RNA–Protein interactions for RNA: ENSMUST00000028335.12

Grin1-201, Transcript of Glutamate receptor ionotropic, NMDA 1, mousemouse

TSL 1 (best) BASIC

Gene Grin1, Length 4,238 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Grin1-201ENSMUST00000028335 Dync1h1Q9JHU4 4644 aaKnown RBP6.23□□□□□ -1.41
Grin1-201ENSMUST00000028335 Krtap13-1Q8K198 168 aa6.22□□□□□ -1.41
Grin1-201ENSMUST00000028335 Gm18596A0A1W2P860 280 aa6.2□□□□□ -1.42
Grin1-201ENSMUST00000028335 Gm40193A0A1B0GT39 78 aa6.2□□□□□ -1.42
Grin1-201ENSMUST00000028335 Fras1Q80T14 4010 aa6.18□□□□□ -1.42
Grin1-201ENSMUST00000028335 Dnah7cA0A087WR13 4024 aa6.14□□□□□ -1.43
Grin1-201ENSMUST00000028335 Kiaa1109A2AAE1 5005 aa6.12□□□□□ -1.43
Grin1-201ENSMUST00000028335 Pkd1O08852 4293 aa6.12□□□□□ -1.43
Grin1-201ENSMUST00000028335 Fat1A0A1L1SQU7 4645 aa6.1□□□□□ -1.43
Grin1-201ENSMUST00000028335 Hectd4E9Q2E4 4418 aa6.1□□□□□ -1.43
Grin1-201ENSMUST00000028335 Dnah7aE9Q0T8 4024 aa6.06□□□□□ -1.44
Grin1-201ENSMUST00000028335 Herc2Q4U2R1 4836 aa6.04□□□□□ -1.44
Grin1-201ENSMUST00000028335 Tnp1P10856 55 aa6.04□□□□□ -1.44
Grin1-201ENSMUST00000028335 SacsQ9JLC8 4582 aa6.02□□□□□ -1.45
Grin1-201ENSMUST00000028335 LorP18165 486 aa6□□□□□ -1.45
Grin1-201ENSMUST00000028335 Fat3Q8BNA6 4555 aa6□□□□□ -1.45
Grin1-201ENSMUST00000028335 Lrp2A2ARV4 4660 aa5.99□□□□□ -1.45
Grin1-201ENSMUST00000028335 Lrp1Q91ZX7 4545 aaKnown RBP5.98□□□□□ -1.45
Grin1-201ENSMUST00000028335 Krtap3-1A2A591 98 aa5.95□□□□□ -1.46
Grin1-201ENSMUST00000028335 Fat2Q5F226 4351 aa5.88□□□□□ -1.47
Grin1-201ENSMUST00000028335 Ryr2E9Q401 4966 aaKnown RBP5.88□□□□□ -1.47
Grin1-201ENSMUST00000028335 Dnah8Q91XQ0 4731 aa5.86□□□□□ -1.47
Grin1-201ENSMUST00000028335 Lce1mQ9CR91 182 aa5.83□□□□□ -1.48
Grin1-201ENSMUST00000028335 Gm19402J3QJV4 266 aa5.8□□□□□ -1.48
Grin1-201ENSMUST00000028335 Gm17402F6Z0L5 76 aa5.8□□□□□ -1.48
Grin1-201ENSMUST00000028335 Gm19668J3QMD1 248 aa5.8□□□□□ -1.48
Grin1-201ENSMUST00000028335 Krtap7-1Q9D3I6 87 aa5.72□□□□□ -1.49
Grin1-201ENSMUST00000028335 Vps13bQ80TY5 3993 aa5.67□□□□□ -1.5
Grin1-201ENSMUST00000028335 Krtap1-5A2A590 122 aa5.65□□□□□ -1.5
Grin1-201ENSMUST00000028335 Pkhd1E9PZ36 4059 aa5.62□□□□□ -1.51
Grin1-201ENSMUST00000028335 Abca13Q5SSE9 5034 aa5.6□□□□□ -1.51
Grin1-201ENSMUST00000028335 Kmt2cQ8BRH4 4903 aa5.59□□□□□ -1.51
Grin1-201ENSMUST00000028335 PcloQ9QYX7 5068 aa5.58□□□□□ -1.52
Grin1-201ENSMUST00000028335 Krtap1-4Q3V2D6 188 aa5.57□□□□□ -1.52
Grin1-201ENSMUST00000028335 Pkhd1l1Q80ZA4 4249 aa5.55□□□□□ -1.52
Grin1-201ENSMUST00000028335 Krtap19-9aF8WH65 55 aa5.53□□□□□ -1.52
Grin1-201ENSMUST00000028335 Dnhd1D3Z2X2 4750 aa5.52□□□□□ -1.53
Grin1-201ENSMUST00000028335 Mdn1A2ANY6 5589 aaKnown RBP5.49□□□□□ -1.53
Grin1-201ENSMUST00000028335 Krtap16-3Q8C1I6 86 aa5.48□□□□□ -1.53
Grin1-201ENSMUST00000028335 Birc6O88738 4882 aa5.48□□□□□ -1.53
Grin1-201ENSMUST00000028335 Krtap12-1Q9Z287 130 aa5.48□□□□□ -1.53
Grin1-201ENSMUST00000028335 Krtap19-3Q925H6 87 aa5.47□□□□□ -1.53
Grin1-201ENSMUST00000028335 Gm6358A0A087WPH4 74 aa5.44□□□□□ -1.54
Grin1-201ENSMUST00000028335 Sprr2a3Q4KL71 83 aa5.42□□□□□ -1.54
Grin1-201ENSMUST00000028335 Sprr2a1Q9CQK8 83 aa5.42□□□□□ -1.54
Grin1-201ENSMUST00000028335 Prm1P02319 51 aa5.41□□□□□ -1.54
Grin1-201ENSMUST00000028335 Krtap8-1O08633 61 aa5.4□□□□□ -1.54
Grin1-201ENSMUST00000028335 Krtap19-1Q925H2 87 aa5.37□□□□□ -1.55
Grin1-201ENSMUST00000028335 Gm7735D3YX18 52 aa5.36□□□□□ -1.55
Grin1-201ENSMUST00000028335 Herc1E9PZP8 4859 aa5.35□□□□□ -1.55
Grin1-201ENSMUST00000028335 Sprr2kO70562 68 aa5.34□□□□□ -1.55
Grin1-201ENSMUST00000028335 Ubr4A2AN08 5180 aa5.32□□□□□ -1.56
Grin1-201ENSMUST00000028335 Krtap9-5A2A5X3 358 aa5.31□□□□□ -1.56
Grin1-201ENSMUST00000028335 Krtap1-3A2A588 173 aa5.27□□□□□ -1.57
Grin1-201ENSMUST00000028335 4933428G20RikQ9D3X4 101 aa5.24□□□□□ -1.57
Grin1-201ENSMUST00000028335 Gm9789Q8BIG3 52 aa5.2□□□□□ -1.58
Grin1-201ENSMUST00000028335 4932415D10RikA0A1W2P6U8 4986 aa5.19□□□□□ -1.58
Grin1-201ENSMUST00000028335 Krtap19-9bQ99NG9 58 aa5.17□□□□□ -1.58
Grin1-201ENSMUST00000028335 Rnf213E9Q555 5152 aaKnown RBP5.16□□□□□ -1.58
Grin1-201ENSMUST00000028335 Lce1jD3YUU5 139 aa5.05□□□□□ -1.6
Grin1-201ENSMUST00000028335 Ush2AQ2QI47 5193 aa5.04□□□□□ -1.6
Grin1-201ENSMUST00000028335 Krtap19-2Q925I0 141 aa5.03□□□□□ -1.6
Grin1-201ENSMUST00000028335 Gm10061D3Z714 54 aa5□□□□□ -1.61
Grin1-201ENSMUST00000028335 Fat4Q2PZL6 4981 aa4.99□□□□□ -1.61
Grin1-201ENSMUST00000028335 Mt2P02798 61 aa4.97□□□□□ -1.61
Grin1-201ENSMUST00000028335 Sprr2gO70558 76 aa4.96□□□□□ -1.62
Grin1-201ENSMUST00000028335 Gm11569B1AQB1 180 aa4.92□□□□□ -1.62
Grin1-201ENSMUST00000028335 ZanO88799 5376 aa4.9□□□□□ -1.63
Grin1-201ENSMUST00000028335 Gm38119A0A0A6YX29 146 aa4.88□□□□□ -1.63
Grin1-201ENSMUST00000028335 Hmcn2A2AJ76 5100 aa4.86□□□□□ -1.63
Grin1-201ENSMUST00000028335 Krtap22-2J3QNX6 67 aa4.85□□□□□ -1.63
Grin1-201ENSMUST00000028335 Syne1Q6ZWR6 8799 aa4.83□□□□□ -1.64
Grin1-201ENSMUST00000028335 Fsip2A2ARZ3 6995 aa4.77□□□□□ -1.65
Grin1-201ENSMUST00000028335 Gm10272F7CZ33 110 aa4.76□□□□□ -1.65
Grin1-201ENSMUST00000028335 Krtap4-2B1AQ85 167 aa4.76□□□□□ -1.65
Grin1-201ENSMUST00000028335 Lce3bQ9CQM7 98 aa4.73□□□□□ -1.65
Grin1-201ENSMUST00000028335 Krtap4-6Q3V4B7 195 aa4.71□□□□□ -1.66
Grin1-201ENSMUST00000028335 Krtap17-1A2A5X6 109 aa4.7□□□□□ -1.66
Grin1-201ENSMUST00000028335 Gm11562A0PK51 136 aa4.67□□□□□ -1.66
Grin1-201ENSMUST00000028335 2310046K23RikA0A0A6YVW6 87 aa4.64□□□□□ -1.67
Grin1-201ENSMUST00000028335 Lce3cQ91V05 98 aa4.62□□□□□ -1.67
Grin1-201ENSMUST00000028335 Muc16A0A140LJ72 8478 aa4.62□□□□□ -1.67
Grin1-201ENSMUST00000028335 Mt4P47945 62 aa4.62□□□□□ -1.67
Grin1-201ENSMUST00000028335 Lce1iQ9D6P5 149 aa4.61□□□□□ -1.67
Grin1-201ENSMUST00000028335 Lce1gQ9D195 139 aa4.6□□□□□ -1.67
Grin1-201ENSMUST00000028335 Lce1a2Q9D1K4 149 aa4.54□□□□□ -1.68
Grin1-201ENSMUST00000028335 Gm10100J3QK64 120 aa4.51□□□□□ -1.69
Grin1-201ENSMUST00000028335 Krtap4-1Q3UUY3 169 aa4.51□□□□□ -1.69
Grin1-201ENSMUST00000028335 Macf1Q9QXZ0 7354 aaKnown RBP4.45□□□□□ -1.7
Grin1-201ENSMUST00000028335 Gm11596B1AQB0 205 aa4.45□□□□□ -1.7
Grin1-201ENSMUST00000028335 Lce3eF8VQJ0 98 aa4.45□□□□□ -1.7
Grin1-201ENSMUST00000028335 Lce3fQ6PAI4 98 aa4.45□□□□□ -1.7
Grin1-201ENSMUST00000028335 Sprr2iO70560 76 aa4.44□□□□□ -1.7
Grin1-201ENSMUST00000028335 Lce1bQ9D149 137 aa4.44□□□□□ -1.7
Grin1-201ENSMUST00000028335 Muc5bE9Q5I3 4800 aa4.43□□□□□ -1.7
Grin1-201ENSMUST00000028335 Lce1lQ9D1G7 135 aa4.42□□□□□ -1.7
Grin1-201ENSMUST00000028335 Krtap4-9B1AQA9 244 aa4.41□□□□□ -1.7
Grin1-201ENSMUST00000028335 Gm11564A2A4L9 201 aa4.39□□□□□ -1.71
Grin1-201ENSMUST00000028335 Gm11563B1AQ90 168 aa4.39□□□□□ -1.71
Grin1-201ENSMUST00000028335 Gm11595B1AQA7 289 aa4.39□□□□□ -1.71
Retrieved 100 of 22,080 RNA–protein pairs in 50 ms