RNA–Protein interactions for RNA: ENSMUST00000032168.6

Sec61a1-201, Transcript of Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sec61a1, Length 3,172 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1-201ENSMUST00000032168 Gm3880A0A1B0GSB3 72 aa8.5□□□□□ -1.05
Sec61a1-201ENSMUST00000032168 Gm17416Q30KP4 66 aa8.5□□□□□ -1.05
Sec61a1-201ENSMUST00000032168 2310057N15RikQ9D6T8 200 aa8.48□□□□□ -1.05
Sec61a1-201ENSMUST00000032168 Krtap3-1A2A591 98 aa8.45□□□□□ -1.06
Sec61a1-201ENSMUST00000032168 Gm9955Q8CEJ8 102 aa8.37□□□□□ -1.07
Sec61a1-201ENSMUST00000032168 2210017I01RikA0A0A6YVV1 95 aa8.35□□□□□ -1.07
Sec61a1-201ENSMUST00000032168 Pla2g10Q9QXX3 151 aa8.33□□□□□ -1.08
Sec61a1-201ENSMUST00000032168 Krtap13-1Q8K198 168 aa8.29□□□□□ -1.08
Sec61a1-201ENSMUST00000032168 Herc1E9PZP8 4859 aa8.28□□□□□ -1.08
Sec61a1-201ENSMUST00000032168 Gm10318A0A1W2P728 225 aa8.28□□□□□ -1.08
Sec61a1-201ENSMUST00000032168 Crct1Q6PAI5 102 aa8.24□□□□□ -1.09
Sec61a1-201ENSMUST00000032168 Sec61bQ9CQS8 96 aaKnown RBP8.18□□□□□ -1.1
Sec61a1-201ENSMUST00000032168 CriptO70333 101 aa8.18□□□□□ -1.1
Sec61a1-201ENSMUST00000032168 Krtap16-3Q8C1I6 86 aa8.06□□□□□ -1.12
Sec61a1-201ENSMUST00000032168 BC029722A0A0N4SW31 51 aa8.06□□□□□ -1.12
Sec61a1-201ENSMUST00000032168 Krtap1-5A2A590 122 aa8.01□□□□□ -1.13
Sec61a1-201ENSMUST00000032168 Gm12216A0A1W2P827 62 aa8□□□□□ -1.13
Sec61a1-201ENSMUST00000032168 Romo1P60603 79 aa7.95□□□□□ -1.14
Sec61a1-201ENSMUST00000032168 Ubr4A2AN08 5180 aa7.94□□□□□ -1.14
Sec61a1-201ENSMUST00000032168 Krtap19-1Q925H2 87 aa7.94□□□□□ -1.14
Sec61a1-201ENSMUST00000032168 Gm21887J3QQ04 176 aa7.93□□□□□ -1.14
Sec61a1-201ENSMUST00000032168 B930094E09RikQ8C4T2 136 aa7.92□□□□□ -1.14
Sec61a1-201ENSMUST00000032168 Lce1mQ9CR91 182 aa7.92□□□□□ -1.14
Sec61a1-201ENSMUST00000032168 Fam229aB2KGE5 128 aa7.92□□□□□ -1.14
Sec61a1-201ENSMUST00000032168 Krtap19-3Q925H6 87 aa7.91□□□□□ -1.14
Sec61a1-201ENSMUST00000032168 Ush2AQ2QI47 5193 aa7.9□□□□□ -1.14
Sec61a1-201ENSMUST00000032168 ZanO88799 5376 aa7.88□□□□□ -1.15
Sec61a1-201ENSMUST00000032168 Gm19426M0QWC7 77 aa7.85□□□□□ -1.15
Sec61a1-201ENSMUST00000032168 Gm19402J3QJV4 266 aa7.85□□□□□ -1.15
Sec61a1-201ENSMUST00000032168 Hmcn2A2AJ76 5100 aa7.82□□□□□ -1.16
Sec61a1-201ENSMUST00000032168 4932415D10RikA0A1W2P6U8 4986 aa7.78□□□□□ -1.16
Sec61a1-201ENSMUST00000032168 Spink7Q6IE32 76 aa7.78□□□□□ -1.16
Sec61a1-201ENSMUST00000032168 Fat4Q2PZL6 4981 aa7.76□□□□□ -1.17
Sec61a1-201ENSMUST00000032168 Krtap1-3A2A588 173 aa7.68□□□□□ -1.18
Sec61a1-201ENSMUST00000032168 Gm17402F6Z0L5 76 aa7.63□□□□□ -1.19
Sec61a1-201ENSMUST00000032168 Gm18596A0A1W2P860 280 aa7.63□□□□□ -1.19
Sec61a1-201ENSMUST00000032168 Sprr2a3Q4KL71 83 aa7.62□□□□□ -1.19
Sec61a1-201ENSMUST00000032168 Sprr2a1Q9CQK8 83 aa7.62□□□□□ -1.19
Sec61a1-201ENSMUST00000032168 LorP18165 486 aa7.59□□□□□ -1.19
Sec61a1-201ENSMUST00000032168 Krtap1-4Q3V2D6 188 aa7.59□□□□□ -1.19
Sec61a1-201ENSMUST00000032168 Rnf213E9Q555 5152 aaKnown RBP7.49□□□□□ -1.21
Sec61a1-201ENSMUST00000032168 Lce1jD3YUU5 139 aa7.47□□□□□ -1.21
Sec61a1-201ENSMUST00000032168 Gm9789Q8BIG3 52 aa7.47□□□□□ -1.21
Sec61a1-201ENSMUST00000032168 Krtap7-1Q9D3I6 87 aa7.35□□□□□ -1.23
Sec61a1-201ENSMUST00000032168 Gm7735D3YX18 52 aa7.34□□□□□ -1.23
Sec61a1-201ENSMUST00000032168 Krtap17-1A2A5X6 109 aa7.32□□□□□ -1.24
Sec61a1-201ENSMUST00000032168 Prm1P02319 51 aa7.31□□□□□ -1.24
Sec61a1-201ENSMUST00000032168 Krtap12-1Q9Z287 130 aa7.3□□□□□ -1.24
Sec61a1-201ENSMUST00000032168 Camk2n1Q6QWF9 78 aa7.27□□□□□ -1.25
Sec61a1-201ENSMUST00000032168 Mp68P56379 58 aa7.24□□□□□ -1.25
Sec61a1-201ENSMUST00000032168 Krtap19-9aF8WH65 55 aa7.21□□□□□ -1.26
Sec61a1-201ENSMUST00000032168 Gm19668J3QMD1 248 aa7.21□□□□□ -1.26
Sec61a1-201ENSMUST00000032168 Prm2P07978 107 aa7.13□□□□□ -1.27
Sec61a1-201ENSMUST00000032168 SspoQ8CG65 4998 aa7.03□□□□□ -1.28
Sec61a1-201ENSMUST00000032168 Gm20538F6Z9R1 75 aa7.02□□□□□ -1.29
Sec61a1-201ENSMUST00000032168 Gm40193A0A1B0GT39 78 aa7□□□□□ -1.29
Sec61a1-201ENSMUST00000032168 Krtap9-5A2A5X3 358 aa7□□□□□ -1.29
Sec61a1-201ENSMUST00000032168 Krtap19-2Q925I0 141 aa7□□□□□ -1.29
Sec61a1-201ENSMUST00000032168 Lce1iQ9D6P5 149 aa6.98□□□□□ -1.29
Sec61a1-201ENSMUST00000032168 Lce1a2Q9D1K4 149 aa6.93□□□□□ -1.3
Sec61a1-201ENSMUST00000032168 Ndufaf8A2AMZ4 74 aa6.83□□□□□ -1.32
Sec61a1-201ENSMUST00000032168 Gm10061D3Z714 54 aa6.79□□□□□ -1.32
Sec61a1-201ENSMUST00000032168 Krtap8-1O08633 61 aa6.73□□□□□ -1.33
Sec61a1-201ENSMUST00000032168 Tnp1P10856 55 aa6.67□□□□□ -1.34
Sec61a1-201ENSMUST00000032168 Krtap19-9bQ99NG9 58 aa6.66□□□□□ -1.34
Sec61a1-201ENSMUST00000032168 Muc5bE9Q5I3 4800 aa6.62□□□□□ -1.35
Sec61a1-201ENSMUST00000032168 Krtap9-3Q3V2C1 136 aa6.61□□□□□ -1.35
Sec61a1-201ENSMUST00000032168 Gm6358A0A087WPH4 74 aa6.59□□□□□ -1.35
Sec61a1-201ENSMUST00000032168 Mt2P02798 61 aa6.53□□□□□ -1.36
Sec61a1-201ENSMUST00000032168 Lce1hQ9D6R3 140 aa6.49□□□□□ -1.37
Sec61a1-201ENSMUST00000032168 Mdn1A2ANY6 5589 aaKnown RBP6.4□□□□□ -1.38
Sec61a1-201ENSMUST00000032168 Gm11569B1AQB1 180 aa6.4□□□□□ -1.38
Sec61a1-201ENSMUST00000032168 2310046K23RikA0A0A6YVW6 87 aa6.29□□□□□ -1.4
Sec61a1-201ENSMUST00000032168 Krtap22-2J3QNX6 67 aa6.11□□□□□ -1.43
Sec61a1-201ENSMUST00000032168 Gm9112A2AI92 75 aa5.98□□□□□ -1.45
Sec61a1-201ENSMUST00000032168 Gm10272F7CZ33 110 aa5.96□□□□□ -1.46
Sec61a1-201ENSMUST00000032168 Lce1dQ9D731 133 aa5.95□□□□□ -1.46
Sec61a1-201ENSMUST00000032168 Krtap4-6Q3V4B7 195 aa5.89□□□□□ -1.47
Sec61a1-201ENSMUST00000032168 Lce1eQ9D139 143 aa5.76□□□□□ -1.49
Sec61a1-201ENSMUST00000032168 Krtap4-1Q3UUY3 169 aa5.74□□□□□ -1.49
Sec61a1-201ENSMUST00000032168 Fsip2A2ARZ3 6995 aa5.73□□□□□ -1.49
Sec61a1-201ENSMUST00000032168 Gm11555B1AQ89 175 aa5.69□□□□□ -1.5
Sec61a1-201ENSMUST00000032168 Lce1gQ9D195 139 aa5.68□□□□□ -1.5
Sec61a1-201ENSMUST00000032168 Sprr2gO70558 76 aa5.68□□□□□ -1.5
Sec61a1-201ENSMUST00000032168 Krtap4-2B1AQ85 167 aa5.66□□□□□ -1.5
Sec61a1-201ENSMUST00000032168 Syne1Q6ZWR6 8799 aa5.65□□□□□ -1.5
Sec61a1-201ENSMUST00000032168 Gm11938Q9D3H4 131 aa5.6□□□□□ -1.51
Sec61a1-201ENSMUST00000032168 Lce1cQ9D1C5 147 aa5.6□□□□□ -1.51
Sec61a1-201ENSMUST00000032168 Syne2Q6ZWQ0 6874 aaKnown RBP5.6□□□□□ -1.51
Sec61a1-201ENSMUST00000032168 Gm11596B1AQB0 205 aa5.58□□□□□ -1.52
Sec61a1-201ENSMUST00000032168 Sprr2dO70555 85 aa5.58□□□□□ -1.52
Sec61a1-201ENSMUST00000032168 Gm11562A0PK51 136 aa5.54□□□□□ -1.52
Sec61a1-201ENSMUST00000032168 Gm11564A2A4L9 201 aa5.53□□□□□ -1.52
Sec61a1-201ENSMUST00000032168 Gm11563B1AQ90 168 aa5.53□□□□□ -1.52
Sec61a1-201ENSMUST00000032168 Gm11595B1AQA7 289 aa5.53□□□□□ -1.52
Sec61a1-201ENSMUST00000032168 Krtap4-8B1AQA8 209 aa5.53□□□□□ -1.52
Sec61a1-201ENSMUST00000032168 Mt4P47945 62 aa5.53□□□□□ -1.52
Sec61a1-201ENSMUST00000032168 Gm38119A0A0A6YX29 146 aa5.5□□□□□ -1.53
Sec61a1-201ENSMUST00000032168 Krtap4-9B1AQA9 244 aa5.44□□□□□ -1.54
Sec61a1-201ENSMUST00000032168 4933428G20RikQ9D3X4 101 aa5.43□□□□□ -1.54
Retrieved 100 of 22,080 RNA–protein pairs in 50.8 ms