RNA–Protein interactions for RNA: ENSMUST00000029422.13

Shox2-201, Transcript of Short stature homeobox protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shox2, Length 3,079 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2-201ENSMUST00000029422 Abca13Q5SSE9 5034 aa9.89□□□□□ -0.83
Shox2-201ENSMUST00000029422 Krtap19-5O08632 62 aa9.89□□□□□ -0.83
Shox2-201ENSMUST00000029422 Gm19426M0QWC7 77 aa9.86□□□□□ -0.83
Shox2-201ENSMUST00000029422 Ndufaf8A2AMZ4 74 aa9.81□□□□□ -0.84
Shox2-201ENSMUST00000029422 Gm17416Q30KP4 66 aa9.74□□□□□ -0.85
Shox2-201ENSMUST00000029422 B930094E09RikQ8C4T2 136 aa9.74□□□□□ -0.85
Shox2-201ENSMUST00000029422 2310057N15RikQ9D6T8 200 aa9.67□□□□□ -0.86
Shox2-201ENSMUST00000029422 Dnah8Q91XQ0 4731 aa9.67□□□□□ -0.86
Shox2-201ENSMUST00000029422 Prm2P07978 107 aa9.67□□□□□ -0.86
Shox2-201ENSMUST00000029422 2210017I01RikA0A0A6YVV1 95 aa9.66□□□□□ -0.86
Shox2-201ENSMUST00000029422 HydinQ80W93 5154 aa9.65□□□□□ -0.86
Shox2-201ENSMUST00000029422 Kiaa1109A2AAE1 5005 aa9.61□□□□□ -0.87
Shox2-201ENSMUST00000029422 BC029722A0A0N4SW31 51 aa9.6□□□□□ -0.87
Shox2-201ENSMUST00000029422 Herc2Q4U2R1 4836 aa9.59□□□□□ -0.87
Shox2-201ENSMUST00000029422 Krtap7-1Q9D3I6 87 aa9.53□□□□□ -0.88
Shox2-201ENSMUST00000029422 PcloQ9QYX7 5068 aa9.49□□□□□ -0.89
Shox2-201ENSMUST00000029422 Krtap13-1Q8K198 168 aa9.48□□□□□ -0.89
Shox2-201ENSMUST00000029422 Gm19402J3QJV4 266 aa9.46□□□□□ -0.89
Shox2-201ENSMUST00000029422 Gm19668J3QMD1 248 aa9.45□□□□□ -0.9
Shox2-201ENSMUST00000029422 Lrp2A2ARV4 4660 aa9.39□□□□□ -0.91
Shox2-201ENSMUST00000029422 Fam229aB2KGE5 128 aa9.35□□□□□ -0.91
Shox2-201ENSMUST00000029422 Gm10318A0A1W2P728 225 aa9.32□□□□□ -0.92
Shox2-201ENSMUST00000029422 Spink7Q6IE32 76 aa9.29□□□□□ -0.92
Shox2-201ENSMUST00000029422 Dnhd1D3Z2X2 4750 aa9.23□□□□□ -0.93
Shox2-201ENSMUST00000029422 Birc6O88738 4882 aa9.17□□□□□ -0.94
Shox2-201ENSMUST00000029422 Crct1Q6PAI5 102 aa9.13□□□□□ -0.95
Shox2-201ENSMUST00000029422 Gm17402F6Z0L5 76 aa9.13□□□□□ -0.95
Shox2-201ENSMUST00000029422 Gm40193A0A1B0GT39 78 aa9.1□□□□□ -0.95
Shox2-201ENSMUST00000029422 Herc1E9PZP8 4859 aa9.06□□□□□ -0.96
Shox2-201ENSMUST00000029422 Krtap1-5A2A590 122 aa9.03□□□□□ -0.96
Shox2-201ENSMUST00000029422 Sec61bQ9CQS8 96 aaKnown RBP9.01□□□□□ -0.97
Shox2-201ENSMUST00000029422 Sprr2a3Q4KL71 83 aa9□□□□□ -0.97
Shox2-201ENSMUST00000029422 Sprr2a1Q9CQK8 83 aa9□□□□□ -0.97
Shox2-201ENSMUST00000029422 Gm9112A2AI92 75 aa8.96□□□□□ -0.97
Shox2-201ENSMUST00000029422 Camk2n1Q6QWF9 78 aa8.94□□□□□ -0.98
Shox2-201ENSMUST00000029422 Krtap16-3Q8C1I6 86 aa8.77□□□□□ -1
Shox2-201ENSMUST00000029422 Ubr4A2AN08 5180 aa8.72□□□□□ -1.01
Shox2-201ENSMUST00000029422 Krtap19-1Q925H2 87 aa8.55□□□□□ -1.04
Shox2-201ENSMUST00000029422 Krtap19-3Q925H6 87 aa8.52□□□□□ -1.04
Shox2-201ENSMUST00000029422 Krtap1-4Q3V2D6 188 aa8.52□□□□□ -1.05
Shox2-201ENSMUST00000029422 Ush2AQ2QI47 5193 aa8.51□□□□□ -1.05
Shox2-201ENSMUST00000029422 Fat4Q2PZL6 4981 aa8.49□□□□□ -1.05
Shox2-201ENSMUST00000029422 Lce1mQ9CR91 182 aa8.47□□□□□ -1.05
Shox2-201ENSMUST00000029422 ZanO88799 5376 aa8.43□□□□□ -1.06
Shox2-201ENSMUST00000029422 Tnp1P10856 55 aa8.4□□□□□ -1.06
Shox2-201ENSMUST00000029422 Hmcn2A2AJ76 5100 aa8.35□□□□□ -1.07
Shox2-201ENSMUST00000029422 Gm18596A0A1W2P860 280 aa8.34□□□□□ -1.07
Shox2-201ENSMUST00000029422 Lce1jD3YUU5 139 aa8.31□□□□□ -1.08
Shox2-201ENSMUST00000029422 4932415D10RikA0A1W2P6U8 4986 aa8.31□□□□□ -1.08
Shox2-201ENSMUST00000029422 Rnf213E9Q555 5152 aaKnown RBP8.14□□□□□ -1.11
Shox2-201ENSMUST00000029422 LorP18165 486 aa8.13□□□□□ -1.11
Shox2-201ENSMUST00000029422 Krtap12-1Q9Z287 130 aa8.09□□□□□ -1.11
Shox2-201ENSMUST00000029422 Krtap1-3A2A588 173 aa8.06□□□□□ -1.12
Shox2-201ENSMUST00000029422 Krtap19-9aF8WH65 55 aa8.06□□□□□ -1.12
Shox2-201ENSMUST00000029422 Krtap17-1A2A5X6 109 aa8.01□□□□□ -1.13
Shox2-201ENSMUST00000029422 Gm9789Q8BIG3 52 aa7.86□□□□□ -1.15
Shox2-201ENSMUST00000029422 Krtap8-1O08633 61 aa7.81□□□□□ -1.16
Shox2-201ENSMUST00000029422 Krtap9-3Q3V2C1 136 aa7.78□□□□□ -1.16
Shox2-201ENSMUST00000029422 Gm7735D3YX18 52 aa7.78□□□□□ -1.16
Shox2-201ENSMUST00000029422 2310046K23RikA0A0A6YVW6 87 aa7.76□□□□□ -1.17
Shox2-201ENSMUST00000029422 Lce1iQ9D6P5 149 aa7.74□□□□□ -1.17
Shox2-201ENSMUST00000029422 Krtap19-9bQ99NG9 58 aa7.73□□□□□ -1.17
Shox2-201ENSMUST00000029422 Lce1a2Q9D1K4 149 aa7.72□□□□□ -1.17
Shox2-201ENSMUST00000029422 Prm1P02319 51 aa7.7□□□□□ -1.18
Shox2-201ENSMUST00000029422 Lce1hQ9D6R3 140 aa7.62□□□□□ -1.19
Shox2-201ENSMUST00000029422 Krtap9-5A2A5X3 358 aa7.54□□□□□ -1.2
Shox2-201ENSMUST00000029422 Krtap19-2Q925I0 141 aa7.51□□□□□ -1.21
Shox2-201ENSMUST00000029422 Lce1dQ9D731 133 aa7.38□□□□□ -1.23
Shox2-201ENSMUST00000029422 SspoQ8CG65 4998 aa7.29□□□□□ -1.24
Shox2-201ENSMUST00000029422 Mdn1A2ANY6 5589 aaKnown RBP7.21□□□□□ -1.26
Shox2-201ENSMUST00000029422 Gm10061D3Z714 54 aa7.19□□□□□ -1.26
Shox2-201ENSMUST00000029422 Mt2P02798 61 aa7.15□□□□□ -1.27
Shox2-201ENSMUST00000029422 Lce1eQ9D139 143 aa7.09□□□□□ -1.28
Shox2-201ENSMUST00000029422 4933428G20RikQ9D3X4 101 aa7.02□□□□□ -1.29
Shox2-201ENSMUST00000029422 Gm6358A0A087WPH4 74 aa7□□□□□ -1.29
Shox2-201ENSMUST00000029422 Sprr2gO70558 76 aa6.97□□□□□ -1.29
Shox2-201ENSMUST00000029422 Gm11938Q9D3H4 131 aa6.95□□□□□ -1.3
Shox2-201ENSMUST00000029422 Gm10272F7CZ33 110 aa6.92□□□□□ -1.3
Shox2-201ENSMUST00000029422 Muc5bE9Q5I3 4800 aa6.9□□□□□ -1.3
Shox2-201ENSMUST00000029422 Gm11569B1AQB1 180 aa6.9□□□□□ -1.3
Shox2-201ENSMUST00000029422 Lce1cQ9D1C5 147 aa6.76□□□□□ -1.33
Shox2-201ENSMUST00000029422 Sprr2dO70555 85 aa6.73□□□□□ -1.33
Shox2-201ENSMUST00000029422 Krtap22-2J3QNX6 67 aa6.64□□□□□ -1.35
Shox2-201ENSMUST00000029422 Gm10100J3QK64 120 aa6.59□□□□□ -1.35
Shox2-201ENSMUST00000029422 Lce1fB9EJP6 147 aa6.51□□□□□ -1.37
Shox2-201ENSMUST00000029422 Lce1a1Q9CQH5 143 aa6.51□□□□□ -1.37
Shox2-201ENSMUST00000029422 Lce3bQ9CQM7 98 aa6.49□□□□□ -1.37
Shox2-201ENSMUST00000029422 Fsip2A2ARZ3 6995 aa6.45□□□□□ -1.38
Shox2-201ENSMUST00000029422 Krtap4-6Q3V4B7 195 aa6.44□□□□□ -1.38
Shox2-201ENSMUST00000029422 Gm10142J3KMP7 120 aa6.42□□□□□ -1.38
Shox2-201ENSMUST00000029422 Syne1Q6ZWR6 8799 aa6.41□□□□□ -1.38
Shox2-201ENSMUST00000029422 Gm11562A0PK51 136 aa6.38□□□□□ -1.39
Shox2-201ENSMUST00000029422 Krtap4-2B1AQ85 167 aa6.28□□□□□ -1.4
Shox2-201ENSMUST00000029422 Lce3cQ91V05 98 aa6.28□□□□□ -1.4
Shox2-201ENSMUST00000029422 Syne2Q6ZWQ0 6874 aaKnown RBP6.26□□□□□ -1.41
Shox2-201ENSMUST00000029422 Krtap4-1Q3UUY3 169 aa6.25□□□□□ -1.41
Shox2-201ENSMUST00000029422 Krtap19-4Q925H7 84 aa6.25□□□□□ -1.41
Shox2-201ENSMUST00000029422 Lce3dE9Q8V1 98 aa6.23□□□□□ -1.41
Shox2-201ENSMUST00000029422 Lce1gQ9D195 139 aa6.22□□□□□ -1.41
Shox2-201ENSMUST00000029422 Sprr2iO70560 76 aa6.14□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 101.9 ms