RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Lrp2A2ARV4 4660 aa8.99□□□□□ -0.97
Ptpra-201ENSMUST00000028769 Mp68P56379 58 aa8.99□□□□□ -0.97
Ptpra-201ENSMUST00000028769 2310057N15RikQ9D6T8 200 aa8.97□□□□□ -0.97
Ptpra-201ENSMUST00000028769 Herc2Q4U2R1 4836 aa8.96□□□□□ -0.98
Ptpra-201ENSMUST00000028769 Krtap3-1A2A591 98 aa8.9□□□□□ -0.99
Ptpra-201ENSMUST00000028769 Romo1P60603 79 aa8.89□□□□□ -0.99
Ptpra-201ENSMUST00000028769 Gm10318A0A1W2P728 225 aa8.88□□□□□ -0.99
Ptpra-201ENSMUST00000028769 Gm21887J3QQ04 176 aa8.87□□□□□ -0.99
Ptpra-201ENSMUST00000028769 Gm20538F6Z9R1 75 aa8.85□□□□□ -0.99
Ptpra-201ENSMUST00000028769 PcloQ9QYX7 5068 aa8.79□□□□□ -1
Ptpra-201ENSMUST00000028769 Dnhd1D3Z2X2 4750 aa8.76□□□□□ -1.01
Ptpra-201ENSMUST00000028769 Gm17416Q30KP4 66 aa8.74□□□□□ -1.01
Ptpra-201ENSMUST00000028769 Crct1Q6PAI5 102 aa8.71□□□□□ -1.02
Ptpra-201ENSMUST00000028769 Prm2P07978 107 aa8.7□□□□□ -1.02
Ptpra-201ENSMUST00000028769 2210017I01RikA0A0A6YVV1 95 aa8.68□□□□□ -1.02
Ptpra-201ENSMUST00000028769 Krtap13-1Q8K198 168 aa8.66□□□□□ -1.02
Ptpra-201ENSMUST00000028769 Gm19426M0QWC7 77 aa8.65□□□□□ -1.03
Ptpra-201ENSMUST00000028769 BC029722A0A0N4SW31 51 aa8.61□□□□□ -1.03
Ptpra-201ENSMUST00000028769 B930094E09RikQ8C4T2 136 aa8.57□□□□□ -1.04
Ptpra-201ENSMUST00000028769 Gm19402J3QJV4 266 aa8.48□□□□□ -1.05
Ptpra-201ENSMUST00000028769 Spink7Q6IE32 76 aa8.48□□□□□ -1.05
Ptpra-201ENSMUST00000028769 Birc6O88738 4882 aa8.44□□□□□ -1.06
Ptpra-201ENSMUST00000028769 Ndufaf8A2AMZ4 74 aa8.41□□□□□ -1.06
Ptpra-201ENSMUST00000028769 Herc1E9PZP8 4859 aa8.36□□□□□ -1.07
Ptpra-201ENSMUST00000028769 Sec61bQ9CQS8 96 aaKnown RBP8.36□□□□□ -1.07
Ptpra-201ENSMUST00000028769 Ubr4A2AN08 5180 aa8.29□□□□□ -1.08
Ptpra-201ENSMUST00000028769 Fam229aB2KGE5 128 aa8.21□□□□□ -1.09
Ptpra-201ENSMUST00000028769 Fat4Q2PZL6 4981 aa8.21□□□□□ -1.09
Ptpra-201ENSMUST00000028769 Gm19668J3QMD1 248 aa8.2□□□□□ -1.1
Ptpra-201ENSMUST00000028769 Krtap1-5A2A590 122 aa8.18□□□□□ -1.1
Ptpra-201ENSMUST00000028769 Krtap16-3Q8C1I6 86 aa8.18□□□□□ -1.1
Ptpra-201ENSMUST00000028769 Krtap7-1Q9D3I6 87 aa8.16□□□□□ -1.1
Ptpra-201ENSMUST00000028769 ZanO88799 5376 aa8.11□□□□□ -1.11
Ptpra-201ENSMUST00000028769 Sprr2a3Q4KL71 83 aa7.99□□□□□ -1.13
Ptpra-201ENSMUST00000028769 Sprr2a1Q9CQK8 83 aa7.99□□□□□ -1.13
Ptpra-201ENSMUST00000028769 Krtap19-1Q925H2 87 aa7.98□□□□□ -1.13
Ptpra-201ENSMUST00000028769 Krtap19-3Q925H6 87 aa7.98□□□□□ -1.13
Ptpra-201ENSMUST00000028769 Camk2n1Q6QWF9 78 aa7.98□□□□□ -1.13
Ptpra-201ENSMUST00000028769 Gm17402F6Z0L5 76 aa7.96□□□□□ -1.13
Ptpra-201ENSMUST00000028769 4932415D10RikA0A1W2P6U8 4986 aa7.93□□□□□ -1.14
Ptpra-201ENSMUST00000028769 Ush2AQ2QI47 5193 aa7.86□□□□□ -1.15
Ptpra-201ENSMUST00000028769 Krtap1-4Q3V2D6 188 aa7.81□□□□□ -1.16
Ptpra-201ENSMUST00000028769 Rnf213E9Q555 5152 aaKnown RBP7.8□□□□□ -1.16
Ptpra-201ENSMUST00000028769 Hmcn2A2AJ76 5100 aa7.77□□□□□ -1.17
Ptpra-201ENSMUST00000028769 LorP18165 486 aa7.75□□□□□ -1.17
Ptpra-201ENSMUST00000028769 Gm9112A2AI92 75 aa7.74□□□□□ -1.17
Ptpra-201ENSMUST00000028769 Lce1jD3YUU5 139 aa7.73□□□□□ -1.17
Ptpra-201ENSMUST00000028769 Gm40193A0A1B0GT39 78 aa7.68□□□□□ -1.18
Ptpra-201ENSMUST00000028769 Krtap17-1A2A5X6 109 aa7.61□□□□□ -1.19
Ptpra-201ENSMUST00000028769 Krtap1-3A2A588 173 aa7.6□□□□□ -1.19
Ptpra-201ENSMUST00000028769 Lce1mQ9CR91 182 aa7.54□□□□□ -1.2
Ptpra-201ENSMUST00000028769 Krtap12-1Q9Z287 130 aa7.48□□□□□ -1.21
Ptpra-201ENSMUST00000028769 Gm18596A0A1W2P860 280 aa7.41□□□□□ -1.22
Ptpra-201ENSMUST00000028769 Krtap19-9aF8WH65 55 aa7.4□□□□□ -1.23
Ptpra-201ENSMUST00000028769 Tnp1P10856 55 aa7.33□□□□□ -1.24
Ptpra-201ENSMUST00000028769 Lce1iQ9D6P5 149 aa7.17□□□□□ -1.26
Ptpra-201ENSMUST00000028769 Lce1a2Q9D1K4 149 aa7.14□□□□□ -1.27
Ptpra-201ENSMUST00000028769 Krtap9-5A2A5X3 358 aa7.13□□□□□ -1.27
Ptpra-201ENSMUST00000028769 Gm9789Q8BIG3 52 aa7.11□□□□□ -1.27
Ptpra-201ENSMUST00000028769 Krtap9-3Q3V2C1 136 aa7.07□□□□□ -1.28
Ptpra-201ENSMUST00000028769 Krtap19-2Q925I0 141 aa7.06□□□□□ -1.28
Ptpra-201ENSMUST00000028769 Krtap8-1O08633 61 aa6.97□□□□□ -1.29
Ptpra-201ENSMUST00000028769 Gm7735D3YX18 52 aa6.96□□□□□ -1.29
Ptpra-201ENSMUST00000028769 SspoQ8CG65 4998 aa6.96□□□□□ -1.3
Ptpra-201ENSMUST00000028769 Prm1P02319 51 aa6.96□□□□□ -1.3
Ptpra-201ENSMUST00000028769 Krtap19-9bQ99NG9 58 aa6.95□□□□□ -1.3
Ptpra-201ENSMUST00000028769 Mdn1A2ANY6 5589 aaKnown RBP6.91□□□□□ -1.3
Ptpra-201ENSMUST00000028769 Lce1hQ9D6R3 140 aa6.89□□□□□ -1.31
Ptpra-201ENSMUST00000028769 2310046K23RikA0A0A6YVW6 87 aa6.69□□□□□ -1.34
Ptpra-201ENSMUST00000028769 Mt2P02798 61 aa6.69□□□□□ -1.34
Ptpra-201ENSMUST00000028769 Gm6358A0A087WPH4 74 aa6.63□□□□□ -1.35
Ptpra-201ENSMUST00000028769 Gm10061D3Z714 54 aa6.6□□□□□ -1.35
Ptpra-201ENSMUST00000028769 Muc5bE9Q5I3 4800 aa6.54□□□□□ -1.36
Ptpra-201ENSMUST00000028769 Lce1dQ9D731 133 aa6.51□□□□□ -1.37
Ptpra-201ENSMUST00000028769 Gm10272F7CZ33 110 aa6.36□□□□□ -1.39
Ptpra-201ENSMUST00000028769 Lce1eQ9D139 143 aa6.25□□□□□ -1.41
Ptpra-201ENSMUST00000028769 Gm11569B1AQB1 180 aa6.22□□□□□ -1.41
Ptpra-201ENSMUST00000028769 Krtap22-2J3QNX6 67 aa6.22□□□□□ -1.41
Ptpra-201ENSMUST00000028769 Lce1cQ9D1C5 147 aa6.07□□□□□ -1.44
Ptpra-201ENSMUST00000028769 Sprr2gO70558 76 aa6.05□□□□□ -1.44
Ptpra-201ENSMUST00000028769 Gm11938Q9D3H4 131 aa6.04□□□□□ -1.44
Ptpra-201ENSMUST00000028769 Syne1Q6ZWR6 8799 aa6.04□□□□□ -1.44
Ptpra-201ENSMUST00000028769 Fsip2A2ARZ3 6995 aa6.03□□□□□ -1.44
Ptpra-201ENSMUST00000028769 4933428G20RikQ9D3X4 101 aa6.02□□□□□ -1.45
Ptpra-201ENSMUST00000028769 Krtap31-1Q9D644 177 aa5.94□□□□□ -1.46
Ptpra-201ENSMUST00000028769 Gm10100J3QK64 120 aa5.85□□□□□ -1.47
Ptpra-201ENSMUST00000028769 Sprr2dO70555 85 aa5.84□□□□□ -1.47
Ptpra-201ENSMUST00000028769 Lce1fB9EJP6 147 aa5.83□□□□□ -1.48
Ptpra-201ENSMUST00000028769 Lce1a1Q9CQH5 143 aa5.83□□□□□ -1.48
Ptpra-201ENSMUST00000028769 Lce3bQ9CQM7 98 aa5.83□□□□□ -1.48
Ptpra-201ENSMUST00000028769 Krtap4-6Q3V4B7 195 aa5.8□□□□□ -1.48
Ptpra-201ENSMUST00000028769 Syne2Q6ZWQ0 6874 aaKnown RBP5.74□□□□□ -1.49
Ptpra-201ENSMUST00000028769 Gm11562A0PK51 136 aa5.67□□□□□ -1.5
Ptpra-201ENSMUST00000028769 Gm38119A0A0A6YX29 146 aa5.66□□□□□ -1.5
Ptpra-201ENSMUST00000028769 Gm10142J3KMP7 120 aa5.66□□□□□ -1.5
Ptpra-201ENSMUST00000028769 Krtap4-1Q3UUY3 169 aa5.61□□□□□ -1.51
Ptpra-201ENSMUST00000028769 Lce3cQ91V05 98 aa5.59□□□□□ -1.51
Ptpra-201ENSMUST00000028769 Muc16A0A140LJ72 8478 aa5.57□□□□□ -1.52
Ptpra-201ENSMUST00000028769 Mt4P47945 62 aa5.55□□□□□ -1.52
Ptpra-201ENSMUST00000028769 Lce3dE9Q8V1 98 aa5.53□□□□□ -1.52
Retrieved 100 of 22,080 RNA–protein pairs in 50.2 ms