RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	CIR1	P42940	261 aa		5.15	□□□□□ -1.59
NSE3	YDR288W	TAX4	P47030	604 aa		5.15	□□□□□ -1.59
NSE3	YDR288W	COG1	P53079	417 aa		5.15	□□□□□ -1.59
NSE3	YDR288W	YGR079W	P53249	370 aa		5.15	□□□□□ -1.59
NSE3	YDR288W	SUB1	P54000	292 aa	Known RBP	5.15	□□□□□ -1.59
NSE3	YDR288W	YOR389W	Q08912	624 aa		5.15	□□□□□ -1.59
NSE3	YDR288W	YPL191C	Q08930	360 aa		5.15	□□□□□ -1.59
NSE3	YDR288W	COX1	P00401	534 aa		5.14	□□□□□ -1.59
NSE3	YDR288W	ILV2	P07342	687 aa	Known RBP	5.14	□□□□□ -1.59
NSE3	YDR288W	HOM2	P13663	365 aa	Known RBP	5.14	□□□□□ -1.59
NSE3	YDR288W	SPO16	P17122	198 aa		5.14	□□□□□ -1.59
NSE3	YDR288W	RRP43	P25359	394 aa	Predicted RBP	5.14	□□□□□ -1.59
NSE3	YDR288W	RER1	P25560	188 aa		5.14	□□□□□ -1.59
NSE3	YDR288W	APD1	P38281	316 aa		5.14	□□□□□ -1.59
NSE3	YDR288W	VPS8	P39702	1274 aa		5.14	□□□□□ -1.59
NSE3	YDR288W	IST3	P40565	148 aa	Predicted RBP	5.14	□□□□□ -1.59
NSE3	YDR288W	NPA3	P47122	385 aa		5.14	□□□□□ -1.59
NSE3	YDR288W	CTF18	P49956	741 aa		5.14	□□□□□ -1.59
NSE3	YDR288W	IMO32	P53219	342 aa		5.14	□□□□□ -1.59
NSE3	YDR288W	STP3	Q05937	343 aa		5.14	□□□□□ -1.59
NSE3	YDR288W	MRI1	Q06489	411 aa	Known RBP	5.14	□□□□□ -1.59
NSE3	YDR288W	SWT1	Q12104	458 aa		5.14	□□□□□ -1.59
NSE3	YDR288W	SNF1	P06782	633 aa	Known RBP	5.13	□□□□□ -1.59
NSE3	YDR288W	VBA2	P38358	474 aa	Known RBP	5.13	□□□□□ -1.59
NSE3	YDR288W	YDR109C	Q04585	715 aa		5.13	□□□□□ -1.59
NSE3	YDR288W	GTB1	Q04924	702 aa		5.13	□□□□□ -1.59
NSE3	YDR288W	HRD3	Q05787	833 aa		5.13	□□□□□ -1.59
NSE3	YDR288W	ORM2	Q06144	216 aa		5.13	□□□□□ -1.59
NSE3	YDR288W	ATG23	Q06671	453 aa		5.13	□□□□□ -1.59
NSE3	YDR288W	VAM6	Q07468	1049 aa		5.13	□□□□□ -1.59
NSE3	YDR288W	CYK3	Q07533	885 aa		5.13	□□□□□ -1.59
NSE3	YDR288W	SSP2	Q08646	371 aa		5.13	□□□□□ -1.59
NSE3	YDR288W	YLR302C	O13544	120 aa		5.12	□□□□□ -1.59
NSE3	YDR288W	ERG11	P10614	530 aa		5.12	□□□□□ -1.59
NSE3	YDR288W	LAC1	P28496	418 aa		5.12	□□□□□ -1.59
NSE3	YDR288W	RRN3	P36070	627 aa		5.12	□□□□□ -1.59
NSE3	YDR288W	CUE2	P36075	443 aa	Known RBP	5.12	□□□□□ -1.59
NSE3	YDR288W	HOT13	P36078	116 aa		5.12	□□□□□ -1.59
NSE3	YDR288W	FLO10	P36170	1169 aa		5.12	□□□□□ -1.59
NSE3	YDR288W	ERC1	P38767	581 aa		5.12	□□□□□ -1.59
NSE3	YDR288W	RIC1	P40395	1056 aa		5.12	□□□□□ -1.59
NSE3	YDR288W	ASE1	P50275	885 aa		5.12	□□□□□ -1.59
NSE3	YDR288W	VID22	Q05934	901 aa		5.12	□□□□□ -1.59
NSE3	YDR288W	ERG27	Q12452	347 aa	Known RBP	5.12	□□□□□ -1.59
NSE3	YDR288W	PCD1	Q12524	340 aa		5.12	□□□□□ -1.59
NSE3	YDR288W	TY2A-LR1	P0C2J4	438 aa		5.11	□□□□□ -1.59
NSE3	YDR288W	TY2A-F	P0CX61	438 aa		5.11	□□□□□ -1.59
NSE3	YDR288W	TY2A-GR2	P0CX62	438 aa		5.11	□□□□□ -1.59
NSE3	YDR288W	TY2A-C	P25383	438 aa		5.11	□□□□□ -1.59
NSE3	YDR288W	YJU2	P28320	278 aa	Predicted RBP	5.11	□□□□□ -1.59
NSE3	YDR288W	ORC2	P32833	620 aa		5.11	□□□□□ -1.59
NSE3	YDR288W	DJP1	P40564	432 aa		5.11	□□□□□ -1.59
NSE3	YDR288W	YAT1	P80235	687 aa		5.11	□□□□□ -1.59
NSE3	YDR288W	YPL071C	Q02864	156 aa		5.11	□□□□□ -1.59
NSE3	YDR288W	TY2A-DR2	Q03483	438 aa		5.11	□□□□□ -1.59
NSE3	YDR288W	TMA16	Q08687	178 aa		5.11	□□□□□ -1.59
NSE3	YDR288W	TRM8	Q12009	286 aa		5.11	□□□□□ -1.59
NSE3	YDR288W	TY2A-B	Q12260	438 aa		5.11	□□□□□ -1.59
NSE3	YDR288W	TY2A-OR2	Q12293	438 aa		5.11	□□□□□ -1.59
NSE3	YDR288W	RDL1	Q12305	139 aa	Known RBP	5.11	□□□□□ -1.59
NSE3	YDR288W	TY2A-DR1	Q12392	438 aa		5.11	□□□□□ -1.59
NSE3	YDR288W	TY2A-OR1	Q12439	438 aa		5.11	□□□□□ -1.59
NSE3	YDR288W	TY2A-DR3	Q99303	438 aa		5.11	□□□□□ -1.59
NSE3	YDR288W	TAD3	Q9URQ3	322 aa		5.11	□□□□□ -1.59
NSE3	YDR288W	RTC1	Q08281	1341 aa		5.11	□□□□□ -1.59
NSE3	YDR288W	LRE1	P25579	583 aa	Known RBP	5.1	□□□□□ -1.59
NSE3	YDR288W	RFA2	P26754	273 aa	Known RBP	5.1	□□□□□ -1.59
NSE3	YDR288W	PSP1	P50896	841 aa	Known RBP	5.1	□□□□□ -1.59
NSE3	YDR288W	ATP23	P53722	227 aa		5.1	□□□□□ -1.59
NSE3	YDR288W	CSL4	P53859	292 aa	Predicted RBP	5.1	□□□□□ -1.59
NSE3	YDR288W	IRC3	Q06683	689 aa		5.1	□□□□□ -1.59
NSE3	YDR288W	OSW1	Q08692	278 aa		5.1	□□□□□ -1.59
NSE3	YDR288W	SES1	P07284	462 aa	Known RBP	5.09	□□□□□ -1.59
NSE3	YDR288W	PTC6	P25646	442 aa		5.09	□□□□□ -1.59
NSE3	YDR288W	GSY2	P27472	705 aa		5.09	□□□□□ -1.59
NSE3	YDR288W	HES1	P35843	434 aa		5.09	□□□□□ -1.59
NSE3	YDR288W	KES1	P35844	434 aa	Known RBP	5.09	□□□□□ -1.59
NSE3	YDR288W	BUD16	P39988	312 aa		5.09	□□□□□ -1.59
NSE3	YDR288W	VID27	P40157	782 aa		5.09	□□□□□ -1.59
NSE3	YDR288W	SAE2	P46946	345 aa		5.09	□□□□□ -1.59
NSE3	YDR288W	BNA1	P47096	177 aa		5.09	□□□□□ -1.59
NSE3	YDR288W	RRT6	P53117	311 aa	Predicted RBP	5.09	□□□□□ -1.59
NSE3	YDR288W	LGE1	Q02796	332 aa	Known RBP	5.09	□□□□□ -1.59
NSE3	YDR288W	OPY2	Q06810	360 aa		5.09	□□□□□ -1.59
NSE3	YDR288W	NEW1	Q08972	1196 aa	Known RBP	5.09	□□□□□ -1.59
NSE3	YDR288W	Q0010	Q9ZZX9	128 aa		5.09	□□□□□ -1.59
NSE3	YDR288W	GUK1	P15454	187 aa	Known RBP	5.08	□□□□□ -1.6
NSE3	YDR288W	NUP1	P20676	1076 aa		5.08	□□□□□ -1.6
NSE3	YDR288W	YER010C	P40011	234 aa		5.08	□□□□□ -1.6
NSE3	YDR288W	ATF1	P40353	525 aa		5.08	□□□□□ -1.6
NSE3	YDR288W	CBK1	P53894	756 aa		5.08	□□□□□ -1.6
NSE3	YDR288W	REG1	Q00816	1014 aa		5.08	□□□□□ -1.6
NSE3	YDR288W	NUS1	Q12063	375 aa		5.08	□□□□□ -1.6
NSE3	YDR288W	BAG7	Q12128	409 aa		5.08	□□□□□ -1.6
NSE3	YDR288W	NBP2	Q12163	236 aa		5.08	□□□□□ -1.6
NSE3	YDR288W	PRS5	Q12265	496 aa	Known RBP	5.08	□□□□□ -1.6
NSE3	YDR288W	NDJ1	Q12366	352 aa		5.08	□□□□□ -1.6
NSE3	YDR288W	SUI3	P09064	285 aa	Known RBP	5.07	□□□□□ -1.6
NSE3	YDR288W	YML003W	P0CF16	290 aa		5.07	□□□□□ -1.6
NSE3	YDR288W	CDC15	P27636	974 aa		5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 44.7 ms