RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Kiaa1109A2AAE1 5005 aa5.69□□□□□ -1.5
Vps54-201ENSMUST00000006221 Gm17416Q30KP4 66 aa5.67□□□□□ -1.5
Vps54-201ENSMUST00000006221 Herc2Q4U2R1 4836 aa5.65□□□□□ -1.51
Vps54-201ENSMUST00000006221 Romo1P60603 79 aa5.63□□□□□ -1.51
Vps54-201ENSMUST00000006221 Lrp2A2ARV4 4660 aa5.61□□□□□ -1.51
Vps54-201ENSMUST00000006221 2210017I01RikA0A0A6YVV1 95 aa5.59□□□□□ -1.52
Vps54-201ENSMUST00000006221 Gm21887J3QQ04 176 aa5.58□□□□□ -1.52
Vps54-201ENSMUST00000006221 2310057N15RikQ9D6T8 200 aa5.55□□□□□ -1.52
Vps54-201ENSMUST00000006221 PcloQ9QYX7 5068 aa5.54□□□□□ -1.52
Vps54-201ENSMUST00000006221 Dnhd1D3Z2X2 4750 aa5.54□□□□□ -1.52
Vps54-201ENSMUST00000006221 Krtap13-1Q8K198 168 aa5.5□□□□□ -1.53
Vps54-201ENSMUST00000006221 Birc6O88738 4882 aa5.46□□□□□ -1.54
Vps54-201ENSMUST00000006221 B930094E09RikQ8C4T2 136 aa5.46□□□□□ -1.54
Vps54-201ENSMUST00000006221 Gm19426M0QWC7 77 aa5.45□□□□□ -1.54
Vps54-201ENSMUST00000006221 Mp68P56379 58 aa5.44□□□□□ -1.54
Vps54-201ENSMUST00000006221 BC029722A0A0N4SW31 51 aa5.42□□□□□ -1.54
Vps54-201ENSMUST00000006221 Gm20538F6Z9R1 75 aa5.39□□□□□ -1.55
Vps54-201ENSMUST00000006221 Gm10318A0A1W2P728 225 aa5.38□□□□□ -1.55
Vps54-201ENSMUST00000006221 Gm19402J3QJV4 266 aa5.38□□□□□ -1.55
Vps54-201ENSMUST00000006221 Crct1Q6PAI5 102 aa5.33□□□□□ -1.56
Vps54-201ENSMUST00000006221 Krtap1-5A2A590 122 aa5.3□□□□□ -1.56
Vps54-201ENSMUST00000006221 Krtap7-1Q9D3I6 87 aa5.27□□□□□ -1.57
Vps54-201ENSMUST00000006221 Sec61bQ9CQS8 96 aaKnown RBP5.25□□□□□ -1.57
Vps54-201ENSMUST00000006221 Krtap16-3Q8C1I6 86 aa5.24□□□□□ -1.57
Vps54-201ENSMUST00000006221 Herc1E9PZP8 4859 aa5.24□□□□□ -1.57
Vps54-201ENSMUST00000006221 Ubr4A2AN08 5180 aa5.21□□□□□ -1.58
Vps54-201ENSMUST00000006221 Gm17402F6Z0L5 76 aa5.21□□□□□ -1.58
Vps54-201ENSMUST00000006221 Spink7Q6IE32 76 aa5.19□□□□□ -1.58
Vps54-201ENSMUST00000006221 Sprr2a3Q4KL71 83 aa5.17□□□□□ -1.58
Vps54-201ENSMUST00000006221 Sprr2a1Q9CQK8 83 aa5.17□□□□□ -1.58
Vps54-201ENSMUST00000006221 Gm19668J3QMD1 248 aa5.17□□□□□ -1.58
Vps54-201ENSMUST00000006221 ZanO88799 5376 aa5.16□□□□□ -1.58
Vps54-201ENSMUST00000006221 Krtap19-1Q925H2 87 aa5.14□□□□□ -1.59
Vps54-201ENSMUST00000006221 Ndufaf8A2AMZ4 74 aa5.12□□□□□ -1.59
Vps54-201ENSMUST00000006221 Fam229aB2KGE5 128 aa5.11□□□□□ -1.59
Vps54-201ENSMUST00000006221 Krtap19-3Q925H6 87 aa5.11□□□□□ -1.59
Vps54-201ENSMUST00000006221 Fat4Q2PZL6 4981 aa5.1□□□□□ -1.59
Vps54-201ENSMUST00000006221 4932415D10RikA0A1W2P6U8 4986 aa5.08□□□□□ -1.6
Vps54-201ENSMUST00000006221 Krtap1-4Q3V2D6 188 aa5□□□□□ -1.61
Vps54-201ENSMUST00000006221 Ush2AQ2QI47 5193 aa4.99□□□□□ -1.61
Vps54-201ENSMUST00000006221 Gm40193A0A1B0GT39 78 aa4.99□□□□□ -1.61
Vps54-201ENSMUST00000006221 Hmcn2A2AJ76 5100 aa4.98□□□□□ -1.61
Vps54-201ENSMUST00000006221 Camk2n1Q6QWF9 78 aa4.93□□□□□ -1.62
Vps54-201ENSMUST00000006221 Lce1jD3YUU5 139 aa4.91□□□□□ -1.62
Vps54-201ENSMUST00000006221 Rnf213E9Q555 5152 aaKnown RBP4.89□□□□□ -1.63
Vps54-201ENSMUST00000006221 Prm2P07978 107 aa4.89□□□□□ -1.63
Vps54-201ENSMUST00000006221 Krtap1-3A2A588 173 aa4.85□□□□□ -1.63
Vps54-201ENSMUST00000006221 LorP18165 486 aa4.8□□□□□ -1.64
Vps54-201ENSMUST00000006221 Lce1mQ9CR91 182 aa4.78□□□□□ -1.64
Vps54-201ENSMUST00000006221 Krtap17-1A2A5X6 109 aa4.76□□□□□ -1.65
Vps54-201ENSMUST00000006221 Krtap12-1Q9Z287 130 aa4.76□□□□□ -1.65
Vps54-201ENSMUST00000006221 Krtap19-9aF8WH65 55 aa4.72□□□□□ -1.65
Vps54-201ENSMUST00000006221 A0A1Y7VLE6 161 aa4.7□□□□□ -1.66
Vps54-201ENSMUST00000006221 Tnp1P10856 55 aa4.62□□□□□ -1.67
Vps54-201ENSMUST00000006221 Gm9112A2AI92 75 aa4.59□□□□□ -1.67
Vps54-201ENSMUST00000006221 Lce1iQ9D6P5 149 aa4.59□□□□□ -1.68
Vps54-201ENSMUST00000006221 Gm9789Q8BIG3 52 aa4.58□□□□□ -1.68
Vps54-201ENSMUST00000006221 Gm18596A0A1W2P860 280 aa4.57□□□□□ -1.68
Vps54-201ENSMUST00000006221 Lce1a2Q9D1K4 149 aa4.56□□□□□ -1.68
Vps54-201ENSMUST00000006221 Krtap8-1O08633 61 aa4.53□□□□□ -1.68
Vps54-201ENSMUST00000006221 Krtap19-2Q925I0 141 aa4.5□□□□□ -1.69
Vps54-201ENSMUST00000006221 Krtap9-3Q3V2C1 136 aa4.5□□□□□ -1.69
Vps54-201ENSMUST00000006221 Krtap9-5A2A5X3 358 aa4.48□□□□□ -1.69
Vps54-201ENSMUST00000006221 SspoQ8CG65 4998 aa4.48□□□□□ -1.69
Vps54-201ENSMUST00000006221 Krtap19-9bQ99NG9 58 aa4.45□□□□□ -1.7
Vps54-201ENSMUST00000006221 Gm7735D3YX18 52 aa4.45□□□□□ -1.7
Vps54-201ENSMUST00000006221 Prm1P02319 51 aa4.42□□□□□ -1.7
Vps54-201ENSMUST00000006221 Lce1hQ9D6R3 140 aa4.4□□□□□ -1.7
Vps54-201ENSMUST00000006221 2310046K23RikA0A0A6YVW6 87 aa4.4□□□□□ -1.71
Vps54-201ENSMUST00000006221 A0A1Y7VJH8 109 aa4.25□□□□□ -1.73
Vps54-201ENSMUST00000006221 Mt2P02798 61 aa4.23□□□□□ -1.73
Vps54-201ENSMUST00000006221 Gm6358A0A087WPH4 74 aa4.22□□□□□ -1.73
Vps54-201ENSMUST00000006221 Muc5bE9Q5I3 4800 aa4.21□□□□□ -1.74
Vps54-201ENSMUST00000006221 Gm10061D3Z714 54 aa4.19□□□□□ -1.74
Vps54-201ENSMUST00000006221 A030003K21RikA0A1Y7VIM3 128 aa4.19□□□□□ -1.74
Vps54-201ENSMUST00000006221 Lce1dQ9D731 133 aa4.18□□□□□ -1.74
Vps54-201ENSMUST00000006221 Krtap28-10A0A1Y7VP58 119 aa4.17□□□□□ -1.74
Vps54-201ENSMUST00000006221 Mdn1A2ANY6 5589 aaKnown RBP4.09□□□□□ -1.76
Vps54-201ENSMUST00000006221 Gm7544A0A1Y7VJ58 118 aa4.06□□□□□ -1.76
Vps54-201ENSMUST00000006221 Lce1eQ9D139 143 aa4.03□□□□□ -1.76
Vps54-201ENSMUST00000006221 A030005L19RikA0A1Y7VIU2 113 aa3.99□□□□□ -1.77
Vps54-201ENSMUST00000006221 Gm10272F7CZ33 110 aa3.96□□□□□ -1.78
Vps54-201ENSMUST00000006221 Sprr2gO70558 76 aa3.95□□□□□ -1.78
Vps54-201ENSMUST00000006221 Gm11938Q9D3H4 131 aa3.93□□□□□ -1.78
Vps54-201ENSMUST00000006221 Krtap22-2J3QNX6 67 aa3.93□□□□□ -1.78
Vps54-201ENSMUST00000006221 Krtap28-13A0A087WQP5 138 aa3.89□□□□□ -1.79
Vps54-201ENSMUST00000006221 Gm11569B1AQB1 180 aa3.89□□□□□ -1.79
Vps54-201ENSMUST00000006221 A030005K14RikA0A1Y7VNY1 122 aa3.87□□□□□ -1.79
Vps54-201ENSMUST00000006221 Gm6217A0A1Y7VJK9 128 aa3.87□□□□□ -1.79
Vps54-201ENSMUST00000006221 Sprr2dO70555 85 aa3.86□□□□□ -1.79
Vps54-201ENSMUST00000006221 Lce1cQ9D1C5 147 aa3.85□□□□□ -1.79
Vps54-201ENSMUST00000006221 4933428G20RikQ9D3X4 101 aa3.81□□□□□ -1.8
Vps54-201ENSMUST00000006221 Gm11562A0PK51 136 aa3.73□□□□□ -1.81
Vps54-201ENSMUST00000006221 Syne1Q6ZWR6 8799 aa3.71□□□□□ -1.82
Vps54-201ENSMUST00000006221 Lce1fB9EJP6 147 aa3.7□□□□□ -1.82
Vps54-201ENSMUST00000006221 Lce1a1Q9CQH5 143 aa3.7□□□□□ -1.82
Vps54-201ENSMUST00000006221 Gm10100J3QK64 120 aa3.65□□□□□ -1.82
Vps54-201ENSMUST00000006221 Lce3bQ9CQM7 98 aa3.64□□□□□ -1.83
Vps54-201ENSMUST00000006221 Krtap19-4Q925H7 84 aa3.58□□□□□ -1.84
Vps54-201ENSMUST00000006221 A0A1Y7VJ07 166 aa3.58□□□□□ -1.84
Retrieved 100 of 22,080 RNA–protein pairs in 85.9 ms