RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeast

Gene SSO2, Length 888 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSO2	YMR183C	YLR464W	P0CX17	216 aa		4.12	□□□□□ -1.75
SSO2	YMR183C	CDC26	P14724	124 aa		4.12	□□□□□ -1.75
SSO2	YMR183C	MDM10	P18409	493 aa		4.12	□□□□□ -1.75
SSO2	YMR183C	STE4	P18851	423 aa		4.12	□□□□□ -1.75
SSO2	YMR183C	MCM3	P24279	971 aa	Known RBP	4.12	□□□□□ -1.75
SSO2	YMR183C	DGR2	P32330	852 aa		4.12	□□□□□ -1.75
SSO2	YMR183C	DPH2	P32461	534 aa		4.12	□□□□□ -1.75
SSO2	YMR183C	LRP1	P38801	184 aa	Known RBP	4.12	□□□□□ -1.75
SSO2	YMR183C	POP2	P39008	433 aa		4.12	□□□□□ -1.75
SSO2	YMR183C	YEL076C	P39971	216 aa		4.12	□□□□□ -1.75
SSO2	YMR183C	THI6	P41835	540 aa		4.12	□□□□□ -1.75
SSO2	YMR183C	IRC5	P43610	853 aa		4.12	□□□□□ -1.75
SSO2	YMR183C	CTF18	P49956	741 aa		4.12	□□□□□ -1.75
SSO2	YMR183C	HOS2	P53096	452 aa	Predicted RBP	4.12	□□□□□ -1.75
SSO2	YMR183C	PRP3	Q03338	469 aa	Predicted RBP	4.12	□□□□□ -1.75
SSO2	YMR183C	YDR286C	Q05530	114 aa		4.12	□□□□□ -1.75
SSO2	YMR183C	ULA1	Q12059	462 aa		4.12	□□□□□ -1.75
SSO2	YMR183C	POL3	P15436	1097 aa		4.11	□□□□□ -1.75
SSO2	YMR183C	PDX1	P16451	410 aa		4.11	□□□□□ -1.75
SSO2	YMR183C	SGF29	P25554	259 aa		4.11	□□□□□ -1.75
SSO2	YMR183C	CNS1	P33313	385 aa		4.11	□□□□□ -1.75
SSO2	YMR183C	TEF4	P36008	412 aa	Known RBP	4.11	□□□□□ -1.75
SSO2	YMR183C	YBR225W	P38321	900 aa		4.11	□□□□□ -1.75
SSO2	YMR183C	CRG1	P38892	291 aa	RIP-Chip data	4.11	□□□□□ -1.75	not detected
SSO2	YMR183C	STT3	P39007	718 aa	Known RBP	4.11	□□□□□ -1.75
SSO2	YMR183C	FTR1	P40088	404 aa		4.11	□□□□□ -1.75
SSO2	YMR183C	ARF3	P40994	183 aa	RIP-Chip data	4.11	□□□□□ -1.75	not detected
SSO2	YMR183C	YPL071C	Q02864	156 aa		4.11	□□□□□ -1.75
SSO2	YMR183C	FMP30	Q02883	468 aa		4.11	□□□□□ -1.75
SSO2	YMR183C	SNO4	Q04902	237 aa		4.11	□□□□□ -1.75
SSO2	YMR183C	UTP21	Q06078	939 aa	Predicted RBP	4.11	□□□□□ -1.75
SSO2	YMR183C	HSP33	Q08914	237 aa	Known RBP	4.11	□□□□□ -1.75
SSO2	YMR183C	HSP32	Q08992	237 aa		4.11	□□□□□ -1.75
SSO2	YMR183C	SFI1	Q12369	946 aa		4.11	□□□□□ -1.75
SSO2	YMR183C	RVB2	Q12464	471 aa	Known RBP	4.11	□□□□□ -1.75
SSO2	YMR183C	TY1B-A	O13527	1196 aa	Known RBP	4.1	□□□□□ -1.75
SSO2	YMR183C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
SSO2	YMR183C	BET2	P20133	325 aa		4.1	□□□□□ -1.75
SSO2	YMR183C	CBF2	P32504	956 aa		4.1	□□□□□ -1.75
SSO2	YMR183C	NPL6	P32832	435 aa		4.1	□□□□□ -1.75
SSO2	YMR183C	CDS1	P38221	457 aa		4.1	□□□□□ -1.75
SSO2	YMR183C	YBR138C	P38277	524 aa		4.1	□□□□□ -1.75
SSO2	YMR183C	SSP120	P39931	234 aa	Known RBP	4.1	□□□□□ -1.75
SSO2	YMR183C	PRM2	P40534	656 aa		4.1	□□□□□ -1.75
SSO2	YMR183C	RMD8	P43620	662 aa		4.1	□□□□□ -1.75
SSO2	YMR183C	ENP2	P48234	707 aa	Known RBP	4.1	□□□□□ -1.75
SSO2	YMR183C	YGL117W	P53133	265 aa		4.1	□□□□□ -1.75
SSO2	YMR183C	CPR8	P53728	308 aa		4.1	□□□□□ -1.75
SSO2	YMR183C	YMR155W	Q03795	547 aa		4.1	□□□□□ -1.75
SSO2	YMR183C	YDR341C	Q05506	607 aa	Known RBP	4.1	□□□□□ -1.75
SSO2	YMR183C	TFC6	Q06339	672 aa		4.1	□□□□□ -1.75
SSO2	YMR183C	IWR1	Q07532	353 aa	Predicted RBP	4.1	□□□□□ -1.75
SSO2	YMR183C	AFT2	Q08957	416 aa		4.1	□□□□□ -1.75
SSO2	YMR183C	PGC1	Q08959	321 aa		4.1	□□□□□ -1.75
SSO2	YMR183C	CKA1	P15790	372 aa		4.09	□□□□□ -1.75
SSO2	YMR183C	TUP1	P16649	713 aa		4.09	□□□□□ -1.75
SSO2	YMR183C	OLE1	P21147	510 aa	Known RBP	4.09	□□□□□ -1.75
SSO2	YMR183C	SIR1	P21691	654 aa		4.09	□□□□□ -1.75
SSO2	YMR183C	MF(ALPHA)2	P32435	120 aa		4.09	□□□□□ -1.75
SSO2	YMR183C	MRPL7	P36519	292 aa		4.09	□□□□□ -1.75
SSO2	YMR183C	NPR3	P38742	1146 aa		4.09	□□□□□ -1.75
SSO2	YMR183C	PIH1	P38768	344 aa		4.09	□□□□□ -1.75
SSO2	YMR183C	YEL025C	P39991	1188 aa		4.09	□□□□□ -1.75
SSO2	YMR183C	UBP7	P40453	1071 aa		4.09	□□□□□ -1.75
SSO2	YMR183C	YGR054W	P53235	642 aa	Known RBP	4.09	□□□□□ -1.75
SSO2	YMR183C	ARE2	P53629	642 aa	Known RBP	4.09	□□□□□ -1.75
SSO2	YMR183C	YNR061C	P53747	219 aa		4.09	□□□□□ -1.75
SSO2	YMR183C	BSC5	P53755	489 aa		4.09	□□□□□ -1.75
SSO2	YMR183C	EFR3	Q03653	782 aa	Known RBP	4.09	□□□□□ -1.75
SSO2	YMR183C	TRS23	Q03784	219 aa		4.09	□□□□□ -1.75
SSO2	YMR183C	SEG1	Q04279	960 aa		4.09	□□□□□ -1.75
SSO2	YMR183C	VTI1	Q04338	217 aa		4.09	□□□□□ -1.75
SSO2	YMR183C	ARG7	Q04728	441 aa		4.09	□□□□□ -1.75
SSO2	YMR183C	YAP7	Q08182	245 aa		4.09	□□□□□ -1.75
SSO2	YMR183C	RTK1	Q12100	620 aa	Predicted RBP	4.09	□□□□□ -1.75
SSO2	YMR183C	DBP10	Q12389	995 aa	Known RBP	4.09	□□□□□ -1.75
SSO2	YMR183C	ISA2	Q12425	185 aa		4.09	□□□□□ -1.75
SSO2	YMR183C	SKM1	Q12469	655 aa		4.09	□□□□□ -1.75
SSO2	YMR183C	GCN4	P03069	281 aa		4.08	□□□□□ -1.76
SSO2	YMR183C	ARG3	P05150	338 aa		4.08	□□□□□ -1.76
SSO2	YMR183C	MET17	P06106	444 aa		4.08	□□□□□ -1.76
SSO2	YMR183C	PMS1	P14242	873 aa		4.08	□□□□□ -1.76
SSO2	YMR183C	SWI4	P25302	1093 aa	Known RBP	4.08	□□□□□ -1.76
SSO2	YMR183C	SAC6	P32599	642 aa	Known RBP	4.08	□□□□□ -1.76
SSO2	YMR183C	YLF2	P38746	405 aa		4.08	□□□□□ -1.76
SSO2	YMR183C	LSM5	P40089	93 aa	Known RBP	4.08	□□□□□ -1.76
SSO2	YMR183C	YGR250C	P53316	781 aa	Known RBP	4.08	□□□□□ -1.76
SSO2	YMR183C	RPT6	Q01939	405 aa	Known RBP	4.08	□□□□□ -1.76
SSO2	YMR183C	MFM1	Q02783	413 aa		4.08	□□□□□ -1.76
SSO2	YMR183C	RMT2	Q03305	412 aa		4.08	□□□□□ -1.76
SSO2	YMR183C	YPL191C	Q08930	360 aa		4.08	□□□□□ -1.76
SSO2	YMR183C	AIM41	Q12032	185 aa		4.08	□□□□□ -1.76
SSO2	YMR183C	HSP42	Q12329	375 aa		4.08	□□□□□ -1.76
SSO2	YMR183C	PGA3	Q12746	312 aa	Known RBP	4.08	□□□□□ -1.76
SSO2	YMR183C	ERG11	P10614	530 aa		4.07	□□□□□ -1.76
SSO2	YMR183C	PCK1	P10963	549 aa		4.07	□□□□□ -1.76
SSO2	YMR183C	RIT1	P23796	513 aa		4.07	□□□□□ -1.76
SSO2	YMR183C	ERG3	P32353	365 aa		4.07	□□□□□ -1.76
SSO2	YMR183C	MTC7	P32633	139 aa		4.07	□□□□□ -1.76
SSO2	YMR183C	YHR033W	P38690	423 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms