RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Ryr3A2AGL3 4863 aa4.23□□□□□ -1.73
Cdc40-201ENSMUST00000044166 Pkhd1l1Q80ZA4 4249 aa4.21□□□□□ -1.74
Cdc40-201ENSMUST00000044166 Dync1h1Q9JHU4 4644 aaKnown RBP4.21□□□□□ -1.74
Cdc40-201ENSMUST00000044166 Ryr2E9Q401 4966 aaKnown RBP4.2□□□□□ -1.74
Cdc40-201ENSMUST00000044166 Fam229aB2KGE5 128 aa4.2□□□□□ -1.74
Cdc40-201ENSMUST00000044166 Krtap28-13A0A087WQP5 138 aa4.18□□□□□ -1.74
Cdc40-201ENSMUST00000044166 A030005L19RikA0A1Y7VIU2 113 aa4.18□□□□□ -1.74
Cdc40-201ENSMUST00000044166 Krtap7-1Q9D3I6 87 aa4.18□□□□□ -1.74
Cdc40-201ENSMUST00000044166 Gm7544A0A1Y7VJ58 118 aa4.17□□□□□ -1.74
Cdc40-201ENSMUST00000044166 Lrp1Q91ZX7 4545 aaKnown RBP4.17□□□□□ -1.74
Cdc40-201ENSMUST00000044166 Krtap3-1A2A591 98 aa4.13□□□□□ -1.75
Cdc40-201ENSMUST00000044166 Gm17416Q30KP4 66 aa4.12□□□□□ -1.75
Cdc40-201ENSMUST00000044166 Gm19426M0QWC7 77 aa4.11□□□□□ -1.75
Cdc40-201ENSMUST00000044166 A030005K14RikA0A1Y7VNY1 122 aa4.11□□□□□ -1.75
Cdc40-201ENSMUST00000044166 Camk2n1Q6QWF9 78 aa4.1□□□□□ -1.75
Cdc40-201ENSMUST00000044166 Fat3Q8BNA6 4555 aa4.09□□□□□ -1.75
Cdc40-201ENSMUST00000044166 Lce1mQ9CR91 182 aa4.08□□□□□ -1.76
Cdc40-201ENSMUST00000044166 Gm9736A0A1W2P7N1 277 aa4.05□□□□□ -1.76
Cdc40-201ENSMUST00000044166 2210017I01RikA0A0A6YVV1 95 aa4.05□□□□□ -1.76
Cdc40-201ENSMUST00000044166 Gm18596A0A1W2P860 280 aa4.04□□□□□ -1.76
Cdc40-201ENSMUST00000044166 Mycbp2Q7TPH6 4711 aa4.03□□□□□ -1.76
Cdc40-201ENSMUST00000044166 Krtap19-5O08632 62 aa4.03□□□□□ -1.76
Cdc40-201ENSMUST00000044166 Birc6O88738 4882 aa3.99□□□□□ -1.77
Cdc40-201ENSMUST00000044166 BC029722A0A0N4SW31 51 aa3.99□□□□□ -1.77
Cdc40-201ENSMUST00000044166 Krtap17-1A2A5X6 109 aa3.98□□□□□ -1.77
Cdc40-201ENSMUST00000044166 Abca13Q5SSE9 5034 aa3.98□□□□□ -1.77
Cdc40-201ENSMUST00000044166 Herc2Q4U2R1 4836 aa3.97□□□□□ -1.77
Cdc40-201ENSMUST00000044166 Kmt2cQ8BRH4 4903 aa3.96□□□□□ -1.78
Cdc40-201ENSMUST00000044166 Gm17402F6Z0L5 76 aa3.93□□□□□ -1.78
Cdc40-201ENSMUST00000044166 Gm40193A0A1B0GT39 78 aa3.92□□□□□ -1.78
Cdc40-201ENSMUST00000044166 PcloQ9QYX7 5068 aa3.92□□□□□ -1.78
Cdc40-201ENSMUST00000044166 Dnah8Q91XQ0 4731 aa3.9□□□□□ -1.78
Cdc40-201ENSMUST00000044166 Krtap13-1Q8K198 168 aa3.88□□□□□ -1.79
Cdc40-201ENSMUST00000044166 Kiaa1109A2AAE1 5005 aa3.88□□□□□ -1.79
Cdc40-201ENSMUST00000044166 HydinQ80W93 5154 aa3.87□□□□□ -1.79
Cdc40-201ENSMUST00000044166 Herc1E9PZP8 4859 aa3.83□□□□□ -1.8
Cdc40-201ENSMUST00000044166 Gm19402J3QJV4 266 aa3.82□□□□□ -1.8
Cdc40-201ENSMUST00000044166 Lrp2A2ARV4 4660 aa3.78□□□□□ -1.8
Cdc40-201ENSMUST00000044166 Krtap1-5A2A590 122 aa3.78□□□□□ -1.8
Cdc40-201ENSMUST00000044166 Sprr2a3Q4KL71 83 aa3.77□□□□□ -1.81
Cdc40-201ENSMUST00000044166 Sprr2a1Q9CQK8 83 aa3.77□□□□□ -1.81
Cdc40-201ENSMUST00000044166 Spink7Q6IE32 76 aa3.76□□□□□ -1.81
Cdc40-201ENSMUST00000044166 Krtap31-1Q9D644 177 aa3.75□□□□□ -1.81
Cdc40-201ENSMUST00000044166 Dnhd1D3Z2X2 4750 aa3.75□□□□□ -1.81
Cdc40-201ENSMUST00000044166 Gm7735D3YX18 52 aa3.72□□□□□ -1.81
Cdc40-201ENSMUST00000044166 Prm1P02319 51 aa3.72□□□□□ -1.81
Cdc40-201ENSMUST00000044166 Gm10318A0A1W2P728 225 aa3.71□□□□□ -1.82
Cdc40-201ENSMUST00000044166 4932415D10RikA0A1W2P6U8 4986 aa3.7□□□□□ -1.82
Cdc40-201ENSMUST00000044166 Ubr4A2AN08 5180 aa3.68□□□□□ -1.82
Cdc40-201ENSMUST00000044166 A0A286YCP9 139 aa3.66□□□□□ -1.82
Cdc40-201ENSMUST00000044166 A030003K21RikA0A1Y7VIM3 128 aa3.65□□□□□ -1.82
Cdc40-201ENSMUST00000044166 Gm6217A0A1Y7VJK9 128 aa3.63□□□□□ -1.83
Cdc40-201ENSMUST00000044166 Crct1Q6PAI5 102 aa3.62□□□□□ -1.83
Cdc40-201ENSMUST00000044166 Gm9789Q8BIG3 52 aa3.62□□□□□ -1.83
Cdc40-201ENSMUST00000044166 Ush2AQ2QI47 5193 aa3.6□□□□□ -1.83
Cdc40-201ENSMUST00000044166 A0A1Y7VJ07 166 aa3.59□□□□□ -1.83
Cdc40-201ENSMUST00000044166 Krtap4-1Q3UUY3 169 aa3.57□□□□□ -1.84
Cdc40-201ENSMUST00000044166 Krtap16-3Q8C1I6 86 aa3.57□□□□□ -1.84
Cdc40-201ENSMUST00000044166 Gm11562A0PK51 136 aa3.57□□□□□ -1.84
Cdc40-201ENSMUST00000044166 Tnp1P10856 55 aa3.52□□□□□ -1.85
Cdc40-201ENSMUST00000044166 Krtap1-4Q3V2D6 188 aa3.52□□□□□ -1.85
Cdc40-201ENSMUST00000044166 Krtap19-1Q925H2 87 aa3.51□□□□□ -1.85
Cdc40-201ENSMUST00000044166 Hmcn2A2AJ76 5100 aa3.5□□□□□ -1.85
Cdc40-201ENSMUST00000044166 Fat4Q2PZL6 4981 aa3.48□□□□□ -1.85
Cdc40-201ENSMUST00000044166 Krtap19-3Q925H6 87 aa3.47□□□□□ -1.85
Cdc40-201ENSMUST00000044166 Krtap31-2Q8CAY5 177 aa3.47□□□□□ -1.85
Cdc40-201ENSMUST00000044166 ZanO88799 5376 aa3.44□□□□□ -1.86
Cdc40-201ENSMUST00000044166 Krtap4-2B1AQ85 167 aa3.37□□□□□ -1.87
Cdc40-201ENSMUST00000044166 A030014E15RikA0A1Y7VJV2 120 aa3.35□□□□□ -1.87
Cdc40-201ENSMUST00000044166 Krtap19-9aF8WH65 55 aa3.34□□□□□ -1.87
Cdc40-201ENSMUST00000044166 Gm11563B1AQ90 168 aa3.33□□□□□ -1.88
Cdc40-201ENSMUST00000044166 Lce1jD3YUU5 139 aa3.33□□□□□ -1.88
Cdc40-201ENSMUST00000044166 Krtap4-7Q9D732 168 aa3.33□□□□□ -1.88
Cdc40-201ENSMUST00000044166 Rnf213E9Q555 5152 aaKnown RBP3.32□□□□□ -1.88
Cdc40-201ENSMUST00000044166 Krtap12-1Q9Z287 130 aa3.32□□□□□ -1.88
Cdc40-201ENSMUST00000044166 Gm11555B1AQ89 175 aa3.32□□□□□ -1.88
Cdc40-201ENSMUST00000044166 2310046K23RikA0A0A6YVW6 87 aa3.31□□□□□ -1.88
Cdc40-201ENSMUST00000044166 Krtap8-1O08633 61 aa3.28□□□□□ -1.88
Cdc40-201ENSMUST00000044166 Lce1gQ9D195 139 aa3.27□□□□□ -1.89
Cdc40-201ENSMUST00000044166 Krtap1-3A2A588 173 aa3.23□□□□□ -1.89
Cdc40-201ENSMUST00000044166 Krtap19-9bQ99NG9 58 aa3.23□□□□□ -1.89
Cdc40-201ENSMUST00000044166 Gm11569B1AQB1 180 aa3.22□□□□□ -1.89
Cdc40-201ENSMUST00000044166 LorP18165 486 aa3.22□□□□□ -1.89
Cdc40-201ENSMUST00000044166 Syne2Q6ZWQ0 6874 aaKnown RBP3.19□□□□□ -1.9
Cdc40-201ENSMUST00000044166 Gm10061D3Z714 54 aa3.19□□□□□ -1.9
Cdc40-201ENSMUST00000044166 Lce1iQ9D6P5 149 aa3.13□□□□□ -1.91
Cdc40-201ENSMUST00000044166 Gm11596B1AQB0 205 aa3.12□□□□□ -1.91
Cdc40-201ENSMUST00000044166 Krtap9-3Q3V2C1 136 aa3.11□□□□□ -1.91
Cdc40-201ENSMUST00000044166 Lce1a2Q9D1K4 149 aa3.11□□□□□ -1.91
Cdc40-201ENSMUST00000044166 4933428G20RikQ9D3X4 101 aa3.09□□□□□ -1.91
Cdc40-201ENSMUST00000044166 Lce1hQ9D6R3 140 aa3.08□□□□□ -1.92
Cdc40-201ENSMUST00000044166 Lce1dQ9D731 133 aa3.07□□□□□ -1.92
Cdc40-201ENSMUST00000044166 Krtap19-2Q925I0 141 aa3.06□□□□□ -1.92
Cdc40-201ENSMUST00000044166 Krtap9-5A2A5X3 358 aa3.03□□□□□ -1.92
Cdc40-201ENSMUST00000044166 Mdn1A2ANY6 5589 aaKnown RBP3.01□□□□□ -1.93
Cdc40-201ENSMUST00000044166 Krtap4-6Q3V4B7 195 aa3.01□□□□□ -1.93
Cdc40-201ENSMUST00000044166 Syne1Q6ZWR6 8799 aa3□□□□□ -1.93
Cdc40-201ENSMUST00000044166 Sprr2gO70558 76 aa2.95□□□□□ -1.94
Cdc40-201ENSMUST00000044166 SspoQ8CG65 4998 aa2.95□□□□□ -1.94
Cdc40-201ENSMUST00000044166 Muc5bE9Q5I3 4800 aa2.92□□□□□ -1.94
Retrieved 100 of 22,080 RNA–protein pairs in 63.8 ms