RNA–Protein interactions for RNA: ENSMUST00000026826.13

Rab40c-201, Transcript of Ras-related protein Rab-40C, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rab40c, Length 2,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40c-201ENSMUST00000026826 Gm17416Q30KP4 66 aa12.79□□□□□ -0.36
Rab40c-201ENSMUST00000026826 Gm9955Q8CEJ8 102 aa12.79□□□□□ -0.36
Rab40c-201ENSMUST00000026826 Krtap3-1A2A591 98 aa12.74□□□□□ -0.37
Rab40c-201ENSMUST00000026826 Lrp2A2ARV4 4660 aa12.68□□□□□ -0.38
Rab40c-201ENSMUST00000026826 PcloQ9QYX7 5068 aa12.57□□□□□ -0.4
Rab40c-201ENSMUST00000026826 2210017I01RikA0A0A6YVV1 95 aa12.56□□□□□ -0.4
Rab40c-201ENSMUST00000026826 CriptO70333 101 aa12.47□□□□□ -0.41
Rab40c-201ENSMUST00000026826 2310057N15RikQ9D6T8 200 aa12.46□□□□□ -0.41
Rab40c-201ENSMUST00000026826 Krtap13-1Q8K198 168 aa12.37□□□□□ -0.43
Rab40c-201ENSMUST00000026826 Gm12216A0A1W2P827 62 aa12.27□□□□□ -0.45
Rab40c-201ENSMUST00000026826 Romo1P60603 79 aa12.22□□□□□ -0.45
Rab40c-201ENSMUST00000026826 BC029722A0A0N4SW31 51 aa12.14□□□□□ -0.47
Rab40c-201ENSMUST00000026826 Sec61bQ9CQS8 96 aaKnown RBP12.13□□□□□ -0.47
Rab40c-201ENSMUST00000026826 Gm10318A0A1W2P728 225 aa12.11□□□□□ -0.47
Rab40c-201ENSMUST00000026826 Gm21887J3QQ04 176 aa12.06□□□□□ -0.48
Rab40c-201ENSMUST00000026826 Crct1Q6PAI5 102 aa12.06□□□□□ -0.48
Rab40c-201ENSMUST00000026826 Herc1E9PZP8 4859 aa12.05□□□□□ -0.48
Rab40c-201ENSMUST00000026826 B930094E09RikQ8C4T2 136 aa12.03□□□□□ -0.48
Rab40c-201ENSMUST00000026826 Krtap1-5A2A590 122 aa12.01□□□□□ -0.49
Rab40c-201ENSMUST00000026826 Gm19426M0QWC7 77 aa11.96□□□□□ -0.49
Rab40c-201ENSMUST00000026826 Krtap16-3Q8C1I6 86 aa11.93□□□□□ -0.5
Rab40c-201ENSMUST00000026826 Gm19402J3QJV4 266 aa11.81□□□□□ -0.52
Rab40c-201ENSMUST00000026826 Fam229aB2KGE5 128 aa11.76□□□□□ -0.53
Rab40c-201ENSMUST00000026826 Krtap19-1Q925H2 87 aa11.74□□□□□ -0.53
Rab40c-201ENSMUST00000026826 Lce1mQ9CR91 182 aa11.72□□□□□ -0.53
Rab40c-201ENSMUST00000026826 Krtap19-3Q925H6 87 aa11.67□□□□□ -0.54
Rab40c-201ENSMUST00000026826 Gm17402F6Z0L5 76 aa11.64□□□□□ -0.55
Rab40c-201ENSMUST00000026826 Spink7Q6IE32 76 aa11.62□□□□□ -0.55
Rab40c-201ENSMUST00000026826 Ush2AQ2QI47 5193 aa11.58□□□□□ -0.56
Rab40c-201ENSMUST00000026826 Sprr2a3Q4KL71 83 aa11.52□□□□□ -0.57
Rab40c-201ENSMUST00000026826 Sprr2a1Q9CQK8 83 aa11.52□□□□□ -0.57
Rab40c-201ENSMUST00000026826 Ubr4A2AN08 5180 aa11.51□□□□□ -0.57
Rab40c-201ENSMUST00000026826 ZanO88799 5376 aa11.51□□□□□ -0.57
Rab40c-201ENSMUST00000026826 Hmcn2A2AJ76 5100 aa11.5□□□□□ -0.57
Rab40c-201ENSMUST00000026826 4932415D10RikA0A1W2P6U8 4986 aa11.4□□□□□ -0.59
Rab40c-201ENSMUST00000026826 Mp68P56379 58 aa11.33□□□□□ -0.6
Rab40c-201ENSMUST00000026826 Krtap7-1Q9D3I6 87 aa11.33□□□□□ -0.6
Rab40c-201ENSMUST00000026826 Krtap1-4Q3V2D6 188 aa11.32□□□□□ -0.6
Rab40c-201ENSMUST00000026826 Fat4Q2PZL6 4981 aa11.31□□□□□ -0.6
Rab40c-201ENSMUST00000026826 Krtap1-3A2A588 173 aa11.26□□□□□ -0.61
Rab40c-201ENSMUST00000026826 Gm18596A0A1W2P860 280 aa11.22□□□□□ -0.61
Rab40c-201ENSMUST00000026826 Gm20538F6Z9R1 75 aa11.16□□□□□ -0.62
Rab40c-201ENSMUST00000026826 Gm9789Q8BIG3 52 aa11.08□□□□□ -0.64
Rab40c-201ENSMUST00000026826 Lce1jD3YUU5 139 aa11.06□□□□□ -0.64
Rab40c-201ENSMUST00000026826 LorP18165 486 aa11.06□□□□□ -0.64
Rab40c-201ENSMUST00000026826 Gm19668J3QMD1 248 aa10.98□□□□□ -0.65
Rab40c-201ENSMUST00000026826 Camk2n1Q6QWF9 78 aa10.98□□□□□ -0.65
Rab40c-201ENSMUST00000026826 Prm1P02319 51 aa10.89□□□□□ -0.67
Rab40c-201ENSMUST00000026826 Gm40193A0A1B0GT39 78 aa10.87□□□□□ -0.67
Rab40c-201ENSMUST00000026826 Gm7735D3YX18 52 aa10.87□□□□□ -0.67
Rab40c-201ENSMUST00000026826 Rnf213E9Q555 5152 aaKnown RBP10.86□□□□□ -0.67
Rab40c-201ENSMUST00000026826 Krtap12-1Q9Z287 130 aa10.83□□□□□ -0.68
Rab40c-201ENSMUST00000026826 Krtap19-9aF8WH65 55 aa10.74□□□□□ -0.69
Rab40c-201ENSMUST00000026826 Krtap17-1A2A5X6 109 aa10.72□□□□□ -0.69
Rab40c-201ENSMUST00000026826 Ndufaf8A2AMZ4 74 aa10.69□□□□□ -0.7
Rab40c-201ENSMUST00000026826 Prm2P07978 107 aa10.56□□□□□ -0.72
Rab40c-201ENSMUST00000026826 SspoQ8CG65 4998 aa10.43□□□□□ -0.74
Rab40c-201ENSMUST00000026826 Lce1iQ9D6P5 149 aa10.35□□□□□ -0.75
Rab40c-201ENSMUST00000026826 Krtap19-2Q925I0 141 aa10.32□□□□□ -0.76
Rab40c-201ENSMUST00000026826 Krtap9-5A2A5X3 358 aa10.28□□□□□ -0.76
Rab40c-201ENSMUST00000026826 Lce1a2Q9D1K4 149 aa10.28□□□□□ -0.76
Rab40c-201ENSMUST00000026826 Tnp1P10856 55 aa10.19□□□□□ -0.78
Rab40c-201ENSMUST00000026826 Krtap8-1O08633 61 aa10.16□□□□□ -0.78
Rab40c-201ENSMUST00000026826 Krtap19-9bQ99NG9 58 aa10.01□□□□□ -0.81
Rab40c-201ENSMUST00000026826 Gm10061D3Z714 54 aa10□□□□□ -0.81
Rab40c-201ENSMUST00000026826 Krtap9-3Q3V2C1 136 aa9.89□□□□□ -0.83
Rab40c-201ENSMUST00000026826 Muc5bE9Q5I3 4800 aa9.76□□□□□ -0.85
Rab40c-201ENSMUST00000026826 Lce1hQ9D6R3 140 aa9.73□□□□□ -0.85
Rab40c-201ENSMUST00000026826 Gm6358A0A087WPH4 74 aa9.7□□□□□ -0.86
Rab40c-201ENSMUST00000026826 2310046K23RikA0A0A6YVW6 87 aa9.66□□□□□ -0.86
Rab40c-201ENSMUST00000026826 Mt2P02798 61 aa9.65□□□□□ -0.86
Rab40c-201ENSMUST00000026826 Gm9112A2AI92 75 aa9.47□□□□□ -0.89
Rab40c-201ENSMUST00000026826 Gm11569B1AQB1 180 aa9.42□□□□□ -0.9
Rab40c-201ENSMUST00000026826 Mdn1A2ANY6 5589 aaKnown RBP9.17□□□□□ -0.94
Rab40c-201ENSMUST00000026826 Krtap22-2J3QNX6 67 aa9.02□□□□□ -0.97
Rab40c-201ENSMUST00000026826 Lce1dQ9D731 133 aa9.02□□□□□ -0.97
Rab40c-201ENSMUST00000026826 Gm10272F7CZ33 110 aa8.87□□□□□ -0.99
Rab40c-201ENSMUST00000026826 Lce1eQ9D139 143 aa8.73□□□□□ -1.01
Rab40c-201ENSMUST00000026826 Sprr2gO70558 76 aa8.69□□□□□ -1.02
Rab40c-201ENSMUST00000026826 Krtap4-6Q3V4B7 195 aa8.62□□□□□ -1.03
Rab40c-201ENSMUST00000026826 Gm11938Q9D3H4 131 aa8.56□□□□□ -1.04
Rab40c-201ENSMUST00000026826 Sprr2dO70555 85 aa8.53□□□□□ -1.04
Rab40c-201ENSMUST00000026826 Gm11555B1AQ89 175 aa8.47□□□□□ -1.05
Rab40c-201ENSMUST00000026826 Krtap4-1Q3UUY3 169 aa8.42□□□□□ -1.06
Rab40c-201ENSMUST00000026826 Lce1cQ9D1C5 147 aa8.41□□□□□ -1.06
Rab40c-201ENSMUST00000026826 Lce1gQ9D195 139 aa8.41□□□□□ -1.06
Rab40c-201ENSMUST00000026826 Gm11562A0PK51 136 aa8.37□□□□□ -1.07
Rab40c-201ENSMUST00000026826 4933428G20RikQ9D3X4 101 aa8.37□□□□□ -1.07
Rab40c-201ENSMUST00000026826 Krtap4-2B1AQ85 167 aa8.35□□□□□ -1.07
Rab40c-201ENSMUST00000026826 Syne1Q6ZWR6 8799 aa8.27□□□□□ -1.09
Rab40c-201ENSMUST00000026826 Syne2Q6ZWQ0 6874 aaKnown RBP8.26□□□□□ -1.09
Rab40c-201ENSMUST00000026826 Gm11596B1AQB0 205 aa8.23□□□□□ -1.09
Rab40c-201ENSMUST00000026826 Gm11564A2A4L9 201 aa8.13□□□□□ -1.11
Rab40c-201ENSMUST00000026826 Gm11563B1AQ90 168 aa8.13□□□□□ -1.11
Rab40c-201ENSMUST00000026826 Gm11595B1AQA7 289 aa8.13□□□□□ -1.11
Rab40c-201ENSMUST00000026826 Krtap4-8B1AQA8 209 aa8.13□□□□□ -1.11
Rab40c-201ENSMUST00000026826 Fsip2A2ARZ3 6995 aa8.12□□□□□ -1.11
Rab40c-201ENSMUST00000026826 Lce1fB9EJP6 147 aa8.08□□□□□ -1.12
Rab40c-201ENSMUST00000026826 Mt4P47945 62 aa8.08□□□□□ -1.12
Rab40c-201ENSMUST00000026826 Lce1a1Q9CQH5 143 aa8.08□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 7.8 ms