RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 2310057N15RikQ9D6T8 200 aa5.12□□□□□ -1.59
Trim17-201ENSMUST00000047697 B930094E09RikQ8C4T2 136 aa5.11□□□□□ -1.59
Trim17-201ENSMUST00000047697 Ryr1E9PZQ0 5035 aa5.11□□□□□ -1.59
Trim17-201ENSMUST00000047697 Fat3Q8BNA6 4555 aa5.1□□□□□ -1.59
Trim17-201ENSMUST00000047697 Spink7Q6IE32 76 aa5.08□□□□□ -1.6
Trim17-201ENSMUST00000047697 2210017I01RikA0A0A6YVV1 95 aa5.08□□□□□ -1.6
Trim17-201ENSMUST00000047697 Pkhd1l1Q80ZA4 4249 aa5.05□□□□□ -1.6
Trim17-201ENSMUST00000047697 Mycbp2Q7TPH6 4711 aa5.02□□□□□ -1.61
Trim17-201ENSMUST00000047697 Fam229aB2KGE5 128 aa4.99□□□□□ -1.61
Trim17-201ENSMUST00000047697 Sec61bQ9CQS8 96 aaKnown RBP4.98□□□□□ -1.61
Trim17-201ENSMUST00000047697 Krtap13-1Q8K198 168 aa4.96□□□□□ -1.62
Trim17-201ENSMUST00000047697 Abca13Q5SSE9 5034 aa4.91□□□□□ -1.62
Trim17-201ENSMUST00000047697 Gm10318A0A1W2P728 225 aa4.9□□□□□ -1.62
Trim17-201ENSMUST00000047697 Ryr2E9Q401 4966 aaKnown RBP4.87□□□□□ -1.63
Trim17-201ENSMUST00000047697 Camk2n1Q6QWF9 78 aa4.87□□□□□ -1.63
Trim17-201ENSMUST00000047697 Krtap7-1Q9D3I6 87 aa4.86□□□□□ -1.63
Trim17-201ENSMUST00000047697 Kmt2cQ8BRH4 4903 aa4.86□□□□□ -1.63
Trim17-201ENSMUST00000047697 Gm19402J3QJV4 266 aa4.83□□□□□ -1.64
Trim17-201ENSMUST00000047697 HydinQ80W93 5154 aa4.83□□□□□ -1.64
Trim17-201ENSMUST00000047697 Gm40193A0A1B0GT39 78 aa4.82□□□□□ -1.64
Trim17-201ENSMUST00000047697 Dnah8Q91XQ0 4731 aa4.81□□□□□ -1.64
Trim17-201ENSMUST00000047697 Crct1Q6PAI5 102 aa4.81□□□□□ -1.64
Trim17-201ENSMUST00000047697 Gm17402F6Z0L5 76 aa4.81□□□□□ -1.64
Trim17-201ENSMUST00000047697 Kiaa1109A2AAE1 5005 aa4.8□□□□□ -1.64
Trim17-201ENSMUST00000047697 Gm19668J3QMD1 248 aa4.77□□□□□ -1.65
Trim17-201ENSMUST00000047697 Lrp2A2ARV4 4660 aa4.76□□□□□ -1.65
Trim17-201ENSMUST00000047697 Gm9112A2AI92 75 aa4.74□□□□□ -1.65
Trim17-201ENSMUST00000047697 Herc2Q4U2R1 4836 aa4.74□□□□□ -1.65
Trim17-201ENSMUST00000047697 Krtap1-5A2A590 122 aa4.69□□□□□ -1.66
Trim17-201ENSMUST00000047697 Sprr2a3Q4KL71 83 aa4.67□□□□□ -1.66
Trim17-201ENSMUST00000047697 Sprr2a1Q9CQK8 83 aa4.67□□□□□ -1.66
Trim17-201ENSMUST00000047697 Dnhd1D3Z2X2 4750 aa4.58□□□□□ -1.68
Trim17-201ENSMUST00000047697 PcloQ9QYX7 5068 aa4.54□□□□□ -1.68
Trim17-201ENSMUST00000047697 Tnp1P10856 55 aa4.53□□□□□ -1.68
Trim17-201ENSMUST00000047697 Krtap16-3Q8C1I6 86 aa4.52□□□□□ -1.69
Trim17-201ENSMUST00000047697 Birc6O88738 4882 aa4.51□□□□□ -1.69
Trim17-201ENSMUST00000047697 Gm18596A0A1W2P860 280 aa4.51□□□□□ -1.69
Trim17-201ENSMUST00000047697 Krtap1-4Q3V2D6 188 aa4.46□□□□□ -1.7
Trim17-201ENSMUST00000047697 Herc1E9PZP8 4859 aa4.44□□□□□ -1.7
Trim17-201ENSMUST00000047697 Krtap19-1Q925H2 87 aa4.41□□□□□ -1.7
Trim17-201ENSMUST00000047697 Krtap19-3Q925H6 87 aa4.41□□□□□ -1.7
Trim17-201ENSMUST00000047697 Ubr4A2AN08 5180 aa4.31□□□□□ -1.72
Trim17-201ENSMUST00000047697 Lce1mQ9CR91 182 aa4.3□□□□□ -1.72
Trim17-201ENSMUST00000047697 Fat4Q2PZL6 4981 aa4.28□□□□□ -1.72
Trim17-201ENSMUST00000047697 Krtap19-9aF8WH65 55 aa4.26□□□□□ -1.73
Trim17-201ENSMUST00000047697 LorP18165 486 aa4.26□□□□□ -1.73
Trim17-201ENSMUST00000047697 Lce1jD3YUU5 139 aa4.25□□□□□ -1.73
Trim17-201ENSMUST00000047697 Krtap12-1Q9Z287 130 aa4.25□□□□□ -1.73
Trim17-201ENSMUST00000047697 ZanO88799 5376 aa4.24□□□□□ -1.73
Trim17-201ENSMUST00000047697 4932415D10RikA0A1W2P6U8 4986 aa4.17□□□□□ -1.74
Trim17-201ENSMUST00000047697 Ush2AQ2QI47 5193 aa4.12□□□□□ -1.75
Trim17-201ENSMUST00000047697 Krtap1-3A2A588 173 aa4.1□□□□□ -1.75
Trim17-201ENSMUST00000047697 Krtap19-9bQ99NG9 58 aa4.08□□□□□ -1.76
Trim17-201ENSMUST00000047697 Mdn1A2ANY6 5589 aaKnown RBP4.07□□□□□ -1.76
Trim17-201ENSMUST00000047697 Rnf213E9Q555 5152 aaKnown RBP4.06□□□□□ -1.76
Trim17-201ENSMUST00000047697 Krtap8-1O08633 61 aa4.06□□□□□ -1.76
Trim17-201ENSMUST00000047697 Hmcn2A2AJ76 5100 aa4.06□□□□□ -1.76
Trim17-201ENSMUST00000047697 Krtap17-1A2A5X6 109 aa4.03□□□□□ -1.76
Trim17-201ENSMUST00000047697 2310046K23RikA0A0A6YVW6 87 aa4□□□□□ -1.77
Trim17-201ENSMUST00000047697 Gm9789Q8BIG3 52 aa3.99□□□□□ -1.77
Trim17-201ENSMUST00000047697 Prm1P02319 51 aa3.99□□□□□ -1.77
Trim17-201ENSMUST00000047697 Gm7735D3YX18 52 aa3.98□□□□□ -1.77
Trim17-201ENSMUST00000047697 Krtap9-5A2A5X3 358 aa3.97□□□□□ -1.77
Trim17-201ENSMUST00000047697 Lce1iQ9D6P5 149 aa3.94□□□□□ -1.78
Trim17-201ENSMUST00000047697 Lce1a2Q9D1K4 149 aa3.93□□□□□ -1.78
Trim17-201ENSMUST00000047697 Krtap9-3Q3V2C1 136 aa3.92□□□□□ -1.78
Trim17-201ENSMUST00000047697 Krtap19-2Q925I0 141 aa3.92□□□□□ -1.78
Trim17-201ENSMUST00000047697 Krtap31-1Q9D644 177 aa3.85□□□□□ -1.79
Trim17-201ENSMUST00000047697 Lce1hQ9D6R3 140 aa3.85□□□□□ -1.79
Trim17-201ENSMUST00000047697 4933428G20RikQ9D3X4 101 aa3.81□□□□□ -1.8
Trim17-201ENSMUST00000047697 Mt2P02798 61 aa3.76□□□□□ -1.81
Trim17-201ENSMUST00000047697 A0A1Y7VJH8 109 aa3.7□□□□□ -1.82
Trim17-201ENSMUST00000047697 Lce1dQ9D731 133 aa3.68□□□□□ -1.82
Trim17-201ENSMUST00000047697 Gm10061D3Z714 54 aa3.67□□□□□ -1.82
Trim17-201ENSMUST00000047697 Krtap31-2Q8CAY5 177 aa3.67□□□□□ -1.82
Trim17-201ENSMUST00000047697 Gm6358A0A087WPH4 74 aa3.66□□□□□ -1.82
Trim17-201ENSMUST00000047697 Gm10272F7CZ33 110 aa3.65□□□□□ -1.82
Trim17-201ENSMUST00000047697 Fsip2A2ARZ3 6995 aa3.65□□□□□ -1.82
Trim17-201ENSMUST00000047697 SspoQ8CG65 4998 aa3.65□□□□□ -1.82
Trim17-201ENSMUST00000047697 Krtap28-10A0A1Y7VP58 119 aa3.64□□□□□ -1.83
Trim17-201ENSMUST00000047697 Gm11569B1AQB1 180 aa3.59□□□□□ -1.83
Trim17-201ENSMUST00000047697 Sprr2gO70558 76 aa3.59□□□□□ -1.83
Trim17-201ENSMUST00000047697 Krtap22-2J3QNX6 67 aa3.54□□□□□ -1.84
Trim17-201ENSMUST00000047697 Lce1eQ9D139 143 aa3.53□□□□□ -1.84
Trim17-201ENSMUST00000047697 Gm11938Q9D3H4 131 aa3.52□□□□□ -1.85
Trim17-201ENSMUST00000047697 Krtap4-2B1AQ85 167 aa3.51□□□□□ -1.85
Trim17-201ENSMUST00000047697 Sprr2kO70562 68 aa3.51□□□□□ -1.85
Trim17-201ENSMUST00000047697 Muc5bE9Q5I3 4800 aa3.51□□□□□ -1.85
Trim17-201ENSMUST00000047697 Gm10100J3QK64 120 aa3.5□□□□□ -1.85
Trim17-201ENSMUST00000047697 A0A1Y7VLE6 161 aa3.47□□□□□ -1.85
Trim17-201ENSMUST00000047697 Krtap4-6Q3V4B7 195 aa3.46□□□□□ -1.86
Trim17-201ENSMUST00000047697 Krtap28-13A0A087WQP5 138 aa3.45□□□□□ -1.86
Trim17-201ENSMUST00000047697 Lce3bQ9CQM7 98 aa3.44□□□□□ -1.86
Trim17-201ENSMUST00000047697 Sprr2dO70555 85 aa3.44□□□□□ -1.86
Trim17-201ENSMUST00000047697 Syne1Q6ZWR6 8799 aa3.43□□□□□ -1.86
Trim17-201ENSMUST00000047697 A030005L19RikA0A1Y7VIU2 113 aa3.43□□□□□ -1.86
Trim17-201ENSMUST00000047697 Lce1cQ9D1C5 147 aa3.41□□□□□ -1.86
Trim17-201ENSMUST00000047697 Gm10142J3KMP7 120 aa3.4□□□□□ -1.87
Trim17-201ENSMUST00000047697 Krtap4-1Q3UUY3 169 aa3.4□□□□□ -1.87
Trim17-201ENSMUST00000047697 Gm38119A0A0A6YX29 146 aa3.39□□□□□ -1.87
Retrieved 100 of 22,080 RNA–protein pairs in 74.6 ms