RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Gm3880A0A1B0GSB3 72 aa10.87□□□□□ -0.67
Trim47-201ENSMUST00000021120 Cox6b2Q80ZN9 88 aa10.8□□□□□ -0.68
Trim47-201ENSMUST00000021120 Krtap15-1Q9QZU5 150 aa10.74□□□□□ -0.69
Trim47-201ENSMUST00000021120 Prm2P07978 107 aa10.68□□□□□ -0.7
Trim47-201ENSMUST00000021120 Herc1E9PZP8 4859 aa10.67□□□□□ -0.7
Trim47-201ENSMUST00000021120 Rpl37Q9D823 97 aa10.64□□□□□ -0.71
Trim47-201ENSMUST00000021120 CriptO70333 101 aa10.6□□□□□ -0.71
Trim47-201ENSMUST00000021120 Gm9955Q8CEJ8 102 aa10.52□□□□□ -0.73
Trim47-201ENSMUST00000021120 Gm18596A0A1W2P860 280 aa10.5□□□□□ -0.73
Trim47-201ENSMUST00000021120 Rnase13Q5GAM7 153 aa10.49□□□□□ -0.73
Trim47-201ENSMUST00000021120 Sec61bQ9CQS8 96 aaKnown RBP10.39□□□□□ -0.75
Trim47-201ENSMUST00000021120 Gm10382Q3V0T5 144 aa10.37□□□□□ -0.75
Trim47-201ENSMUST00000021120 Ndufaf8A2AMZ4 74 aa10.34□□□□□ -0.75
Trim47-201ENSMUST00000021120 2310057N15RikQ9D6T8 200 aa10.33□□□□□ -0.76
Trim47-201ENSMUST00000021120 Gm17606F6ZL36 78 aa10.29□□□□□ -0.76
Trim47-201ENSMUST00000021120 Ush2AQ2QI47 5193 aa10.25□□□□□ -0.77
Trim47-201ENSMUST00000021120 Gm17416Q30KP4 66 aa10.23□□□□□ -0.77
Trim47-201ENSMUST00000021120 Prm1P02319 51 aa10.19□□□□□ -0.78
Trim47-201ENSMUST00000021120 Gm9789Q8BIG3 52 aa10.17□□□□□ -0.78
Trim47-201ENSMUST00000021120 Hmcn2A2AJ76 5100 aa10.12□□□□□ -0.79
Trim47-201ENSMUST00000021120 Gm7735D3YX18 52 aa10.11□□□□□ -0.79
Trim47-201ENSMUST00000021120 Krtap3-1A2A591 98 aa10.11□□□□□ -0.79
Trim47-201ENSMUST00000021120 Ubr4A2AN08 5180 aa10.03□□□□□ -0.8
Trim47-201ENSMUST00000021120 Crct1Q6PAI5 102 aa10.01□□□□□ -0.81
Trim47-201ENSMUST00000021120 Krtap16-3Q8C1I6 86 aa9.93□□□□□ -0.82
Trim47-201ENSMUST00000021120 2210017I01RikA0A0A6YVV1 95 aa9.91□□□□□ -0.82
Trim47-201ENSMUST00000021120 Fam229aB2KGE5 128 aa9.91□□□□□ -0.82
Trim47-201ENSMUST00000021120 Gm21887J3QQ04 176 aa9.91□□□□□ -0.82
Trim47-201ENSMUST00000021120 Krtap1-3A2A588 173 aa9.87□□□□□ -0.83
Trim47-201ENSMUST00000021120 4932415D10RikA0A1W2P6U8 4986 aa9.86□□□□□ -0.83
Trim47-201ENSMUST00000021120 Krtap19-1Q925H2 87 aa9.86□□□□□ -0.83
Trim47-201ENSMUST00000021120 Krtap13-1Q8K198 168 aa9.84□□□□□ -0.83
Trim47-201ENSMUST00000021120 Krtap19-3Q925H6 87 aa9.83□□□□□ -0.84
Trim47-201ENSMUST00000021120 Gm10318A0A1W2P728 225 aa9.8□□□□□ -0.84
Trim47-201ENSMUST00000021120 Krtap7-1Q9D3I6 87 aa9.79□□□□□ -0.84
Trim47-201ENSMUST00000021120 B930094E09RikQ8C4T2 136 aa9.78□□□□□ -0.84
Trim47-201ENSMUST00000021120 Gm19426M0QWC7 77 aa9.78□□□□□ -0.84
Trim47-201ENSMUST00000021120 ZanO88799 5376 aa9.71□□□□□ -0.85
Trim47-201ENSMUST00000021120 Gm9112A2AI92 75 aa9.69□□□□□ -0.86
Trim47-201ENSMUST00000021120 Krtap1-5A2A590 122 aa9.68□□□□□ -0.86
Trim47-201ENSMUST00000021120 Gm40193A0A1B0GT39 78 aa9.66□□□□□ -0.86
Trim47-201ENSMUST00000021120 LorP18165 486 aa9.64□□□□□ -0.87
Trim47-201ENSMUST00000021120 Gm19402J3QJV4 266 aa9.63□□□□□ -0.87
Trim47-201ENSMUST00000021120 BC029722A0A0N4SW31 51 aa9.6□□□□□ -0.87
Trim47-201ENSMUST00000021120 Gm17402F6Z0L5 76 aa9.55□□□□□ -0.88
Trim47-201ENSMUST00000021120 Fat4Q2PZL6 4981 aa9.51□□□□□ -0.89
Trim47-201ENSMUST00000021120 Rnf213E9Q555 5152 aaKnown RBP9.48□□□□□ -0.89
Trim47-201ENSMUST00000021120 Krtap1-4Q3V2D6 188 aa9.47□□□□□ -0.89
Trim47-201ENSMUST00000021120 Gm19668J3QMD1 248 aa9.37□□□□□ -0.91
Trim47-201ENSMUST00000021120 Sprr2a3Q4KL71 83 aa9.23□□□□□ -0.93
Trim47-201ENSMUST00000021120 Sprr2a1Q9CQK8 83 aa9.23□□□□□ -0.93
Trim47-201ENSMUST00000021120 SspoQ8CG65 4998 aa9.09□□□□□ -0.95
Trim47-201ENSMUST00000021120 Gm10061D3Z714 54 aa9.07□□□□□ -0.96
Trim47-201ENSMUST00000021120 Spink7Q6IE32 76 aa9.07□□□□□ -0.96
Trim47-201ENSMUST00000021120 Lce1jD3YUU5 139 aa8.95□□□□□ -0.98
Trim47-201ENSMUST00000021120 Krtap12-1Q9Z287 130 aa8.95□□□□□ -0.98
Trim47-201ENSMUST00000021120 Krtap19-9aF8WH65 55 aa8.83□□□□□ -1
Trim47-201ENSMUST00000021120 Krtap19-2Q925I0 141 aa8.78□□□□□ -1
Trim47-201ENSMUST00000021120 Camk2n1Q6QWF9 78 aa8.75□□□□□ -1.01
Trim47-201ENSMUST00000021120 Krtap9-5A2A5X3 358 aa8.74□□□□□ -1.01
Trim47-201ENSMUST00000021120 Krtap17-1A2A5X6 109 aa8.7□□□□□ -1.02
Trim47-201ENSMUST00000021120 Gm11569B1AQB1 180 aa8.69□□□□□ -1.02
Trim47-201ENSMUST00000021120 Muc5bE9Q5I3 4800 aa8.44□□□□□ -1.06
Trim47-201ENSMUST00000021120 Tnp1P10856 55 aa8.41□□□□□ -1.06
Trim47-201ENSMUST00000021120 Lce1iQ9D6P5 149 aa8.4□□□□□ -1.06
Trim47-201ENSMUST00000021120 Gm6358A0A087WPH4 74 aa8.33□□□□□ -1.08
Trim47-201ENSMUST00000021120 Lce1a2Q9D1K4 149 aa8.29□□□□□ -1.08
Trim47-201ENSMUST00000021120 Krtap4-2B1AQ85 167 aa8.13□□□□□ -1.11
Trim47-201ENSMUST00000021120 Lce1gQ9D195 139 aa8.1□□□□□ -1.11
Trim47-201ENSMUST00000021120 Mt2P02798 61 aa8.09□□□□□ -1.11
Trim47-201ENSMUST00000021120 2310046K23RikA0A0A6YVW6 87 aa8.09□□□□□ -1.12
Trim47-201ENSMUST00000021120 Krtap8-1O08633 61 aa8.05□□□□□ -1.12
Trim47-201ENSMUST00000021120 Gm11555B1AQ89 175 aa8.02□□□□□ -1.13
Trim47-201ENSMUST00000021120 Mdn1A2ANY6 5589 aaKnown RBP8.02□□□□□ -1.13
Trim47-201ENSMUST00000021120 Krtap4-6Q3V4B7 195 aa7.95□□□□□ -1.14
Trim47-201ENSMUST00000021120 Gm11562A0PK51 136 aa7.95□□□□□ -1.14
Trim47-201ENSMUST00000021120 Krtap19-9bQ99NG9 58 aa7.9□□□□□ -1.14
Trim47-201ENSMUST00000021120 Gm11596B1AQB0 205 aa7.84□□□□□ -1.15
Trim47-201ENSMUST00000021120 Syne2Q6ZWQ0 6874 aaKnown RBP7.83□□□□□ -1.16
Trim47-201ENSMUST00000021120 Krtap4-1Q3UUY3 169 aa7.79□□□□□ -1.16
Trim47-201ENSMUST00000021120 Krtap22-2J3QNX6 67 aa7.67□□□□□ -1.18
Trim47-201ENSMUST00000021120 Krtap9-3Q3V2C1 136 aa7.65□□□□□ -1.18
Trim47-201ENSMUST00000021120 Gm11564A2A4L9 201 aa7.58□□□□□ -1.2
Trim47-201ENSMUST00000021120 Gm11563B1AQ90 168 aa7.58□□□□□ -1.2
Trim47-201ENSMUST00000021120 Gm11595B1AQA7 289 aa7.58□□□□□ -1.2
Trim47-201ENSMUST00000021120 Krtap4-8B1AQA8 209 aa7.58□□□□□ -1.2
Trim47-201ENSMUST00000021120 Lce1hQ9D6R3 140 aa7.58□□□□□ -1.2
Trim47-201ENSMUST00000021120 Krtap4-9B1AQA9 244 aa7.38□□□□□ -1.23
Trim47-201ENSMUST00000021120 Mt4P47945 62 aa7.37□□□□□ -1.23
Trim47-201ENSMUST00000021120 Lce1dQ9D731 133 aa7.29□□□□□ -1.24
Trim47-201ENSMUST00000021120 4933428G20RikQ9D3X4 101 aa7.21□□□□□ -1.25
Trim47-201ENSMUST00000021120 Lce1bQ9D149 137 aa7.2□□□□□ -1.26
Trim47-201ENSMUST00000021120 Fsip2A2ARZ3 6995 aa7.19□□□□□ -1.26
Trim47-201ENSMUST00000021120 Sprr2gO70558 76 aa7.19□□□□□ -1.26
Trim47-201ENSMUST00000021120 Gm38119A0A0A6YX29 146 aa7.12□□□□□ -1.27
Trim47-201ENSMUST00000021120 Krtap4-13Q9D7P3 165 aa7.11□□□□□ -1.27
Trim47-201ENSMUST00000021120 Sprr2dO70555 85 aa7.05□□□□□ -1.28
Trim47-201ENSMUST00000021120 Gm11938Q9D3H4 131 aa7.05□□□□□ -1.28
Trim47-201ENSMUST00000021120 Lce1eQ9D139 143 aa7.04□□□□□ -1.28
Trim47-201ENSMUST00000021120 Sprr2kO70562 68 aa7.03□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 11.7 ms