RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOK1	YDR006C	HRK1	Q08732	759 aa	Known RBP	3	□□□□□ -1.93
SOK1	YDR006C	CTI6	Q08923	506 aa		3	□□□□□ -1.93
SOK1	YDR006C	VPS54	Q12071	889 aa		3	□□□□□ -1.93
SOK1	YDR006C	SUL2	Q12325	893 aa		3	□□□□□ -1.93
SOK1	YDR006C	LPX1	Q12405	387 aa	Known RBP	3	□□□□□ -1.93
SOK1	YDR006C	TUB2	P02557	457 aa	Known RBP	2.99	□□□□□ -1.93
SOK1	YDR006C	VPS33	P20795	691 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	APA2	P22108	325 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	MGM1	P32266	881 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	STB6	P36085	766 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	ATG14	P38270	344 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	EHT1	P38295	451 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	SRP68	P38687	599 aa	Known RBP	2.99	□□□□□ -1.93
SOK1	YDR006C	SMC2	P38989	1170 aa	Known RBP	2.99	□□□□□ -1.93
SOK1	YDR006C	VID28	P40547	921 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	YIR014W	P40570	242 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	ACS1	Q01574	713 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	PLB2	Q03674	706 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	CRR1	Q05790	422 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	YLR407W	Q06070	228 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	IWR1	Q07532	353 aa	Predicted RBP	2.99	□□□□□ -1.93
SOK1	YDR006C	THI72	Q08579	599 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	not detected
SOK1	YDR006C	YLL054C	Q12244	843 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	PRP6	P19735	899 aa	Predicted RBP	2.99	□□□□□ -1.93
SOK1	YDR006C	CLB1	P24868	471 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	SPB1	P25582	841 aa	Predicted RBP	2.99	□□□□□ -1.93
SOK1	YDR006C	PAP1	P29468	568 aa	Known RBP	2.99	□□□□□ -1.93
SOK1	YDR006C	NGG1	P32494	702 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	STE14	P32584	239 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	MUP3	P38734	546 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	ICP55	P40051	511 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	MMM1	P41800	426 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	LSB3	P43603	459 aa	Known RBP	2.99	□□□□□ -1.93
SOK1	YDR006C	ROK1	P45818	564 aa	Predicted RBP	2.99	□□□□□ -1.93
SOK1	YDR006C	ARI1	P53111	347 aa	Known RBP	2.99	□□□□□ -1.93
SOK1	YDR006C	YBP2	P53169	641 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	RCM1	P53972	490 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	ENT4	Q07872	247 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	VCX1	Q99385	411 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	CLC1	P17891	233 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	VPS17	P32913	551 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	TGL1	P34163	548 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	FLR1	P38124	548 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	CBR1	P38626	284 aa	Known RBP	2.99	□□□□□ -1.93
SOK1	YDR006C	CDC40	P40968	455 aa	Predicted RBP	2.99	□□□□□ -1.93
SOK1	YDR006C	BNA2	P47125	453 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	YGL242C	P53066	181 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	RMT2	Q03305	412 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	VBA4	Q04602	768 aa	Known RBP	2.99	□□□□□ -1.93
SOK1	YDR006C	AIM32	Q04689	311 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	ETT1	Q08421	412 aa	Known RBP	2.99	□□□□□ -1.93
SOK1	YDR006C	Q0010	Q9ZZX9	128 aa		2.99	□□□□□ -1.93
SOK1	YDR006C	STE3	P06783	470 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	CDC6	P09119	513 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	DMC1	P25453	334 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	BUD14	P27637	709 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	SEC65	P29478	273 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	RGI2	P40188	164 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	IAH1	P41734	238 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	TAM41	P53230	385 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	COQ6	P53318	479 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	CSL4	P53859	292 aa	Predicted RBP	2.98	□□□□□ -1.93
SOK1	YDR006C	RRN5	Q02983	363 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	RIM13	Q03792	727 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	MGR3	Q04472	501 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	ECM7	Q06200	448 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	VAM6	Q07468	1049 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	RTT109	Q07794	436 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	IKI3	Q06706	1349 aa	Known RBP	2.98	□□□□□ -1.93
SOK1	YDR006C	YEL076C-A	P0CX16	216 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	YLR464W	P0CX17	216 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	RAP1	P11938	827 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	POL3	P15436	1097 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	PHO81	P17442	1178 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	ARG1	P22768	420 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	MCX1	P38323	520 aa	Predicted RBP	2.98	□□□□□ -1.93
SOK1	YDR006C	PEX18	P38855	283 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	YEL076C	P39971	216 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	LRO1	P40345	661 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	ALG5	P40350	334 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	UTP18	P40362	594 aa	Predicted RBP	2.98	□□□□□ -1.93
SOK1	YDR006C	MET12	P46151	657 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	GCV2	P49095	1034 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	VID30	P53076	958 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	DUS1	P53759	423 aa	Known RBP	2.98	□□□□□ -1.93
SOK1	YDR006C	DAK1	P54838	584 aa	Known RBP	2.98	□□□□□ -1.93
SOK1	YDR006C	MUB1	Q03162	620 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	PPN1	Q04119	674 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	SIZ1	Q04195	904 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	ROY1	Q04847	553 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	ATG38	Q05789	226 aa	Known RBP	2.98	□□□□□ -1.93
SOK1	YDR006C	SKG3	Q06315	1026 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	MCH5	Q08777	521 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	YDL177C	Q12257	170 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	RRD2	Q12461	358 aa		2.98	□□□□□ -1.93
SOK1	YDR006C	YLR358C	O13565	187 aa		2.97	□□□□□ -1.93
SOK1	YDR006C	AI1	P03875	834 aa		2.97	□□□□□ -1.93
SOK1	YDR006C	VAS1	P07806	1104 aa	Known RBP	2.97	□□□□□ -1.93
SOK1	YDR006C	TPO5	P36029	618 aa		2.97	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 54.9 ms