3dE9Q8V1 98 aa5.37□□□□□ -1.55
Col4a3bp-201ENSMUST00000077672 Sprr2kO70562 68 aa5.35□□□□□ -1.55
Col4a3bp-201ENSMUST00000077672 Lce3eF8VQJ0 98 aa5.27□□□□□ -1.57
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms