RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Fat2Q5F226 4351 aa5.35□□□□□ -1.55
Rnf40-201ENSMUST00000033088 Rps29P62274 56 aa5.35□□□□□ -1.55
Rnf40-201ENSMUST00000033088 SacsQ9JLC8 4582 aa5.32□□□□□ -1.56
Rnf40-201ENSMUST00000033088 Ryr1E9PZQ0 5035 aa5.3□□□□□ -1.56
Rnf40-201ENSMUST00000033088 Lrp1Q91ZX7 4545 aaKnown RBP5.3□□□□□ -1.56
Rnf40-201ENSMUST00000033088 Krtap19-5O08632 62 aa5.29□□□□□ -1.56
Rnf40-201ENSMUST00000033088 Crct1Q6PAI5 102 aa5.27□□□□□ -1.57
Rnf40-201ENSMUST00000033088 Vps13bQ80TY5 3993 aa5.26□□□□□ -1.57
Rnf40-201ENSMUST00000033088 Pkhd1l1Q80ZA4 4249 aa5.26□□□□□ -1.57
Rnf40-201ENSMUST00000033088 Kmt2cQ8BRH4 4903 aa5.25□□□□□ -1.57
Rnf40-201ENSMUST00000033088 Sec61bQ9CQS8 96 aaKnown RBP5.24□□□□□ -1.57
Rnf40-201ENSMUST00000033088 Dnah8Q91XQ0 4731 aa5.22□□□□□ -1.57
Rnf40-201ENSMUST00000033088 Fat3Q8BNA6 4555 aa5.21□□□□□ -1.58
Rnf40-201ENSMUST00000033088 Gm19668J3QMD1 248 aa5.16□□□□□ -1.58
Rnf40-201ENSMUST00000033088 Abca13Q5SSE9 5034 aa5.13□□□□□ -1.59
Rnf40-201ENSMUST00000033088 HydinQ80W93 5154 aa5.1□□□□□ -1.59
Rnf40-201ENSMUST00000033088 Herc2Q4U2R1 4836 aa5.08□□□□□ -1.6
Rnf40-201ENSMUST00000033088 Mycbp2Q7TPH6 4711 aa5.08□□□□□ -1.6
Rnf40-201ENSMUST00000033088 Krtap3-1A2A591 98 aa5.08□□□□□ -1.6
Rnf40-201ENSMUST00000033088 2210017I01RikA0A0A6YVV1 95 aa5.06□□□□□ -1.6
Rnf40-201ENSMUST00000033088 Krtap13-1Q8K198 168 aa5.05□□□□□ -1.6
Rnf40-201ENSMUST00000033088 Gm40193A0A1B0GT39 78 aa5.04□□□□□ -1.6
Rnf40-201ENSMUST00000033088 Kiaa1109A2AAE1 5005 aa5.04□□□□□ -1.6
Rnf40-201ENSMUST00000033088 Dnhd1D3Z2X2 4750 aa5.04□□□□□ -1.6
Rnf40-201ENSMUST00000033088 Birc6O88738 4882 aa5.02□□□□□ -1.61
Rnf40-201ENSMUST00000033088 Gm17416Q30KP4 66 aa5.02□□□□□ -1.61
Rnf40-201ENSMUST00000033088 Tnp1P10856 55 aa5.01□□□□□ -1.61
Rnf40-201ENSMUST00000033088 Gm19402J3QJV4 266 aa4.97□□□□□ -1.61
Rnf40-201ENSMUST00000033088 Krtap7-1Q9D3I6 87 aa4.96□□□□□ -1.62
Rnf40-201ENSMUST00000033088 Lrp2A2ARV4 4660 aa4.96□□□□□ -1.62
Rnf40-201ENSMUST00000033088 PcloQ9QYX7 5068 aa4.81□□□□□ -1.64
Rnf40-201ENSMUST00000033088 Lce1mQ9CR91 182 aa4.72□□□□□ -1.65
Rnf40-201ENSMUST00000033088 Gm17402F6Z0L5 76 aa4.71□□□□□ -1.66
Rnf40-201ENSMUST00000033088 Herc1E9PZP8 4859 aa4.66□□□□□ -1.66
Rnf40-201ENSMUST00000033088 Sprr2a3Q4KL71 83 aa4.58□□□□□ -1.68
Rnf40-201ENSMUST00000033088 Sprr2a1Q9CQK8 83 aa4.58□□□□□ -1.68
Rnf40-201ENSMUST00000033088 Gm18596A0A1W2P860 280 aa4.52□□□□□ -1.69
Rnf40-201ENSMUST00000033088 Syne1Q6ZWR6 8799 aa4.52□□□□□ -1.69
Rnf40-201ENSMUST00000033088 Krtap1-5A2A590 122 aa4.52□□□□□ -1.69
Rnf40-201ENSMUST00000033088 Krtap16-3Q8C1I6 86 aa4.52□□□□□ -1.69
Rnf40-201ENSMUST00000033088 Ubr4A2AN08 5180 aa4.52□□□□□ -1.69
Rnf40-201ENSMUST00000033088 Ush2AQ2QI47 5193 aa4.48□□□□□ -1.69
Rnf40-201ENSMUST00000033088 Krtap19-1Q925H2 87 aa4.48□□□□□ -1.69
Rnf40-201ENSMUST00000033088 LorP18165 486 aa4.47□□□□□ -1.69
Rnf40-201ENSMUST00000033088 Krtap19-3Q925H6 87 aa4.46□□□□□ -1.7
Rnf40-201ENSMUST00000033088 Hmcn2A2AJ76 5100 aa4.44□□□□□ -1.7
Rnf40-201ENSMUST00000033088 Prm1P02319 51 aa4.44□□□□□ -1.7
Rnf40-201ENSMUST00000033088 Gm9789Q8BIG3 52 aa4.44□□□□□ -1.7
Rnf40-201ENSMUST00000033088 Fat4Q2PZL6 4981 aa4.42□□□□□ -1.7
Rnf40-201ENSMUST00000033088 Krtap1-4Q3V2D6 188 aa4.41□□□□□ -1.7
Rnf40-201ENSMUST00000033088 Muc16A0A140LJ72 8478 aa4.41□□□□□ -1.7
Rnf40-201ENSMUST00000033088 Gm7735D3YX18 52 aa4.39□□□□□ -1.71
Rnf40-201ENSMUST00000033088 Krtap1-3A2A588 173 aa4.39□□□□□ -1.71
Rnf40-201ENSMUST00000033088 Gm6358A0A087WPH4 74 aa4.36□□□□□ -1.71
Rnf40-201ENSMUST00000033088 4932415D10RikA0A1W2P6U8 4986 aa4.36□□□□□ -1.71
Rnf40-201ENSMUST00000033088 ZanO88799 5376 aa4.34□□□□□ -1.71
Rnf40-201ENSMUST00000033088 Krtap4-1Q3UUY3 169 aa4.32□□□□□ -1.72
Rnf40-201ENSMUST00000033088 Krtap19-9aF8WH65 55 aa4.26□□□□□ -1.73
Rnf40-201ENSMUST00000033088 Mdn1A2ANY6 5589 aaKnown RBP4.25□□□□□ -1.73
Rnf40-201ENSMUST00000033088 Krtap12-1Q9Z287 130 aa4.24□□□□□ -1.73
Rnf40-201ENSMUST00000033088 4933428G20RikQ9D3X4 101 aa4.23□□□□□ -1.73
Rnf40-201ENSMUST00000033088 Rnf213E9Q555 5152 aaKnown RBP4.23□□□□□ -1.73
Rnf40-201ENSMUST00000033088 Lce1jD3YUU5 139 aa4.2□□□□□ -1.74
Rnf40-201ENSMUST00000033088 Krtap19-9bQ99NG9 58 aa4.14□□□□□ -1.75
Rnf40-201ENSMUST00000033088 Krtap17-1A2A5X6 109 aa4.12□□□□□ -1.75
Rnf40-201ENSMUST00000033088 SspoQ8CG65 4998 aa4.04□□□□□ -1.76
Rnf40-201ENSMUST00000033088 Krtap9-5A2A5X3 358 aa4.03□□□□□ -1.76
Rnf40-201ENSMUST00000033088 Gm11563B1AQ90 168 aa4.02□□□□□ -1.77
Rnf40-201ENSMUST00000033088 Krtap4-7Q9D732 168 aa4.02□□□□□ -1.77
Rnf40-201ENSMUST00000033088 Gm10061D3Z714 54 aa3.98□□□□□ -1.77
Rnf40-201ENSMUST00000033088 Gm11555B1AQ89 175 aa3.98□□□□□ -1.77
Rnf40-201ENSMUST00000033088 Krtap19-2Q925I0 141 aa3.98□□□□□ -1.77
Rnf40-201ENSMUST00000033088 Gm10272F7CZ33 110 aa3.93□□□□□ -1.78
Rnf40-201ENSMUST00000033088 Krtap9-3Q3V2C1 136 aa3.93□□□□□ -1.78
Rnf40-201ENSMUST00000033088 Krtap8-1O08633 61 aa3.92□□□□□ -1.78
Rnf40-201ENSMUST00000033088 Gm10100J3QK64 120 aa3.89□□□□□ -1.79
Rnf40-201ENSMUST00000033088 2310046K23RikA0A0A6YVW6 87 aa3.87□□□□□ -1.79
Rnf40-201ENSMUST00000033088 Lce1iQ9D6P5 149 aa3.86□□□□□ -1.79
Rnf40-201ENSMUST00000033088 Lce1a2Q9D1K4 149 aa3.84□□□□□ -1.79
Rnf40-201ENSMUST00000033088 Mt2P02798 61 aa3.81□□□□□ -1.8
Rnf40-201ENSMUST00000033088 Lce1hQ9D6R3 140 aa3.8□□□□□ -1.8
Rnf40-201ENSMUST00000033088 Muc5bE9Q5I3 4800 aa3.77□□□□□ -1.81
Rnf40-201ENSMUST00000033088 Gm11569B1AQB1 180 aa3.77□□□□□ -1.81
Rnf40-201ENSMUST00000033088 Lce3bQ9CQM7 98 aa3.77□□□□□ -1.81
Rnf40-201ENSMUST00000033088 Gm10142J3KMP7 120 aa3.72□□□□□ -1.81
Rnf40-201ENSMUST00000033088 Lce3cQ91V05 98 aa3.69□□□□□ -1.82
Rnf40-201ENSMUST00000033088 Lce1dQ9D731 133 aa3.69□□□□□ -1.82
Rnf40-201ENSMUST00000033088 Krtap4-2B1AQ85 167 aa3.64□□□□□ -1.83
Rnf40-201ENSMUST00000033088 Lce3dE9Q8V1 98 aa3.62□□□□□ -1.83
Rnf40-201ENSMUST00000033088 ObscnA2AAJ9 8891 aaKnown RBP3.61□□□□□ -1.83
Rnf40-201ENSMUST00000033088 Krtap22-2J3QNX6 67 aa3.61□□□□□ -1.83
Rnf40-201ENSMUST00000033088 Lce3eF8VQJ0 98 aa3.58□□□□□ -1.84
Rnf40-201ENSMUST00000033088 Lce3fQ6PAI4 98 aa3.58□□□□□ -1.84
Rnf40-201ENSMUST00000033088 Fsip2A2ARZ3 6995 aa3.57□□□□□ -1.84
Rnf40-201ENSMUST00000033088 Sprr2kO70562 68 aa3.55□□□□□ -1.84
Rnf40-201ENSMUST00000033088 Gm38119A0A0A6YX29 146 aa3.52□□□□□ -1.85
Rnf40-201ENSMUST00000033088 Sprr2gO70558 76 aa3.5□□□□□ -1.85
Rnf40-201ENSMUST00000033088 Lce1eQ9D139 143 aa3.48□□□□□ -1.85
Rnf40-201ENSMUST00000033088 Lce1gQ9D195 139 aa3.48□□□□□ -1.85
Rnf40-201ENSMUST00000033088 Lce1cQ9D1C5 147 aa3.47□□□□□ -1.85
Retrieved 100 of 22,080 RNA–protein pairs in 135.2 ms