RNA–Protein interactions for RNA: ENSMUST00000028767.8

Rtf1-201, Transcript of RNA polymerase-associated protein RTF1 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtf1, Length 4,664 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtf1-201ENSMUST00000028767 Gm20538F6Z9R1 75 aa7.16□□□□□ -1.26
Rtf1-201ENSMUST00000028767 Krtap3-1A2A591 98 aa7.16□□□□□ -1.26
Rtf1-201ENSMUST00000028767 Krtap13-1Q8K198 168 aa7.15□□□□□ -1.27
Rtf1-201ENSMUST00000028767 Crct1Q6PAI5 102 aa7.14□□□□□ -1.27
Rtf1-201ENSMUST00000028767 SacsQ9JLC8 4582 aa7.14□□□□□ -1.27
Rtf1-201ENSMUST00000028767 Mycbp2Q7TPH6 4711 aa7.08□□□□□ -1.28
Rtf1-201ENSMUST00000028767 Pkd1O08852 4293 aa7.04□□□□□ -1.28
Rtf1-201ENSMUST00000028767 Fat3Q8BNA6 4555 aa7.01□□□□□ -1.29
Rtf1-201ENSMUST00000028767 Vps13bQ80TY5 3993 aa6.97□□□□□ -1.29
Rtf1-201ENSMUST00000028767 Ndufaf8A2AMZ4 74 aa6.95□□□□□ -1.3
Rtf1-201ENSMUST00000028767 Fat2Q5F226 4351 aa6.91□□□□□ -1.3
Rtf1-201ENSMUST00000028767 Kiaa1109A2AAE1 5005 aa6.9□□□□□ -1.31
Rtf1-201ENSMUST00000028767 HydinQ80W93 5154 aa6.89□□□□□ -1.31
Rtf1-201ENSMUST00000028767 Gm17402F6Z0L5 76 aa6.85□□□□□ -1.31
Rtf1-201ENSMUST00000028767 Herc2Q4U2R1 4836 aa6.82□□□□□ -1.32
Rtf1-201ENSMUST00000028767 Ryr2E9Q401 4966 aaKnown RBP6.81□□□□□ -1.32
Rtf1-201ENSMUST00000028767 Gm40193A0A1B0GT39 78 aa6.78□□□□□ -1.32
Rtf1-201ENSMUST00000028767 Lrp2A2ARV4 4660 aa6.78□□□□□ -1.32
Rtf1-201ENSMUST00000028767 Dnah8Q91XQ0 4731 aa6.71□□□□□ -1.34
Rtf1-201ENSMUST00000028767 Abca13Q5SSE9 5034 aa6.69□□□□□ -1.34
Rtf1-201ENSMUST00000028767 Krtap1-5A2A590 122 aa6.68□□□□□ -1.34
Rtf1-201ENSMUST00000028767 Tnp1P10856 55 aa6.66□□□□□ -1.34
Rtf1-201ENSMUST00000028767 Pkhd1l1Q80ZA4 4249 aa6.61□□□□□ -1.35
Rtf1-201ENSMUST00000028767 Gm19402J3QJV4 266 aa6.6□□□□□ -1.35
Rtf1-201ENSMUST00000028767 Gm19668J3QMD1 248 aa6.58□□□□□ -1.36
Rtf1-201ENSMUST00000028767 Pkhd1E9PZ36 4059 aa6.56□□□□□ -1.36
Rtf1-201ENSMUST00000028767 Kmt2cQ8BRH4 4903 aa6.56□□□□□ -1.36
Rtf1-201ENSMUST00000028767 Sprr2a3Q4KL71 83 aa6.52□□□□□ -1.37
Rtf1-201ENSMUST00000028767 Sprr2a1Q9CQK8 83 aa6.52□□□□□ -1.37
Rtf1-201ENSMUST00000028767 LorP18165 486 aa6.46□□□□□ -1.38
Rtf1-201ENSMUST00000028767 Dnhd1D3Z2X2 4750 aa6.45□□□□□ -1.38
Rtf1-201ENSMUST00000028767 Krtap1-4Q3V2D6 188 aa6.43□□□□□ -1.38
Rtf1-201ENSMUST00000028767 Prm2P07978 107 aa6.43□□□□□ -1.38
Rtf1-201ENSMUST00000028767 Krtap16-3Q8C1I6 86 aa6.43□□□□□ -1.38
Rtf1-201ENSMUST00000028767 Krtap7-1Q9D3I6 87 aa6.42□□□□□ -1.38
Rtf1-201ENSMUST00000028767 Gm9112A2AI92 75 aa6.41□□□□□ -1.38
Rtf1-201ENSMUST00000028767 Gm18596A0A1W2P860 280 aa6.37□□□□□ -1.39
Rtf1-201ENSMUST00000028767 Krtap19-3Q925H6 87 aa6.34□□□□□ -1.39
Rtf1-201ENSMUST00000028767 Birc6O88738 4882 aa6.34□□□□□ -1.39
Rtf1-201ENSMUST00000028767 Krtap19-1Q925H2 87 aa6.3□□□□□ -1.4
Rtf1-201ENSMUST00000028767 Lce1mQ9CR91 182 aa6.26□□□□□ -1.41
Rtf1-201ENSMUST00000028767 Krtap19-9aF8WH65 55 aa6.25□□□□□ -1.41
Rtf1-201ENSMUST00000028767 Krtap12-1Q9Z287 130 aa6.22□□□□□ -1.41
Rtf1-201ENSMUST00000028767 PcloQ9QYX7 5068 aa6.15□□□□□ -1.43
Rtf1-201ENSMUST00000028767 Herc1E9PZP8 4859 aa6.08□□□□□ -1.44
Rtf1-201ENSMUST00000028767 Ubr4A2AN08 5180 aa6.03□□□□□ -1.44
Rtf1-201ENSMUST00000028767 Krtap1-3A2A588 173 aa6□□□□□ -1.45
Rtf1-201ENSMUST00000028767 Lce1jD3YUU5 139 aa5.97□□□□□ -1.45
Rtf1-201ENSMUST00000028767 Krtap19-9bQ99NG9 58 aa5.92□□□□□ -1.46
Rtf1-201ENSMUST00000028767 Krtap9-5A2A5X3 358 aa5.89□□□□□ -1.47
Rtf1-201ENSMUST00000028767 ZanO88799 5376 aa5.86□□□□□ -1.47
Rtf1-201ENSMUST00000028767 4932415D10RikA0A1W2P6U8 4986 aa5.85□□□□□ -1.47
Rtf1-201ENSMUST00000028767 Prm1P02319 51 aa5.83□□□□□ -1.48
Rtf1-201ENSMUST00000028767 Ush2AQ2QI47 5193 aa5.81□□□□□ -1.48
Rtf1-201ENSMUST00000028767 Fat4Q2PZL6 4981 aa5.79□□□□□ -1.48
Rtf1-201ENSMUST00000028767 Gm7735D3YX18 52 aa5.78□□□□□ -1.48
Rtf1-201ENSMUST00000028767 Gm9789Q8BIG3 52 aa5.78□□□□□ -1.48
Rtf1-201ENSMUST00000028767 Krtap19-2Q925I0 141 aa5.72□□□□□ -1.49
Rtf1-201ENSMUST00000028767 Krtap8-1O08633 61 aa5.72□□□□□ -1.49
Rtf1-201ENSMUST00000028767 Gm6358A0A087WPH4 74 aa5.66□□□□□ -1.5
Rtf1-201ENSMUST00000028767 Rnf213E9Q555 5152 aaKnown RBP5.61□□□□□ -1.51
Rtf1-201ENSMUST00000028767 4933428G20RikQ9D3X4 101 aa5.61□□□□□ -1.51
Rtf1-201ENSMUST00000028767 Hmcn2A2AJ76 5100 aa5.61□□□□□ -1.51
Rtf1-201ENSMUST00000028767 Krtap17-1A2A5X6 109 aa5.59□□□□□ -1.51
Rtf1-201ENSMUST00000028767 Mdn1A2ANY6 5589 aaKnown RBP5.59□□□□□ -1.51
Rtf1-201ENSMUST00000028767 Mt2P02798 61 aa5.56□□□□□ -1.52
Rtf1-201ENSMUST00000028767 Lce1iQ9D6P5 149 aa5.52□□□□□ -1.53
Rtf1-201ENSMUST00000028767 Lce1a2Q9D1K4 149 aa5.47□□□□□ -1.53
Rtf1-201ENSMUST00000028767 Gm10061D3Z714 54 aa5.45□□□□□ -1.54
Rtf1-201ENSMUST00000028767 2310046K23RikA0A0A6YVW6 87 aa5.43□□□□□ -1.54
Rtf1-201ENSMUST00000028767 Gm10272F7CZ33 110 aa5.34□□□□□ -1.56
Rtf1-201ENSMUST00000028767 Krtap22-2J3QNX6 67 aa5.32□□□□□ -1.56
Rtf1-201ENSMUST00000028767 Krtap9-3Q3V2C1 136 aa5.27□□□□□ -1.57
Rtf1-201ENSMUST00000028767 Gm11569B1AQB1 180 aa5.21□□□□□ -1.58
Rtf1-201ENSMUST00000028767 Lce1hQ9D6R3 140 aa5.2□□□□□ -1.58
Rtf1-201ENSMUST00000028767 Sprr2kO70562 68 aa5.12□□□□□ -1.59
Rtf1-201ENSMUST00000028767 Lce3bQ9CQM7 98 aa5.04□□□□□ -1.6
Rtf1-201ENSMUST00000028767 Muc5bE9Q5I3 4800 aa5.04□□□□□ -1.6
Rtf1-201ENSMUST00000028767 Gm10100J3QK64 120 aa5.04□□□□□ -1.6
Rtf1-201ENSMUST00000028767 SspoQ8CG65 4998 aa5.04□□□□□ -1.6
Rtf1-201ENSMUST00000028767 Gm38119A0A0A6YX29 146 aa4.98□□□□□ -1.61
Rtf1-201ENSMUST00000028767 Lce3cQ91V05 98 aa4.94□□□□□ -1.62
Rtf1-201ENSMUST00000028767 Sprr2gO70558 76 aa4.89□□□□□ -1.63
Rtf1-201ENSMUST00000028767 Krtap4-6Q3V4B7 195 aa4.89□□□□□ -1.63
Rtf1-201ENSMUST00000028767 Gm10142J3KMP7 120 aa4.87□□□□□ -1.63
Rtf1-201ENSMUST00000028767 Syne1Q6ZWR6 8799 aa4.86□□□□□ -1.63
Rtf1-201ENSMUST00000028767 Lce3eF8VQJ0 98 aa4.84□□□□□ -1.63
Rtf1-201ENSMUST00000028767 Lce3fQ6PAI4 98 aa4.84□□□□□ -1.63
Rtf1-201ENSMUST00000028767 Fsip2A2ARZ3 6995 aa4.81□□□□□ -1.64
Rtf1-201ENSMUST00000028767 Lce1dQ9D731 133 aa4.77□□□□□ -1.65
Rtf1-201ENSMUST00000028767 Mt4P47945 62 aa4.76□□□□□ -1.65
Rtf1-201ENSMUST00000028767 Krtap4-2B1AQ85 167 aa4.72□□□□□ -1.65
Rtf1-201ENSMUST00000028767 Lce3dE9Q8V1 98 aa4.72□□□□□ -1.65
Rtf1-201ENSMUST00000028767 Krtap4-1Q3UUY3 169 aa4.71□□□□□ -1.66
Rtf1-201ENSMUST00000028767 Gm11938Q9D3H4 131 aa4.67□□□□□ -1.66
Rtf1-201ENSMUST00000028767 Lce1gQ9D195 139 aa4.67□□□□□ -1.66
Rtf1-201ENSMUST00000028767 Krtap19-4Q925H7 84 aa4.65□□□□□ -1.67
Rtf1-201ENSMUST00000028767 Lce3aQ497I5 98 aa4.65□□□□□ -1.67
Rtf1-201ENSMUST00000028767 Sprr2dO70555 85 aa4.63□□□□□ -1.67
Rtf1-201ENSMUST00000028767 Lce1bQ9D149 137 aa4.63□□□□□ -1.67
Retrieved 100 of 22,080 RNA–protein pairs in 78.6 ms