RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	MMF1	P40185	145 aa	Known RBP	4.63	□□□□□ -1.67
UBC8	YEL012W	PGA2	P53903	129 aa		4.63	□□□□□ -1.67
UBC8	YEL012W	YNL146W	P53906	100 aa		4.63	□□□□□ -1.67
UBC8	YEL012W	ERG5	P54781	538 aa		4.63	□□□□□ -1.67
UBC8	YEL012W	PEX19	Q07418	342 aa		4.63	□□□□□ -1.67
UBC8	YEL012W	RPS14A	P06367	137 aa	Known RBP	4.62	□□□□□ -1.67
UBC8	YEL012W	MAS1	P10507	462 aa		4.62	□□□□□ -1.67
UBC8	YEL012W	RPL4A	P10664	362 aa	Known RBP	4.62	□□□□□ -1.67
UBC8	YEL012W	ATP12	P22135	325 aa		4.62	□□□□□ -1.67
UBC8	YEL012W	GAS1	P22146	559 aa	Known RBP	4.62	□□□□□ -1.67
UBC8	YEL012W	LST4	P34239	828 aa		4.62	□□□□□ -1.67
UBC8	YEL012W	VID24	P38263	362 aa		4.62	□□□□□ -1.67
UBC8	YEL012W	RPS14B	P39516	138 aa	Known RBP	4.62	□□□□□ -1.67
UBC8	YEL012W	RPL4B	P49626	362 aa	Known RBP	4.62	□□□□□ -1.67
UBC8	YEL012W	EXG2	P52911	562 aa		4.62	□□□□□ -1.67
UBC8	YEL012W	RIM8	P53179	542 aa		4.62	□□□□□ -1.67
UBC8	YEL012W	ARK1	P53974	638 aa		4.62	□□□□□ -1.67
UBC8	YEL012W	RCR2	Q03446	210 aa	Known RBP	4.62	□□□□□ -1.67
UBC8	YEL012W	IES4	Q08561	116 aa		4.62	□□□□□ -1.67
UBC8	YEL012W	SWM1	Q12379	170 aa		4.62	□□□□□ -1.67
UBC8	YEL012W	SST2	P11972	698 aa	Known RBP	4.61	□□□□□ -1.67
UBC8	YEL012W	CDC26	P14724	124 aa		4.61	□□□□□ -1.67
UBC8	YEL012W	PEX34	P25584	144 aa		4.61	□□□□□ -1.67
UBC8	YEL012W	BMH2	P34730	273 aa	Known RBP	4.61	□□□□□ -1.67
UBC8	YEL012W	PIH1	P38768	344 aa		4.61	□□□□□ -1.67
UBC8	YEL012W	YER186C	P40101	306 aa		4.61	□□□□□ -1.67
UBC8	YEL012W	SET2	P46995	733 aa	Known RBP	4.61	□□□□□ -1.67
UBC8	YEL012W	TAM41	P53230	385 aa		4.61	□□□□□ -1.67
UBC8	YEL012W	RTT102	P53330	157 aa		4.61	□□□□□ -1.67
UBC8	YEL012W	RET3	P53600	189 aa		4.61	□□□□□ -1.67
UBC8	YEL012W	ARG5,6	Q01217	863 aa		4.61	□□□□□ -1.67
UBC8	YEL012W	HMO1	Q03973	246 aa	Known RBP	4.61	□□□□□ -1.67
UBC8	YEL012W	CSM3	Q04659	317 aa		4.61	□□□□□ -1.67
UBC8	YEL012W	MFB1	Q04922	465 aa		4.61	□□□□□ -1.67
UBC8	YEL012W	YLR407W	Q06070	228 aa		4.61	□□□□□ -1.67
UBC8	YEL012W	YLH47	Q06493	454 aa		4.61	□□□□□ -1.67
UBC8	YEL012W	YPR027C	Q12079	277 aa		4.61	□□□□□ -1.67
UBC8	YEL012W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
UBC8	YEL012W	MEX67	Q99257	599 aa	Known RBP	4.61	□□□□□ -1.67
UBC8	YEL012W	ATP4	P05626	244 aa		4.6	□□□□□ -1.67
UBC8	YEL012W	TPM1	P17536	199 aa	Known RBP	4.6	□□□□□ -1.67
UBC8	YEL012W	COX11	P19516	300 aa	Known RBP	4.6	□□□□□ -1.67
UBC8	YEL012W	PRP6	P19735	899 aa	Predicted RBP	4.6	□□□□□ -1.67
UBC8	YEL012W	PGS1	P25578	521 aa		4.6	□□□□□ -1.67
UBC8	YEL012W	HIR1	P32479	840 aa		4.6	□□□□□ -1.67
UBC8	YEL012W	ECM32	P32644	1121 aa	Known RBP	4.6	□□□□□ -1.67
UBC8	YEL012W	YPT7	P32939	208 aa		4.6	□□□□□ -1.67
UBC8	YEL012W	THI80	P35202	319 aa		4.6	□□□□□ -1.67
UBC8	YEL012W	CTF13	P35203	478 aa		4.6	□□□□□ -1.67
UBC8	YEL012W	YHR112C	P38716	378 aa		4.6	□□□□□ -1.67
UBC8	YEL012W	MED6	P38782	295 aa		4.6	□□□□□ -1.67
UBC8	YEL012W	STT3	P39007	718 aa	Known RBP	4.6	□□□□□ -1.67
UBC8	YEL012W	PRP31	P49704	494 aa	Predicted RBP	4.6	□□□□□ -1.67
UBC8	YEL012W	SPC98	P53540	846 aa		4.6	□□□□□ -1.67
UBC8	YEL012W	NCS2	P53923	493 aa	Predicted RBP	4.6	□□□□□ -1.67
UBC8	YEL012W	NOP15	P53927	220 aa	Predicted RBP	4.6	□□□□□ -1.67
UBC8	YEL012W	SLG1	P54867	378 aa		4.6	□□□□□ -1.67
UBC8	YEL012W	ECM38	Q05902	660 aa	Predicted RBP	4.6	□□□□□ -1.67
UBC8	YEL012W	ADY4	Q05955	493 aa		4.6	□□□□□ -1.67
UBC8	YEL012W	YPS7	Q06325	596 aa		4.6	□□□□□ -1.67
UBC8	YEL012W	SLK19	Q08581	821 aa	Known RBP	4.6	□□□□□ -1.67
UBC8	YEL012W	MSB2	P32334	1306 aa		4.6	□□□□□ -1.67
UBC8	YEL012W	TUF1	P02992	437 aa	Known RBP	4.59	□□□□□ -1.67
UBC8	YEL012W	HAP2	P06774	265 aa		4.59	□□□□□ -1.67
UBC8	YEL012W	HMG2	P12684	1045 aa		4.59	□□□□□ -1.67
UBC8	YEL012W	THR4	P16120	514 aa	Known RBP	4.59	□□□□□ -1.67
UBC8	YEL012W	IME1	P21190	360 aa		4.59	□□□□□ -1.67
UBC8	YEL012W	SIR1	P21691	654 aa		4.59	□□□□□ -1.67
UBC8	YEL012W	PRR1	P28708	518 aa		4.59	□□□□□ -1.67
UBC8	YEL012W	DPH2	P32461	534 aa		4.59	□□□□□ -1.67
UBC8	YEL012W	HMT1	P38074	348 aa		4.59	□□□□□ -1.67
UBC8	YEL012W	SIF2	P38262	535 aa		4.59	□□□□□ -1.67
UBC8	YEL012W	ECM1	P39715	212 aa		4.59	□□□□□ -1.67
UBC8	YEL012W	IES1	P43579	692 aa		4.59	□□□□□ -1.67
UBC8	YEL012W	CUL3	P53202	744 aa		4.59	□□□□□ -1.67
UBC8	YEL012W	CAF130	P53280	1122 aa	Predicted RBP	4.59	□□□□□ -1.67
UBC8	YEL012W	YNR061C	P53747	219 aa		4.59	□□□□□ -1.67
UBC8	YEL012W	TEX1	P53851	422 aa	Known RBP	4.59	□□□□□ -1.67
UBC8	YEL012W	ARP5	P53946	755 aa		4.59	□□□□□ -1.67
UBC8	YEL012W	ALG11	P53954	548 aa	Known RBP	4.59	□□□□□ -1.67
UBC8	YEL012W	GPD1	Q00055	391 aa	Known RBP	4.59	□□□□□ -1.67
UBC8	YEL012W	MET14	Q02196	202 aa		4.59	□□□□□ -1.67
UBC8	YEL012W	TRS130	Q03660	1102 aa		4.59	□□□□□ -1.67
UBC8	YEL012W	SNU56	Q03782	492 aa	Known RBP	4.59	□□□□□ -1.67
UBC8	YEL012W	YML053C	Q04978	212 aa		4.59	□□□□□ -1.67
UBC8	YEL012W	TMA10	Q06177	86 aa		4.59	□□□□□ -1.67
UBC8	YEL012W	SHS1	Q07657	551 aa		4.59	□□□□□ -1.67
UBC8	YEL012W	DNL4	Q08387	944 aa	Predicted RBP	4.59	□□□□□ -1.67
UBC8	YEL012W	TGL5	Q12043	749 aa		4.59	□□□□□ -1.67
UBC8	YEL012W	PRP8	P33334	2413 aa	Known RBP	4.58	□□□□□ -1.68
UBC8	YEL012W	RPS17A	P02407	136 aa	Known RBP	4.58	□□□□□ -1.68
UBC8	YEL012W	MATALPHA2	P0CY08	210 aa		4.58	□□□□□ -1.68
UBC8	YEL012W	HMLALPHA2	P0CY09	210 aa		4.58	□□□□□ -1.68
UBC8	YEL012W	PYC1	P11154	1178 aa	Known RBP	4.58	□□□□□ -1.68
UBC8	YEL012W	KAR1	P11927	433 aa		4.58	□□□□□ -1.68
UBC8	YEL012W	TCP1	P12612	559 aa	Known RBP	4.58	□□□□□ -1.68
UBC8	YEL012W	GLN4	P13188	809 aa	Known RBP	4.58	□□□□□ -1.68
UBC8	YEL012W	RPS17B	P14127	136 aa	Known RBP	4.58	□□□□□ -1.68
UBC8	YEL012W	MCM3	P24279	971 aa	Known RBP	4.58	□□□□□ -1.68
UBC8	YEL012W	ERG6	P25087	383 aa	Known RBP	4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 32 ms