RNA–Protein interactions for RNA: ENSMUST00000020441.12

Vps13d-201, Transcript of Vacuolar protein sorting 13D, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Vps13d, Length 15,665 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13d-201ENSMUST00000020441 Hspg2Q05793 3707 aaKnown RBP2.45□□□□□ -2.02
Vps13d-201ENSMUST00000020441 Dnah7cA0A087WR13 4024 aa2.45□□□□□ -2.02
Vps13d-201ENSMUST00000020441 Dnah9B1AR51 4484 aa2.43□□□□□ -2.02
Vps13d-201ENSMUST00000020441 Birc6O88738 4882 aa2.43□□□□□ -2.02
Vps13d-201ENSMUST00000020441 HydinQ80W93 5154 aa2.43□□□□□ -2.02
Vps13d-201ENSMUST00000020441 Sprr2a3Q4KL71 83 aa2.42□□□□□ -2.02
Vps13d-201ENSMUST00000020441 Sprr2a1Q9CQK8 83 aa2.42□□□□□ -2.02
Vps13d-201ENSMUST00000020441 Krtap19-9aF8WH65 55 aa2.42□□□□□ -2.02
Vps13d-201ENSMUST00000020441 ApobE9Q414 4505 aa2.42□□□□□ -2.02
Vps13d-201ENSMUST00000020441 Hectd4E9Q2E4 4418 aa2.41□□□□□ -2.02
Vps13d-201ENSMUST00000020441 Kiaa1109A2AAE1 5005 aa2.4□□□□□ -2.02
Vps13d-201ENSMUST00000020441 Fras1Q80T14 4010 aa2.4□□□□□ -2.03
Vps13d-201ENSMUST00000020441 CubnQ9JLB4 3623 aa2.4□□□□□ -2.03
Vps13d-201ENSMUST00000020441 Dync2h1Q45VK7 4306 aa2.39□□□□□ -2.03
Vps13d-201ENSMUST00000020441 Lrp1bQ9JI18 4599 aa2.39□□□□□ -2.03
Vps13d-201ENSMUST00000020441 Krtap19-9bQ99NG9 58 aa2.38□□□□□ -2.03
Vps13d-201ENSMUST00000020441 PcloQ9QYX7 5068 aa2.37□□□□□ -2.03
Vps13d-201ENSMUST00000020441 Ryr3A2AGL3 4863 aa2.37□□□□□ -2.03
Vps13d-201ENSMUST00000020441 SacsQ9JLC8 4582 aa2.37□□□□□ -2.03
Vps13d-201ENSMUST00000020441 Dnah11E9Q7N9 4488 aa2.37□□□□□ -2.03
Vps13d-201ENSMUST00000020441 Pkd1O08852 4293 aa2.36□□□□□ -2.03
Vps13d-201ENSMUST00000020441 Fat1A0A1L1SQU7 4645 aa2.36□□□□□ -2.03
Vps13d-201ENSMUST00000020441 Herc1E9PZP8 4859 aa2.36□□□□□ -2.03
Vps13d-201ENSMUST00000020441 Dnhd1D3Z2X2 4750 aa2.35□□□□□ -2.03
Vps13d-201ENSMUST00000020441 Lrp2A2ARV4 4660 aa2.35□□□□□ -2.03
Vps13d-201ENSMUST00000020441 Krtap7-1Q9D3I6 87 aa2.34□□□□□ -2.04
Vps13d-201ENSMUST00000020441 Herc2Q4U2R1 4836 aa2.33□□□□□ -2.04
Vps13d-201ENSMUST00000020441 Fat3Q8BNA6 4555 aa2.32□□□□□ -2.04
Vps13d-201ENSMUST00000020441 Krtap8-1O08633 61 aa2.3□□□□□ -2.04
Vps13d-201ENSMUST00000020441 Abca13Q5SSE9 5034 aa2.3□□□□□ -2.04
Vps13d-201ENSMUST00000020441 Vps13bQ80TY5 3993 aa2.29□□□□□ -2.04
Vps13d-201ENSMUST00000020441 Mycbp2Q7TPH6 4711 aa2.29□□□□□ -2.04
Vps13d-201ENSMUST00000020441 Krtap1-4Q3V2D6 188 aa2.28□□□□□ -2.04
Vps13d-201ENSMUST00000020441 Krtap12-1Q9Z287 130 aa2.26□□□□□ -2.05
Vps13d-201ENSMUST00000020441 Crct1Q6PAI5 102 aa2.26□□□□□ -2.05
Vps13d-201ENSMUST00000020441 Ubr4A2AN08 5180 aa2.24□□□□□ -2.05
Vps13d-201ENSMUST00000020441 Rnf213E9Q555 5152 aaKnown RBP2.23□□□□□ -2.05
Vps13d-201ENSMUST00000020441 Gm6358A0A087WPH4 74 aa2.23□□□□□ -2.05
Vps13d-201ENSMUST00000020441 Gm10318A0A1W2P728 225 aa2.21□□□□□ -2.06
Vps13d-201ENSMUST00000020441 4932415D10RikA0A1W2P6U8 4986 aa2.2□□□□□ -2.06
Vps13d-201ENSMUST00000020441 Pkhd1l1Q80ZA4 4249 aa2.18□□□□□ -2.06
Vps13d-201ENSMUST00000020441 Gm19402J3QJV4 266 aa2.18□□□□□ -2.06
Vps13d-201ENSMUST00000020441 Fat2Q5F226 4351 aa2.17□□□□□ -2.06
Vps13d-201ENSMUST00000020441 Mdn1A2ANY6 5589 aaKnown RBP2.16□□□□□ -2.06
Vps13d-201ENSMUST00000020441 Sprr2kO70562 68 aa2.14□□□□□ -2.07
Vps13d-201ENSMUST00000020441 Gm18596A0A1W2P860 280 aa2.14□□□□□ -2.07
Vps13d-201ENSMUST00000020441 2310046K23RikA0A0A6YVW6 87 aa2.14□□□□□ -2.07
Vps13d-201ENSMUST00000020441 Kmt2cQ8BRH4 4903 aa2.12□□□□□ -2.07
Vps13d-201ENSMUST00000020441 Fat4Q2PZL6 4981 aa2.12□□□□□ -2.07
Vps13d-201ENSMUST00000020441 Lrp1Q91ZX7 4545 aaKnown RBP2.11□□□□□ -2.07
Vps13d-201ENSMUST00000020441 Pkhd1E9PZ36 4059 aa2.11□□□□□ -2.07
Vps13d-201ENSMUST00000020441 Sprr2gO70558 76 aa2.11□□□□□ -2.07
Vps13d-201ENSMUST00000020441 LorP18165 486 aa2.11□□□□□ -2.07
Vps13d-201ENSMUST00000020441 Muc5bE9Q5I3 4800 aa2.1□□□□□ -2.07
Vps13d-201ENSMUST00000020441 Hmcn2A2AJ76 5100 aa2.07□□□□□ -2.08
Vps13d-201ENSMUST00000020441 Prm1P02319 51 aa2.07□□□□□ -2.08
Vps13d-201ENSMUST00000020441 Lce3bQ9CQM7 98 aa2.05□□□□□ -2.08
Vps13d-201ENSMUST00000020441 Lce1mQ9CR91 182 aa2.05□□□□□ -2.08
Vps13d-201ENSMUST00000020441 ZanO88799 5376 aa2.05□□□□□ -2.08
Vps13d-201ENSMUST00000020441 Krtap16-3Q8C1I6 86 aa2.03□□□□□ -2.08
Vps13d-201ENSMUST00000020441 Ush2AQ2QI47 5193 aa2.02□□□□□ -2.09
Vps13d-201ENSMUST00000020441 Gm10100J3QK64 120 aa2.02□□□□□ -2.09
Vps13d-201ENSMUST00000020441 Lce3cQ91V05 98 aa2.01□□□□□ -2.09
Vps13d-201ENSMUST00000020441 Krtap19-3Q925H6 87 aa2.01□□□□□ -2.09
Vps13d-201ENSMUST00000020441 Krtap19-1Q925H2 87 aa1.99□□□□□ -2.09
Vps13d-201ENSMUST00000020441 Lce3dE9Q8V1 98 aa1.98□□□□□ -2.09
Vps13d-201ENSMUST00000020441 Krtap9-5A2A5X3 358 aa1.97□□□□□ -2.09
Vps13d-201ENSMUST00000020441 Gm10142J3KMP7 120 aa1.97□□□□□ -2.09
Vps13d-201ENSMUST00000020441 Krtap22-2J3QNX6 67 aa1.96□□□□□ -2.1
Vps13d-201ENSMUST00000020441 Gm10272F7CZ33 110 aa1.95□□□□□ -2.1
Vps13d-201ENSMUST00000020441 Lce3eF8VQJ0 98 aa1.95□□□□□ -2.1
Vps13d-201ENSMUST00000020441 Lce3fQ6PAI4 98 aa1.95□□□□□ -2.1
Vps13d-201ENSMUST00000020441 Gm7735D3YX18 52 aa1.93□□□□□ -2.1
Vps13d-201ENSMUST00000020441 Mt2P02798 61 aa1.92□□□□□ -2.1
Vps13d-201ENSMUST00000020441 Sprr2iO70560 76 aa1.92□□□□□ -2.1
Vps13d-201ENSMUST00000020441 Lce3aQ497I5 98 aa1.92□□□□□ -2.1
Vps13d-201ENSMUST00000020441 Krtap19-4Q925H7 84 aa1.91□□□□□ -2.1
Vps13d-201ENSMUST00000020441 Gm9789Q8BIG3 52 aa1.89□□□□□ -2.11
Vps13d-201ENSMUST00000020441 Krtap19-2Q925I0 141 aa1.87□□□□□ -2.11
Vps13d-201ENSMUST00000020441 SspoQ8CG65 4998 aa1.86□□□□□ -2.11
Vps13d-201ENSMUST00000020441 Krtap9-3Q3V2C1 136 aa1.86□□□□□ -2.11
Vps13d-201ENSMUST00000020441 Krtap1-3A2A588 173 aa1.85□□□□□ -2.11
Vps13d-201ENSMUST00000020441 Gm10024A0A0A0MQA4 119 aa1.83□□□□□ -2.12
Vps13d-201ENSMUST00000020441 Eppk1Q8R0W0 6548 aa1.81□□□□□ -2.12
Vps13d-201ENSMUST00000020441 Syne2Q6ZWQ0 6874 aaKnown RBP1.81□□□□□ -2.12
Vps13d-201ENSMUST00000020441 Gm10061D3Z714 54 aa1.78□□□□□ -2.12
Vps13d-201ENSMUST00000020441 Lce1jD3YUU5 139 aa1.78□□□□□ -2.12
Vps13d-201ENSMUST00000020441 Gm11639A0A1D5RLM8 5808 aa1.77□□□□□ -2.13
Vps13d-201ENSMUST00000020441 Sprr2fO70557 76 aa1.77□□□□□ -2.13
Vps13d-201ENSMUST00000020441 Lce1bQ9D149 137 aa1.77□□□□□ -2.13
Vps13d-201ENSMUST00000020441 Lce1fB9EJP6 147 aa1.76□□□□□ -2.13
Vps13d-201ENSMUST00000020441 Lce1cQ9D1C5 147 aa1.76□□□□□ -2.13
Vps13d-201ENSMUST00000020441 Lce1lQ9D1G7 135 aa1.76□□□□□ -2.13
Vps13d-201ENSMUST00000020441 Lce1dQ9D731 133 aa1.76□□□□□ -2.13
Vps13d-201ENSMUST00000020441 Fsip2A2ARZ3 6995 aa1.76□□□□□ -2.13
Vps13d-201ENSMUST00000020441 Sprr2dO70555 85 aa1.75□□□□□ -2.13
Vps13d-201ENSMUST00000020441 Lce1eQ9D139 143 aa1.75□□□□□ -2.13
Vps13d-201ENSMUST00000020441 Sprr2hO70559 108 aa1.74□□□□□ -2.13
Vps13d-201ENSMUST00000020441 Gm38119A0A0A6YX29 146 aa1.73□□□□□ -2.13
Vps13d-201ENSMUST00000020441 Lce1gQ9D195 139 aa1.73□□□□□ -2.13
Retrieved 100 of 22,080 RNA–protein pairs in 56.4 ms