RNA–Protein interactions for RNA: ENSMUST00000021519.6

Six6-201, Transcript of Homeobox protein SIX6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Six6, Length 4,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Six6-201ENSMUST00000021519 Dnah1E9Q8T7 4250 aa4.71□□□□□ -1.66
Six6-201ENSMUST00000021519 Krtap3-1A2A591 98 aa4.69□□□□□ -1.66
Six6-201ENSMUST00000021519 Mycbp2Q7TPH6 4711 aa4.67□□□□□ -1.66
Six6-201ENSMUST00000021519 Gm17402F6Z0L5 76 aa4.63□□□□□ -1.67
Six6-201ENSMUST00000021519 Fat1A0A1L1SQU7 4645 aa4.61□□□□□ -1.67
Six6-201ENSMUST00000021519 SacsQ9JLC8 4582 aa4.6□□□□□ -1.67
Six6-201ENSMUST00000021519 Lrp1Q91ZX7 4545 aaKnown RBP4.59□□□□□ -1.67
Six6-201ENSMUST00000021519 Pkd1O08852 4293 aa4.57□□□□□ -1.68
Six6-201ENSMUST00000021519 Hectd4E9Q2E4 4418 aa4.57□□□□□ -1.68
Six6-201ENSMUST00000021519 Kiaa1109A2AAE1 5005 aa4.55□□□□□ -1.68
Six6-201ENSMUST00000021519 Dnah7cA0A087WR13 4024 aa4.55□□□□□ -1.68
Six6-201ENSMUST00000021519 Fras1Q80T14 4010 aa4.55□□□□□ -1.68
Six6-201ENSMUST00000021519 Herc2Q4U2R1 4836 aa4.52□□□□□ -1.69
Six6-201ENSMUST00000021519 Tnp1P10856 55 aa4.51□□□□□ -1.69
Six6-201ENSMUST00000021519 Fat3Q8BNA6 4555 aa4.5□□□□□ -1.69
Six6-201ENSMUST00000021519 Dnah7aE9Q0T8 4024 aa4.49□□□□□ -1.69
Six6-201ENSMUST00000021519 HydinQ80W93 5154 aa4.49□□□□□ -1.69
Six6-201ENSMUST00000021519 Krtap1-5A2A590 122 aa4.46□□□□□ -1.7
Six6-201ENSMUST00000021519 Ryr2E9Q401 4966 aaKnown RBP4.46□□□□□ -1.7
Six6-201ENSMUST00000021519 Lrp2A2ARV4 4660 aa4.45□□□□□ -1.7
Six6-201ENSMUST00000021519 Dnah8Q91XQ0 4731 aa4.44□□□□□ -1.7
Six6-201ENSMUST00000021519 Gm18596A0A1W2P860 280 aa4.42□□□□□ -1.7
Six6-201ENSMUST00000021519 Gm19668J3QMD1 248 aa4.42□□□□□ -1.7
Six6-201ENSMUST00000021519 Krtap7-1Q9D3I6 87 aa4.41□□□□□ -1.7
Six6-201ENSMUST00000021519 Fat2Q5F226 4351 aa4.37□□□□□ -1.71
Six6-201ENSMUST00000021519 LorP18165 486 aa4.36□□□□□ -1.71
Six6-201ENSMUST00000021519 Lce1mQ9CR91 182 aa4.33□□□□□ -1.72
Six6-201ENSMUST00000021519 Vps13bQ80TY5 3993 aa4.32□□□□□ -1.72
Six6-201ENSMUST00000021519 Sprr2a3Q4KL71 83 aa4.3□□□□□ -1.72
Six6-201ENSMUST00000021519 Sprr2a1Q9CQK8 83 aa4.3□□□□□ -1.72
Six6-201ENSMUST00000021519 Krtap1-4Q3V2D6 188 aa4.3□□□□□ -1.72
Six6-201ENSMUST00000021519 Gm19402J3QJV4 266 aa4.29□□□□□ -1.72
Six6-201ENSMUST00000021519 A0A1Y7VJH8 109 aa4.26□□□□□ -1.73
Six6-201ENSMUST00000021519 Krtap16-3Q8C1I6 86 aa4.24□□□□□ -1.73
Six6-201ENSMUST00000021519 Abca13Q5SSE9 5034 aa4.24□□□□□ -1.73
Six6-201ENSMUST00000021519 Dnhd1D3Z2X2 4750 aa4.23□□□□□ -1.73
Six6-201ENSMUST00000021519 Krtap28-10A0A1Y7VP58 119 aa4.23□□□□□ -1.73
Six6-201ENSMUST00000021519 Krtap19-9aF8WH65 55 aa4.23□□□□□ -1.73
Six6-201ENSMUST00000021519 Krtap19-3Q925H6 87 aa4.21□□□□□ -1.73
Six6-201ENSMUST00000021519 Birc6O88738 4882 aa4.19□□□□□ -1.74
Six6-201ENSMUST00000021519 Krtap19-1Q925H2 87 aa4.18□□□□□ -1.74
Six6-201ENSMUST00000021519 Krtap12-1Q9Z287 130 aa4.18□□□□□ -1.74
Six6-201ENSMUST00000021519 A0A1Y7VLE6 161 aa4.17□□□□□ -1.74
Six6-201ENSMUST00000021519 Kmt2cQ8BRH4 4903 aa4.14□□□□□ -1.75
Six6-201ENSMUST00000021519 Pkhd1l1Q80ZA4 4249 aa4.09□□□□□ -1.75
Six6-201ENSMUST00000021519 Pkhd1E9PZ36 4059 aa4.09□□□□□ -1.76
Six6-201ENSMUST00000021519 Krtap28-13A0A087WQP5 138 aa4.09□□□□□ -1.76
Six6-201ENSMUST00000021519 Prm1P02319 51 aa4.08□□□□□ -1.76
Six6-201ENSMUST00000021519 PcloQ9QYX7 5068 aa4.03□□□□□ -1.76
Six6-201ENSMUST00000021519 Gm7735D3YX18 52 aa4.02□□□□□ -1.77
Six6-201ENSMUST00000021519 Krtap1-3A2A588 173 aa4.01□□□□□ -1.77
Six6-201ENSMUST00000021519 Herc1E9PZP8 4859 aa3.99□□□□□ -1.77
Six6-201ENSMUST00000021519 Krtap19-9bQ99NG9 58 aa3.98□□□□□ -1.77
Six6-201ENSMUST00000021519 Gm9789Q8BIG3 52 aa3.97□□□□□ -1.77
Six6-201ENSMUST00000021519 Krtap9-5A2A5X3 358 aa3.96□□□□□ -1.78
Six6-201ENSMUST00000021519 A030005L19RikA0A1Y7VIU2 113 aa3.95□□□□□ -1.78
Six6-201ENSMUST00000021519 Krtap8-1O08633 61 aa3.93□□□□□ -1.78
Six6-201ENSMUST00000021519 4933428G20RikQ9D3X4 101 aa3.89□□□□□ -1.79
Six6-201ENSMUST00000021519 A030005K14RikA0A1Y7VNY1 122 aa3.88□□□□□ -1.79
Six6-201ENSMUST00000021519 Lce1jD3YUU5 139 aa3.88□□□□□ -1.79
Six6-201ENSMUST00000021519 Ubr4A2AN08 5180 aa3.86□□□□□ -1.79
Six6-201ENSMUST00000021519 4932415D10RikA0A1W2P6U8 4986 aa3.86□□□□□ -1.79
Six6-201ENSMUST00000021519 Krtap19-2Q925I0 141 aa3.84□□□□□ -1.79
Six6-201ENSMUST00000021519 Gm6358A0A087WPH4 74 aa3.83□□□□□ -1.8
Six6-201ENSMUST00000021519 Ush2AQ2QI47 5193 aa3.78□□□□□ -1.8
Six6-201ENSMUST00000021519 Fat4Q2PZL6 4981 aa3.77□□□□□ -1.81
Six6-201ENSMUST00000021519 Mdn1A2ANY6 5589 aaKnown RBP3.75□□□□□ -1.81
Six6-201ENSMUST00000021519 A0A1Y7VJ07 166 aa3.75□□□□□ -1.81
Six6-201ENSMUST00000021519 Mt2P02798 61 aa3.73□□□□□ -1.81
Six6-201ENSMUST00000021519 ZanO88799 5376 aa3.73□□□□□ -1.81
Six6-201ENSMUST00000021519 2310046K23RikA0A0A6YVW6 87 aa3.73□□□□□ -1.81
Six6-201ENSMUST00000021519 Gm10061D3Z714 54 aa3.73□□□□□ -1.81
Six6-201ENSMUST00000021519 A030003K21RikA0A1Y7VIM3 128 aa3.7□□□□□ -1.82
Six6-201ENSMUST00000021519 Gm7544A0A1Y7VJ58 118 aa3.68□□□□□ -1.82
Six6-201ENSMUST00000021519 Rnf213E9Q555 5152 aaKnown RBP3.65□□□□□ -1.83
Six6-201ENSMUST00000021519 Sprr2kO70562 68 aa3.65□□□□□ -1.83
Six6-201ENSMUST00000021519 Krtap22-2J3QNX6 67 aa3.63□□□□□ -1.83
Six6-201ENSMUST00000021519 Hmcn2A2AJ76 5100 aa3.61□□□□□ -1.83
Six6-201ENSMUST00000021519 Gm11569B1AQB1 180 aa3.59□□□□□ -1.84
Six6-201ENSMUST00000021519 Lce1iQ9D6P5 149 aa3.59□□□□□ -1.84
Six6-201ENSMUST00000021519 Krtap17-1A2A5X6 109 aa3.54□□□□□ -1.84
Six6-201ENSMUST00000021519 A030014E15RikA0A1Y7VJV2 120 aa3.54□□□□□ -1.84
Six6-201ENSMUST00000021519 Gm10272F7CZ33 110 aa3.54□□□□□ -1.84
Six6-201ENSMUST00000021519 Krtap4-1Q3UUY3 169 aa3.53□□□□□ -1.84
Six6-201ENSMUST00000021519 Lce1a2Q9D1K4 149 aa3.53□□□□□ -1.84
Six6-201ENSMUST00000021519 Lce3bQ9CQM7 98 aa3.45□□□□□ -1.86
Six6-201ENSMUST00000021519 Gm6217A0A1Y7VJK9 128 aa3.45□□□□□ -1.86
Six6-201ENSMUST00000021519 Gm38119A0A0A6YX29 146 aa3.41□□□□□ -1.86
Six6-201ENSMUST00000021519 Sprr2gO70558 76 aa3.41□□□□□ -1.86
Six6-201ENSMUST00000021519 Lce3cQ91V05 98 aa3.36□□□□□ -1.87
Six6-201ENSMUST00000021519 Krtap4-6Q3V4B7 195 aa3.35□□□□□ -1.87
Six6-201ENSMUST00000021519 Gm10100J3QK64 120 aa3.35□□□□□ -1.87
Six6-201ENSMUST00000021519 Krtap4-2B1AQ85 167 aa3.34□□□□□ -1.88
Six6-201ENSMUST00000021519 Muc5bE9Q5I3 4800 aa3.32□□□□□ -1.88
Six6-201ENSMUST00000021519 Krtap9-3Q3V2C1 136 aa3.32□□□□□ -1.88
Six6-201ENSMUST00000021519 Lce1hQ9D6R3 140 aa3.3□□□□□ -1.88
Six6-201ENSMUST00000021519 Lce1gQ9D195 139 aa3.29□□□□□ -1.88
Six6-201ENSMUST00000021519 Gm11563B1AQ90 168 aa3.28□□□□□ -1.88
Six6-201ENSMUST00000021519 Krtap4-7Q9D732 168 aa3.28□□□□□ -1.88
Six6-201ENSMUST00000021519 SspoQ8CG65 4998 aa3.28□□□□□ -1.88
Retrieved 100 of 22,080 RNA–protein pairs in 107.6 ms