RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 Rhox8Q6VSS7 320 aa18.28■□□□□ 0.52
Trim17-201ENSMUST00000047697 NischQ80TM9 1593 aa18.28■□□□□ 0.52
Trim17-201ENSMUST00000047697 Abcc9P70170 1546 aa17.57■□□□□ 0.4
Trim17-201ENSMUST00000047697 Rpgrip1Q9EPQ2 1331 aa17.3■□□□□ 0.36
Trim17-201ENSMUST00000047697 Gm35339A0A140LHH9 1649 aa17.19■□□□□ 0.34
Trim17-201ENSMUST00000047697 Ehmt2Q9Z148 1263 aaKnown RBP17.18■□□□□ 0.34
Trim17-201ENSMUST00000047697 Rtl1Q7M732 1744 aa17.16■□□□□ 0.34
Trim17-201ENSMUST00000047697 Ccdc180J3QNE4 1664 aa17.13■□□□□ 0.33
Trim17-201ENSMUST00000047697 Abcc8B2RUS7 1588 aa17.1■□□□□ 0.33
Trim17-201ENSMUST00000047697 Acin1Q9JIX8 1338 aaKnown RBP16.87■□□□□ 0.29
Trim17-201ENSMUST00000047697 Ccdc136Q3TVA9 1136 aa16.81■□□□□ 0.28
Trim17-201ENSMUST00000047697 HrcG5E8J6 738 aa16.52■□□□□ 0.23
Trim17-201ENSMUST00000047697 Pcgf6Q99NA9 353 aa16.49■□□□□ 0.23
Trim17-201ENSMUST00000047697 Trim41Q5NCC3 630 aa16.47■□□□□ 0.23
Trim17-201ENSMUST00000047697 Zcchc6Q5BLK4 1491 aaKnown RBP16.45■□□□□ 0.22
Trim17-201ENSMUST00000047697 Dcaf1Q80TR8 1506 aa16.25■□□□□ 0.19
Trim17-201ENSMUST00000047697 Supt5hO55201 1082 aaKnown RBP16.18■□□□□ 0.18
Trim17-201ENSMUST00000047697 Zeb1Q64318 1117 aa16.18■□□□□ 0.18
Trim17-201ENSMUST00000047697 Gab3Q8BSM5 595 aa16.16■□□□□ 0.18
Trim17-201ENSMUST00000047697 Cngb1E1AZ71 1325 aa16.1■□□□□ 0.17
Trim17-201ENSMUST00000047697 Rb1cc1Q9ESK9 1588 aa16.06■□□□□ 0.16
Trim17-201ENSMUST00000047697 Neurod1Q60867 357 aa15.84■□□□□ 0.13
Trim17-201ENSMUST00000047697 Cep164Q5DU05 1446 aa15.84■□□□□ 0.13
Trim17-201ENSMUST00000047697 NefmP08553 848 aa15.82■□□□□ 0.12
Trim17-201ENSMUST00000047697 Las1lA2BE28 776 aaKnown RBP15.8■□□□□ 0.12
Trim17-201ENSMUST00000047697 Baz1aO88379 1555 aa15.79■□□□□ 0.12
Trim17-201ENSMUST00000047697 Wdr66E9Q743 1299 aa15.79■□□□□ 0.12
Trim17-201ENSMUST00000047697 Chic1Q8CBW7 227 aa15.75■□□□□ 0.11
Trim17-201ENSMUST00000047697 Mier1Q5UAK0 511 aa15.74■□□□□ 0.11
Trim17-201ENSMUST00000047697 Esf1Q3V1V3 845 aaKnown RBP15.73■□□□□ 0.11
Trim17-201ENSMUST00000047697 ScribQ80U72 1612 aa15.67■□□□□ 0.1
Trim17-201ENSMUST00000047697 UbtfP25976 765 aaKnown RBP15.66■□□□□ 0.1
Trim17-201ENSMUST00000047697 Kdm5dQ62240 1548 aa15.64■□□□□ 0.09
Trim17-201ENSMUST00000047697 Sall2Q9QX96 1004 aa15.64■□□□□ 0.09
Trim17-201ENSMUST00000047697 Ppargc1bQ8VHJ7 1014 aa15.56■□□□□ 0.08
Trim17-201ENSMUST00000047697 Rsf1E9PWW9 1441 aaKnown RBP15.54■□□□□ 0.08
Trim17-201ENSMUST00000047697 Myt1lP97500 1187 aa15.53■□□□□ 0.08
Trim17-201ENSMUST00000047697 NacadQ5SWP3 1504 aa15.49■□□□□ 0.07
Trim17-201ENSMUST00000047697 Cdk11bP24788 784 aaKnown RBP15.42■□□□□ 0.06
Trim17-201ENSMUST00000047697 Csrnp3P59055 597 aa15.41■□□□□ 0.06
Trim17-201ENSMUST00000047697 Brd4Q9ESU6 1400 aaKnown RBP15.39■□□□□ 0.05
Trim17-201ENSMUST00000047697 Nop58Q6DFW4 536 aaKnown RBP15.39■□□□□ 0.05
Trim17-201ENSMUST00000047697 Ccdc88bQ4QRL3 1481 aa15.37■□□□□ 0.05
Trim17-201ENSMUST00000047697 Smarca2Q6DIC0 1577 aa15.37■□□□□ 0.05
Trim17-201ENSMUST00000047697 Npm2Q80W85 207 aa15.36■□□□□ 0.05
Trim17-201ENSMUST00000047697 Anks4bQ8K3X6 423 aa15.35■□□□□ 0.05
Trim17-201ENSMUST00000047697 Aebp2Q9Z248 504 aaKnown RBP15.33■□□□□ 0.04
Trim17-201ENSMUST00000047697 1700123L14RikQ3V2K7 440 aa15.31■□□□□ 0.04
Trim17-201ENSMUST00000047697 Golga3P55937 1487 aa15.29■□□□□ 0.04
Trim17-201ENSMUST00000047697 ClspnQ80YR7 1315 aa15.26■□□□□ 0.03
Trim17-201ENSMUST00000047697 CenpbP27790 599 aa15.25■□□□□ 0.03
Trim17-201ENSMUST00000047697 TonslQ6NZL6 1363 aa15.22■□□□□ 0.03
Trim17-201ENSMUST00000047697 Gm38655A0A286YDK6 273 aa15.21■□□□□ 0.03
Trim17-201ENSMUST00000047697 Crybg2B7ZCC2 1516 aa15.2■□□□□ 0.02
Trim17-201ENSMUST00000047697 Plekhg3Q4VAC9 1341 aa15.17■□□□□ 0.02
Trim17-201ENSMUST00000047697 Cecr2E9Q2Z1 1453 aa15.15■□□□□ 0.02
Trim17-201ENSMUST00000047697 Sycp2Q9CUU3 1500 aa15.07■□□□□ 0
Trim17-201ENSMUST00000047697 Aplp2Q06335 707 aa15.05■□□□□ -0
Trim17-201ENSMUST00000047697 Ap3b1Q9Z1T1 1105 aa15.05■□□□□ -0
Trim17-201ENSMUST00000047697 Eid3Q3V124 375 aa15.03■□□□□ -0
Trim17-201ENSMUST00000047697 Synj1Q8CHC4 1574 aa15.03■□□□□ -0
Trim17-201ENSMUST00000047697 Clip1Q922J3 1391 aa14.99□□□□□ -0.01
Trim17-201ENSMUST00000047697 Il27Q8K3I6 234 aa14.95□□□□□ -0.02
Trim17-201ENSMUST00000047697 Mapk8ip2Q9ERE9 830 aa14.94□□□□□ -0.02
Trim17-201ENSMUST00000047697 CftrP26361 1476 aa14.93□□□□□ -0.02
Trim17-201ENSMUST00000047697 Myt1Q8CFC2 1127 aa14.91□□□□□ -0.02
Trim17-201ENSMUST00000047697 Cep162Q6ZQ06 1403 aa14.87□□□□□ -0.03
Trim17-201ENSMUST00000047697 Fam50aQ9WV03 339 aaKnown RBP14.85□□□□□ -0.03
Trim17-201ENSMUST00000047697 Tnnt3Q9QZ47 272 aa14.83□□□□□ -0.04
Trim17-201ENSMUST00000047697 NclP09405 707 aaKnown RBP14.83□□□□□ -0.04
Trim17-201ENSMUST00000047697 Rapgef2Q8CHG7 1496 aa14.82□□□□□ -0.04
Trim17-201ENSMUST00000047697 Ube2uB1AUC4 352 aa14.8□□□□□ -0.04
Trim17-201ENSMUST00000047697 Slc24a1Q91WD8 1130 aa14.8□□□□□ -0.04
Trim17-201ENSMUST00000047697 SafbD3YXK2 937 aaKnown RBP14.77□□□□□ -0.05
Trim17-201ENSMUST00000047697 Hnrnpul2Q00PI9 745 aaKnown RBP14.76□□□□□ -0.05
Trim17-201ENSMUST00000047697 Cc2d2aQ8CFW7 1633 aa14.76□□□□□ -0.05
Trim17-201ENSMUST00000047697 Fmn1Q05860 1466 aa14.75□□□□□ -0.05
Trim17-201ENSMUST00000047697 Stra8P70278 393 aa14.73□□□□□ -0.05
Trim17-201ENSMUST00000047697 Lmod2Q3UHZ5 550 aa14.7□□□□□ -0.06
Trim17-201ENSMUST00000047697 Top2bQ64511 1612 aa14.7□□□□□ -0.06
Trim17-201ENSMUST00000047697 Fam71e1A1L3C1 212 aa14.7□□□□□ -0.06
Trim17-201ENSMUST00000047697 Cttnbp2B9EJA2 1648 aa14.69□□□□□ -0.06
Trim17-201ENSMUST00000047697 Setd5Q5XJV7 1441 aa14.64□□□□□ -0.07
Trim17-201ENSMUST00000047697 Top2aQ01320 1528 aaKnown RBP14.62□□□□□ -0.07
Trim17-201ENSMUST00000047697 Eea1Q8BL66 1411 aa14.61□□□□□ -0.07
Trim17-201ENSMUST00000047697 BicraF8VPZ9 1578 aa14.6□□□□□ -0.07
Trim17-201ENSMUST00000047697 BlmO88700 1416 aa14.58□□□□□ -0.08
Trim17-201ENSMUST00000047697 Anp32aO35381 247 aa14.57□□□□□ -0.08
Trim17-201ENSMUST00000047697 Smarca4Q3TKT4 1613 aaKnown RBP14.56□□□□□ -0.08
Trim17-201ENSMUST00000047697 Ncapd3Q6ZQK0 1506 aa14.56□□□□□ -0.08
Trim17-201ENSMUST00000047697 Eif5bQ05D44 1216 aaKnown RBP14.55□□□□□ -0.08
Trim17-201ENSMUST00000047697 Pelp1Q9DBD5 1123 aaKnown RBP14.53□□□□□ -0.08
Trim17-201ENSMUST00000047697 DiexfQ8BTT6 772 aaKnown RBP14.51□□□□□ -0.09
Trim17-201ENSMUST00000047697 Calr4Q3TQS0 420 aa14.48□□□□□ -0.09
Trim17-201ENSMUST00000047697 Hspa5P20029 655 aaKnown RBP14.45□□□□□ -0.1
Trim17-201ENSMUST00000047697 Baz1bQ9Z277 1479 aa14.43□□□□□ -0.1
Trim17-201ENSMUST00000047697 Arap1Q4LDD4 1452 aa14.42□□□□□ -0.1
Trim17-201ENSMUST00000047697 Kif15Q6P9L6 1387 aa14.42□□□□□ -0.1
Trim17-201ENSMUST00000047697 Ccdc18Q640L5 1455 aa14.41□□□□□ -0.1
Trim17-201ENSMUST00000047697 Arhgap35Q91YM2 1499 aa14.4□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 171.4 ms