RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W RSF1Q05043 376 aa2.06□□□□□ -2.08
HER1YOR227W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
HER1YOR227W APC5Q08683 685 aa2.06□□□□□ -2.08
HER1YOR227W GPB1Q08886 897 aa2.06□□□□□ -2.08
HER1YOR227W CHS5Q12114 671 aaKnown RBP2.06□□□□□ -2.08
HER1YOR227W YMR084WA2P2R3 262 aa2.05□□□□□ -2.08
HER1YOR227W PHO5P00635 467 aa2.05□□□□□ -2.08
HER1YOR227W TPK1P06244 397 aa2.05□□□□□ -2.08
HER1YOR227W YCK2P23292 546 aaKnown RBP2.05□□□□□ -2.08
HER1YOR227W CWH43P25618 953 aa2.05□□□□□ -2.08
HER1YOR227W PRO1P32264 428 aa2.05□□□□□ -2.08
HER1YOR227W EFT1P32324 842 aaKnown RBP2.05□□□□□ -2.08
HER1YOR227W THI2P38141 450 aa2.05□□□□□ -2.08
HER1YOR227W SMF1P38925 575 aa2.05□□□□□ -2.08
HER1YOR227W GID8P40208 455 aa2.05□□□□□ -2.08
HER1YOR227W OSW5P40219 148 aa2.05□□□□□ -2.08
HER1YOR227W MET18P40469 1032 aa2.05□□□□□ -2.08
HER1YOR227W RRT14P40470 206 aa2.05□□□□□ -2.08
HER1YOR227W YGR266WP53326 701 aa2.05□□□□□ -2.08
HER1YOR227W MYO5Q04439 1219 aaKnown RBP2.05□□□□□ -2.08
HER1YOR227W ARV1Q06541 321 aa2.05□□□□□ -2.08
HER1YOR227W CTI6Q08923 506 aa2.05□□□□□ -2.08
HER1YOR227W APL5Q08951 932 aaKnown RBP2.05□□□□□ -2.08
HER1YOR227W ACM1Q08981 209 aa2.05□□□□□ -2.08
HER1YOR227W YLL058WQ12198 575 aa2.05□□□□□ -2.08
HER1YOR227W STT4P37297 1900 aa2.05□□□□□ -2.08
HER1YOR227W TUB2P02557 457 aaKnown RBP2.05□□□□□ -2.08
HER1YOR227W NOT3P06102 836 aaKnown RBP2.05□□□□□ -2.08
HER1YOR227W AMS1P22855 1083 aa2.05□□□□□ -2.08
HER1YOR227W BCS1P32839 456 aa2.05□□□□□ -2.08
HER1YOR227W MET28P40573 187 aa2.05□□□□□ -2.08
HER1YOR227W AGX1P43567 385 aa2.05□□□□□ -2.08
HER1YOR227W AIP1P46680 615 aaKnown RBP2.05□□□□□ -2.08
HER1YOR227W ALY2P47029 1046 aa2.05□□□□□ -2.08
HER1YOR227W INN1P53901 409 aa2.05□□□□□ -2.08
HER1YOR227W REG1Q00816 1014 aa2.05□□□□□ -2.08
HER1YOR227W RBA50Q04418 439 aa2.05□□□□□ -2.08
HER1YOR227W ENT4Q07872 247 aa2.05□□□□□ -2.08
HER1YOR227W SUL2Q12325 893 aa2.05□□□□□ -2.08
HER1YOR227W OM45P16547 393 aa2.05□□□□□ -2.08
HER1YOR227W ADE2P21264 571 aaKnown RBP2.05□□□□□ -2.08
HER1YOR227W ARG1P22768 420 aa2.05□□□□□ -2.08
HER1YOR227W RIT1P23796 513 aa2.05□□□□□ -2.08
HER1YOR227W IMG2P25642 146 aaPredicted RBP2.05□□□□□ -2.08
HER1YOR227W ATG19P35193 415 aa2.05□□□□□ -2.08
HER1YOR227W RMA1P36001 430 aaKnown RBP2.05□□□□□ -2.08
HER1YOR227W STB6P36085 766 aa2.05□□□□□ -2.08
HER1YOR227W NPR3P38742 1146 aa2.05□□□□□ -2.08
HER1YOR227W MEF2P39677 819 aa2.05□□□□□ -2.08
HER1YOR227W BUD27P43573 796 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
HER1YOR227W YGR045CP53229 120 aa2.05□□□□□ -2.08
HER1YOR227W AIM32Q04689 311 aa2.05□□□□□ -2.08
HER1YOR227W RPN7Q06103 429 aaKnown RBP2.05□□□□□ -2.08
HER1YOR227W WHI4Q07655 649 aaKnown RBP2.05□□□□□ -2.08
HER1YOR227W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
HER1YOR227W YPL260WQ08977 551 aa2.05□□□□□ -2.08
HER1YOR227W MDM20Q12387 796 aaKnown RBP2.05□□□□□ -2.08
HER1YOR227W GCN4P03069 281 aa2.04□□□□□ -2.08
HER1YOR227W ARO3P14843 370 aaKnown RBP2.04□□□□□ -2.08
HER1YOR227W SPC110P32380 944 aa2.04□□□□□ -2.08
HER1YOR227W SUR1P33300 382 aa2.04□□□□□ -2.08
HER1YOR227W YSW1P38280 609 aa2.04□□□□□ -2.08
HER1YOR227W FTH1P38310 465 aa2.04□□□□□ -2.08
HER1YOR227W MIP6P38760 659 aaKnown RBP2.04□□□□□ -2.08
HER1YOR227W PSF2P40359 213 aa2.04□□□□□ -2.08
HER1YOR227W PRK1P40494 810 aa2.04□□□□□ -2.08
HER1YOR227W SGN1P40561 250 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
HER1YOR227W BSC5P53755 489 aa2.04□□□□□ -2.08
HER1YOR227W CSL4P53859 292 aaPredicted RBP2.04□□□□□ -2.08
HER1YOR227W GPD1Q00055 391 aaKnown RBP2.04□□□□□ -2.08
HER1YOR227W RPA49Q01080 415 aaPredicted RBP2.04□□□□□ -2.08
HER1YOR227W TOF2Q02208 771 aa2.04□□□□□ -2.08
HER1YOR227W NGL2Q03264 515 aaKnown RBP2.04□□□□□ -2.08
HER1YOR227W RSA3Q05942 220 aaKnown RBP2.04□□□□□ -2.08
HER1YOR227W AAD4Q07747 329 aa2.04□□□□□ -2.08
HER1YOR227W ALG6Q12001 544 aaKnown RBP2.04□□□□□ -2.08
HER1YOR227W RPP2BP02400 110 aaKnown RBP2.04□□□□□ -2.08
HER1YOR227W URA3P03962 267 aa2.04□□□□□ -2.08
HER1YOR227W AFT1P22149 690 aa2.04□□□□□ -2.08
HER1YOR227W CLB1P24868 471 aa2.04□□□□□ -2.08
HER1YOR227W ERV1P27882 189 aa2.04□□□□□ -2.08
HER1YOR227W NAM7P30771 971 aaKnown RBP2.04□□□□□ -2.08
HER1YOR227W RME1P32338 300 aaKnown RBP2.04□□□□□ -2.08
HER1YOR227W ARP2P32381 391 aaKnown RBP2.04□□□□□ -2.08
HER1YOR227W NIP100P33420 868 aa2.04□□□□□ -2.08
HER1YOR227W MRPL16P38064 232 aa2.04□□□□□ -2.08
HER1YOR227W FLR1P38124 548 aa2.04□□□□□ -2.08
HER1YOR227W YHR131CP38835 850 aa2.04□□□□□ -2.08
HER1YOR227W SAW1P39735 261 aa2.04□□□□□ -2.08
HER1YOR227W YGL242CP53066 181 aa2.04□□□□□ -2.08
HER1YOR227W YGL082WP53155 381 aa2.04□□□□□ -2.08
HER1YOR227W PEF1P53238 335 aa2.04□□□□□ -2.08
HER1YOR227W SEC5P89102 971 aa2.04□□□□□ -2.08
HER1YOR227W DON1Q05610 365 aa2.04□□□□□ -2.08
HER1YOR227W YPR172WQ06608 200 aa2.04□□□□□ -2.08
HER1YOR227W VAM6Q07468 1049 aa2.04□□□□□ -2.08
HER1YOR227W FMP45Q07651 309 aa2.04□□□□□ -2.08
HER1YOR227W GPM3Q12326 303 aa2.04□□□□□ -2.08
HER1YOR227W RPS17AP02407 136 aaKnown RBP2.04□□□□□ -2.08
HER1YOR227W RPS17BP14127 136 aaKnown RBP2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 60 ms