RNA–Protein interactions for RNA: ENSMUST00000035911.4

Rc3h1-201, Transcript of Roquin-1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Rc3h1, Length 3,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-201ENSMUST00000035911 Dnah7aE9Q0T8 4024 aa2.85□□□□□ -1.95
Rc3h1-201ENSMUST00000035911 Lrp1bQ9JI18 4599 aa2.84□□□□□ -1.96
Rc3h1-201ENSMUST00000035911 Ryr3A2AGL3 4863 aa2.84□□□□□ -1.96
Rc3h1-201ENSMUST00000035911 Dnah2P0C6F1 4456 aa2.82□□□□□ -1.96
Rc3h1-201ENSMUST00000035911 ApobE9Q414 4505 aa2.82□□□□□ -1.96
Rc3h1-201ENSMUST00000035911 Vps13dB1ART2 4390 aa2.82□□□□□ -1.96
Rc3h1-201ENSMUST00000035911 Gm2696A0A1W2P709 240 aa2.81□□□□□ -1.96
Rc3h1-201ENSMUST00000035911 Gm19668J3QMD1 248 aa2.81□□□□□ -1.96
Rc3h1-201ENSMUST00000035911 Vps13bQ80TY5 3993 aa2.81□□□□□ -1.96
Rc3h1-201ENSMUST00000035911 BC029722A0A0N4SW31 51 aa2.8□□□□□ -1.96
Rc3h1-201ENSMUST00000035911 Krtap28-10A0A1Y7VP58 119 aa2.8□□□□□ -1.96
Rc3h1-201ENSMUST00000035911 A0A1Y7VLE6 161 aa2.79□□□□□ -1.96
Rc3h1-201ENSMUST00000035911 SacsQ9JLC8 4582 aa2.76□□□□□ -1.97
Rc3h1-201ENSMUST00000035911 Lce1mQ9CR91 182 aa2.76□□□□□ -1.97
Rc3h1-201ENSMUST00000035911 Dync1h1Q9JHU4 4644 aaKnown RBP2.76□□□□□ -1.97
Rc3h1-201ENSMUST00000035911 Krtap28-13A0A087WQP5 138 aa2.76□□□□□ -1.97
Rc3h1-201ENSMUST00000035911 Gm17416Q30KP4 66 aa2.76□□□□□ -1.97
Rc3h1-201ENSMUST00000035911 Herc2Q4U2R1 4836 aa2.75□□□□□ -1.97
Rc3h1-201ENSMUST00000035911 A030005K14RikA0A1Y7VNY1 122 aa2.74□□□□□ -1.97
Rc3h1-201ENSMUST00000035911 Birc6O88738 4882 aa2.74□□□□□ -1.97
Rc3h1-201ENSMUST00000035911 Pkhd1l1Q80ZA4 4249 aa2.73□□□□□ -1.97
Rc3h1-201ENSMUST00000035911 Fat1A0A1L1SQU7 4645 aa2.71□□□□□ -1.98
Rc3h1-201ENSMUST00000035911 Krtap4-2B1AQ85 167 aa2.71□□□□□ -1.98
Rc3h1-201ENSMUST00000035911 Gm17402F6Z0L5 76 aa2.7□□□□□ -1.98
Rc3h1-201ENSMUST00000035911 Dnhd1D3Z2X2 4750 aa2.7□□□□□ -1.98
Rc3h1-201ENSMUST00000035911 Dnah8Q91XQ0 4731 aa2.7□□□□□ -1.98
Rc3h1-201ENSMUST00000035911 Pkhd1E9PZ36 4059 aa2.69□□□□□ -1.98
Rc3h1-201ENSMUST00000035911 Spink7Q6IE32 76 aa2.69□□□□□ -1.98
Rc3h1-201ENSMUST00000035911 Lrp1Q91ZX7 4545 aaKnown RBP2.68□□□□□ -1.98
Rc3h1-201ENSMUST00000035911 Krtap13-1Q8K198 168 aa2.67□□□□□ -1.98
Rc3h1-201ENSMUST00000035911 LorP18165 486 aa2.67□□□□□ -1.98
Rc3h1-201ENSMUST00000035911 Gm9736A0A1W2P7N1 277 aa2.66□□□□□ -1.98
Rc3h1-201ENSMUST00000035911 Gm19402J3QJV4 266 aa2.66□□□□□ -1.98
Rc3h1-201ENSMUST00000035911 Lce1jD3YUU5 139 aa2.65□□□□□ -1.98
Rc3h1-201ENSMUST00000035911 Abca13Q5SSE9 5034 aa2.65□□□□□ -1.98
Rc3h1-201ENSMUST00000035911 Fat2Q5F226 4351 aa2.65□□□□□ -1.99
Rc3h1-201ENSMUST00000035911 Krtap19-5O08632 62 aa2.64□□□□□ -1.99
Rc3h1-201ENSMUST00000035911 Gm18596A0A1W2P860 280 aa2.62□□□□□ -1.99
Rc3h1-201ENSMUST00000035911 Kmt2cQ8BRH4 4903 aa2.61□□□□□ -1.99
Rc3h1-201ENSMUST00000035911 Fat3Q8BNA6 4555 aa2.6□□□□□ -1.99
Rc3h1-201ENSMUST00000035911 HydinQ80W93 5154 aa2.59□□□□□ -1.99
Rc3h1-201ENSMUST00000035911 Krtap17-1A2A5X6 109 aa2.59□□□□□ -1.99
Rc3h1-201ENSMUST00000035911 Prm1P02319 51 aa2.59□□□□□ -2
Rc3h1-201ENSMUST00000035911 Mycbp2Q7TPH6 4711 aa2.58□□□□□ -2
Rc3h1-201ENSMUST00000035911 Tnp1P10856 55 aa2.57□□□□□ -2
Rc3h1-201ENSMUST00000035911 Sprr2a3Q4KL71 83 aa2.57□□□□□ -2
Rc3h1-201ENSMUST00000035911 Sprr2a1Q9CQK8 83 aa2.57□□□□□ -2
Rc3h1-201ENSMUST00000035911 Gm7735D3YX18 52 aa2.54□□□□□ -2
Rc3h1-201ENSMUST00000035911 A030005L19RikA0A1Y7VIU2 113 aa2.53□□□□□ -2
Rc3h1-201ENSMUST00000035911 Gm11562A0PK51 136 aa2.53□□□□□ -2
Rc3h1-201ENSMUST00000035911 Lce1bQ9D149 137 aa2.52□□□□□ -2.01
Rc3h1-201ENSMUST00000035911 Kiaa1109A2AAE1 5005 aa2.52□□□□□ -2.01
Rc3h1-201ENSMUST00000035911 Gm7544A0A1Y7VJ58 118 aa2.51□□□□□ -2.01
Rc3h1-201ENSMUST00000035911 Gm9789Q8BIG3 52 aa2.5□□□□□ -2.01
Rc3h1-201ENSMUST00000035911 Lce1hQ9D6R3 140 aa2.49□□□□□ -2.01
Rc3h1-201ENSMUST00000035911 PcloQ9QYX7 5068 aa2.49□□□□□ -2.01
Rc3h1-201ENSMUST00000035911 A0A1Y7VJ07 166 aa2.48□□□□□ -2.01
Rc3h1-201ENSMUST00000035911 Herc1E9PZP8 4859 aa2.48□□□□□ -2.01
Rc3h1-201ENSMUST00000035911 Krtap1-5A2A590 122 aa2.48□□□□□ -2.01
Rc3h1-201ENSMUST00000035911 4932415D10RikA0A1W2P6U8 4986 aa2.46□□□□□ -2.02
Rc3h1-201ENSMUST00000035911 Gm10318A0A1W2P728 225 aa2.42□□□□□ -2.02
Rc3h1-201ENSMUST00000035911 Hmcn2A2AJ76 5100 aa2.4□□□□□ -2.03
Rc3h1-201ENSMUST00000035911 Ush2AQ2QI47 5193 aa2.39□□□□□ -2.03
Rc3h1-201ENSMUST00000035911 Krtap1-3A2A588 173 aa2.38□□□□□ -2.03
Rc3h1-201ENSMUST00000035911 A030014E15RikA0A1Y7VJV2 120 aa2.38□□□□□ -2.03
Rc3h1-201ENSMUST00000035911 Lrp2A2ARV4 4660 aa2.38□□□□□ -2.03
Rc3h1-201ENSMUST00000035911 Lce1eQ9D139 143 aa2.36□□□□□ -2.03
Rc3h1-201ENSMUST00000035911 Crct1Q6PAI5 102 aa2.35□□□□□ -2.03
Rc3h1-201ENSMUST00000035911 2310046K23RikA0A0A6YVW6 87 aa2.32□□□□□ -2.04
Rc3h1-201ENSMUST00000035911 Krtap1-4Q3V2D6 188 aa2.32□□□□□ -2.04
Rc3h1-201ENSMUST00000035911 Ubr4A2AN08 5180 aa2.32□□□□□ -2.04
Rc3h1-201ENSMUST00000035911 Fat4Q2PZL6 4981 aa2.28□□□□□ -2.04
Rc3h1-201ENSMUST00000035911 Krtap16-3Q8C1I6 86 aa2.27□□□□□ -2.05
Rc3h1-201ENSMUST00000035911 Gm38119A0A0A6YX29 146 aa2.25□□□□□ -2.05
Rc3h1-201ENSMUST00000035911 Gm11559Q9D3H7 191 aa2.25□□□□□ -2.05
Rc3h1-201ENSMUST00000035911 A030003K21RikA0A1Y7VIM3 128 aa2.23□□□□□ -2.05
Rc3h1-201ENSMUST00000035911 Krtap19-1Q925H2 87 aa2.22□□□□□ -2.05
Rc3h1-201ENSMUST00000035911 4933428G20RikQ9D3X4 101 aa2.22□□□□□ -2.05
Rc3h1-201ENSMUST00000035911 ZanO88799 5376 aa2.21□□□□□ -2.06
Rc3h1-201ENSMUST00000035911 Krtap19-3Q925H6 87 aa2.21□□□□□ -2.06
Rc3h1-201ENSMUST00000035911 Krtap19-9aF8WH65 55 aa2.2□□□□□ -2.06
Rc3h1-201ENSMUST00000035911 Krtap8-1O08633 61 aa2.2□□□□□ -2.06
Rc3h1-201ENSMUST00000035911 Rnf213E9Q555 5152 aaKnown RBP2.2□□□□□ -2.06
Rc3h1-201ENSMUST00000035911 Muc5bE9Q5I3 4800 aa2.19□□□□□ -2.06
Rc3h1-201ENSMUST00000035911 Krtap19-9bQ99NG9 58 aa2.19□□□□□ -2.06
Rc3h1-201ENSMUST00000035911 Krtap12-1Q9Z287 130 aa2.18□□□□□ -2.06
Rc3h1-201ENSMUST00000035911 Lce1gQ9D195 139 aa2.16□□□□□ -2.06
Rc3h1-201ENSMUST00000035911 Gm10061D3Z714 54 aa2.14□□□□□ -2.07
Rc3h1-201ENSMUST00000035911 Gm6217A0A1Y7VJK9 128 aa2.14□□□□□ -2.07
Rc3h1-201ENSMUST00000035911 Gm11569B1AQB1 180 aa2.12□□□□□ -2.07
Rc3h1-201ENSMUST00000035911 Krtap9-3Q3V2C1 136 aa2.11□□□□□ -2.07
Rc3h1-201ENSMUST00000035911 Lce1dQ9D731 133 aa2.1□□□□□ -2.07
Rc3h1-201ENSMUST00000035911 SspoQ8CG65 4998 aa2.1□□□□□ -2.07
Rc3h1-201ENSMUST00000035911 Syne2Q6ZWQ0 6874 aaKnown RBP2.09□□□□□ -2.08
Rc3h1-201ENSMUST00000035911 Sprr2gO70558 76 aa2.06□□□□□ -2.08
Rc3h1-201ENSMUST00000035911 Gm11596B1AQB0 205 aa2.05□□□□□ -2.08
Rc3h1-201ENSMUST00000035911 Gm11938Q9D3H4 131 aa2.03□□□□□ -2.08
Rc3h1-201ENSMUST00000035911 Lce1iQ9D6P5 149 aa2.02□□□□□ -2.09
Rc3h1-201ENSMUST00000035911 Lce1a2Q9D1K4 149 aa2.01□□□□□ -2.09
Rc3h1-201ENSMUST00000035911 Lce1a1Q9CQH5 143 aa2□□□□□ -2.09
Retrieved 100 of 22,080 RNA–protein pairs in 81.9 ms