RNA–Protein interactions for RNA: YDR456W

NHX1, Transcript of Na+/H+ and K+/H+ exchanger, yeast

Gene NHX1, Length 1,902 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NHX1	YDR456W	ILS1	P09436	1072 aa	Known RBP	4.22	□□□□□ -1.73
NHX1	YDR456W	YER152C	P10356	443 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	YAK1	P14680	807 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	NMT1	P14743	455 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	VMA2	P16140	517 aa	Known RBP	4.22	□□□□□ -1.73
NHX1	YDR456W	FAR1	P21268	830 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	RET1	P22276	1149 aa	Known RBP	4.22	□□□□□ -1.73
NHX1	YDR456W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
NHX1	YDR456W	CUE2	P36075	443 aa	Known RBP	4.22	□□□□□ -1.73
NHX1	YDR456W	HIS2	P38635	335 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	HXT6	P39003	570 aa	Known RBP	4.22	□□□□□ -1.73
NHX1	YDR456W	HXT7	P39004	570 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	FCY21	P40039	528 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	LCP5	P40079	357 aa	Predicted RBP	4.22	□□□□□ -1.73
NHX1	YDR456W	MMM1	P41800	426 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	ROG3	P43602	733 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	RET2	P43621	546 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	TOS3	P43637	560 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	YGR153W	P48238	217 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	RFX1	P48743	811 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	TEL2	P53038	688 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	TAD1	P53065	400 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	AIM14	P53109	570 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	UTP22	P53254	1237 aa	Predicted RBP	4.22	□□□□□ -1.73
NHX1	YDR456W	TIM10	P87108	93 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	FMP30	Q02883	468 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	ERO1	Q03103	563 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	ACL4	Q03771	387 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	SPC19	Q03954	165 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	FMP42	Q04991	504 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	ATG33	Q06485	197 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	SIL1	Q08199	421 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	UIP4	Q08926	304 aa		4.22	□□□□□ -1.73
NHX1	YDR456W	TUF1	P02992	437 aa	Known RBP	4.21	□□□□□ -1.74
NHX1	YDR456W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
NHX1	YDR456W	ERG11	P10614	530 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	PFK1	P16861	987 aa	Known RBP	4.21	□□□□□ -1.74
NHX1	YDR456W	COQ1	P18900	473 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	FRD1	P32614	470 aa	Known RBP	4.21	□□□□□ -1.74
NHX1	YDR456W	RPT5	P33297	434 aa	Known RBP	4.21	□□□□□ -1.74
NHX1	YDR456W	SHM2	P37291	469 aa	Known RBP	4.21	□□□□□ -1.74
NHX1	YDR456W	YRO2	P38079	344 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	VHC1	P38329	1120 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	YBR242W	P38331	238 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	RRF1	P38771	230 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	DPH1	P40487	425 aa	Known RBP	4.21	□□□□□ -1.74
NHX1	YDR456W	CCT7	P42943	550 aa	Known RBP	4.21	□□□□□ -1.74
NHX1	YDR456W	BRE2	P43132	505 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	CAF16	P43569	289 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	GYP8	P43570	497 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	IML2	P47031	731 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	TRF5	P48561	642 aa	Known RBP	4.21	□□□□□ -1.74
NHX1	YDR456W	ASE1	P50275	885 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	MSN5	P52918	1224 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	RIM8	P53179	542 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	BNI5	P53890	448 aa	Known RBP	4.21	□□□□□ -1.74
NHX1	YDR456W	ORC3	P54790	616 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	RSM24	Q03976	319 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	YMR111C	Q04461	462 aa	Predicted RBP	4.21	□□□□□ -1.74
NHX1	YDR456W	FUS2	Q05670	677 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	ATG26	Q06321	1198 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	PSF3	Q12146	194 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	HSP42	Q12329	375 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	RKM4	Q12504	494 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	YML002W	P0CF17	737 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	HMG1	P12683	1054 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	COX11	P19516	300 aa	Known RBP	4.21	□□□□□ -1.74
NHX1	YDR456W	SRO9	P25567	434 aa	Known RBP	4.21	□□□□□ -1.74
NHX1	YDR456W	DBF4	P32325	704 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	TFC1	P32367	649 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	HIR2	P32480	875 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	PEX5	P35056	612 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	TPO5	P36029	618 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	MCD4	P36051	919 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	EXO5	P38289	585 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	UTP9	P38882	575 aa	Known RBP	4.21	□□□□□ -1.74
NHX1	YDR456W	DUN1	P39009	513 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	PIK1	P39104	1066 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	PRK1	P40494	810 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	SER33	P40510	469 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	IRC5	P43610	853 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	IRC6	P43615	237 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	CNN1	P43618	361 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	NUP84	P52891	726 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	RCF2	P53721	224 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	ARC35	P53731	342 aa	Known RBP	4.21	□□□□□ -1.74
NHX1	YDR456W	IMP4	P53941	290 aa	Known RBP	4.21	□□□□□ -1.74
NHX1	YDR456W	YDR239C	Q03780	787 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	SPO71	Q03868	1245 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	PPM1	Q04081	328 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	SSQ1	Q05931	657 aa	Predicted RBP	4.21	□□□□□ -1.74
NHX1	YDR456W	SNX3	Q08826	162 aa	Known RBP	4.21	□□□□□ -1.74
NHX1	YDR456W	SPE4	Q12455	300 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	ADF1	Q2V2Q1	113 aa		4.21	□□□□□ -1.74
NHX1	YDR456W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
NHX1	YDR456W	UBA1	P22515	1024 aa	Known RBP	4.2	□□□□□ -1.74
NHX1	YDR456W	HSP30	P25619	332 aa		4.2	□□□□□ -1.74
NHX1	YDR456W	PRP45	P28004	379 aa	Predicted RBP	4.2	□□□□□ -1.74
NHX1	YDR456W	YKL107W	P34251	309 aa		4.2	□□□□□ -1.74
NHX1	YDR456W	MYO3	P36006	1272 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms