RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	HBT1	Q07653	1046 aa	Known RBP	5.97	□□□□□ -1.45
RPN5	YDL147W	CRT10	Q08226	957 aa		5.97	□□□□□ -1.45
RPN5	YDL147W	ACF2	Q12168	779 aa		5.97	□□□□□ -1.45
RPN5	YDL147W	AAC1	P04710	309 aa		5.96	□□□□□ -1.46
RPN5	YDL147W	ERG8	P24521	451 aa		5.96	□□□□□ -1.46
RPN5	YDL147W	CDC15	P27636	974 aa		5.96	□□□□□ -1.46
RPN5	YDL147W	ESL2	P36168	1195 aa		5.96	□□□□□ -1.46
RPN5	YDL147W	YBL029W	P38201	376 aa		5.96	□□□□□ -1.46
RPN5	YDL147W	FUN12	P39730	1002 aa	Known RBP	5.96	□□□□□ -1.46
RPN5	YDL147W	MAM1	P40065	302 aa		5.96	□□□□□ -1.46
RPN5	YDL147W	PFK26	P40433	827 aa	Known RBP	5.96	□□□□□ -1.46
RPN5	YDL147W	RPS15	Q01855	142 aa	Known RBP	5.96	□□□□□ -1.46
RPN5	YDL147W	KIN4	Q01919	800 aa		5.96	□□□□□ -1.46
RPN5	YDL147W	FCP1	Q03254	732 aa		5.96	□□□□□ -1.46
RPN5	YDL147W	GTB1	Q04924	702 aa		5.96	□□□□□ -1.46
RPN5	YDL147W	STP3	Q05937	343 aa		5.96	□□□□□ -1.46
RPN5	YDL147W	FOB1	O13329	566 aa		5.95	□□□□□ -1.46
RPN5	YDL147W	TUB2	P02557	457 aa	Known RBP	5.95	□□□□□ -1.46
RPN5	YDL147W	RPB2	P08518	1224 aa	Known RBP	5.95	□□□□□ -1.46
RPN5	YDL147W	TFC3	P34111	1160 aa		5.95	□□□□□ -1.46
RPN5	YDL147W	KTR3	P38130	404 aa	Predicted RBP	5.95	□□□□□ -1.46
RPN5	YDL147W	ARO9	P38840	513 aa	Predicted RBP	5.95	□□□□□ -1.46
RPN5	YDL147W	UBP7	P40453	1071 aa		5.95	□□□□□ -1.46
RPN5	YDL147W	LYS21	Q12122	440 aa	Known RBP	5.95	□□□□□ -1.46
RPN5	YDL147W	MDM20	Q12387	796 aa	Known RBP	5.95	□□□□□ -1.46
RPN5	YDL147W	YBR126W-A	Q8TGU7	68 aa		5.95	□□□□□ -1.46
RPN5	YDL147W	SEC53	P07283	254 aa	Known RBP	5.94	□□□□□ -1.46
RPN5	YDL147W	SAC6	P32599	642 aa	Known RBP	5.94	□□□□□ -1.46
RPN5	YDL147W	RPF2	P36160	344 aa	Known RBP	5.94	□□□□□ -1.46
RPN5	YDL147W	BDH2	P39713	417 aa		5.94	□□□□□ -1.46
RPN5	YDL147W	UBX6	P47049	396 aa		5.94	□□□□□ -1.46
RPN5	YDL147W	YDR179W-A	Q03983	463 aa		5.94	□□□□□ -1.46
RPN5	YDL147W	TDA9	Q04545	1251 aa		5.94	□□□□□ -1.46
RPN5	YDL147W	ESC8	Q08119	714 aa		5.94	□□□□□ -1.46
RPN5	YDL147W	WHI2	P12611	486 aa		5.93	□□□□□ -1.46
RPN5	YDL147W	KGD2	P19262	463 aa	Predicted RBP	5.93	□□□□□ -1.46
RPN5	YDL147W	PGS1	P25578	521 aa		5.93	□□□□□ -1.46
RPN5	YDL147W	LRE1	P25579	583 aa	Known RBP	5.93	□□□□□ -1.46
RPN5	YDL147W	MRPL9	P31334	269 aa		5.93	□□□□□ -1.46
RPN5	YDL147W	YPT10	P38146	199 aa		5.93	□□□□□ -1.46
RPN5	YDL147W	PSD1	P39006	500 aa		5.93	□□□□□ -1.46
RPN5	YDL147W	BUD16	P39988	312 aa		5.93	□□□□□ -1.46
RPN5	YDL147W	DJP1	P40564	432 aa		5.93	□□□□□ -1.46
RPN5	YDL147W	DUO1	P53168	247 aa	Known RBP	5.93	□□□□□ -1.46
RPN5	YDL147W	IMO32	P53219	342 aa		5.93	□□□□□ -1.46
RPN5	YDL147W	COQ6	P53318	479 aa		5.93	□□□□□ -1.46
RPN5	YDL147W	MRPL19	P53875	158 aa		5.93	□□□□□ -1.46
RPN5	YDL147W	MUB1	Q03162	620 aa		5.93	□□□□□ -1.46
RPN5	YDL147W	VIP1	Q06685	1146 aa	Known RBP	5.93	□□□□□ -1.46
RPN5	YDL147W	ERP4	Q12450	207 aa		5.93	□□□□□ -1.46
RPN5	YDL147W	ZPS1	Q12512	249 aa		5.93	□□□□□ -1.46
RPN5	YDL147W	VCX1	Q99385	411 aa		5.93	□□□□□ -1.46
RPN5	YDL147W	MET8	P15807	274 aa		5.92	□□□□□ -1.46
RPN5	YDL147W	CDC43	P18898	376 aa		5.92	□□□□□ -1.46
RPN5	YDL147W	SGM1	P47166	707 aa		5.92	□□□□□ -1.46
RPN5	YDL147W	YGR079W	P53249	370 aa		5.92	□□□□□ -1.46
RPN5	YDL147W	AAT1	Q01802	451 aa		5.92	□□□□□ -1.46
RPN5	YDL147W	YSA1	Q01976	231 aa		5.92	□□□□□ -1.46
RPN5	YDL147W	UBP16	Q02863	499 aa		5.92	□□□□□ -1.46
RPN5	YDL147W	YKU80	Q04437	629 aa		5.92	□□□□□ -1.46
RPN5	YDL147W	ENT4	Q07872	247 aa		5.92	□□□□□ -1.46
RPN5	YDL147W	GCN4	P03069	281 aa		5.91	□□□□□ -1.46
RPN5	YDL147W	RPL19A	P0CX82	189 aa	Known RBP	5.91	□□□□□ -1.46
RPN5	YDL147W	RPL19B	P0CX83	189 aa	Predicted RBP	5.91	□□□□□ -1.46
RPN5	YDL147W	SGF29	P25554	259 aa		5.91	□□□□□ -1.46
RPN5	YDL147W	ALY1	P36117	915 aa		5.91	□□□□□ -1.46
RPN5	YDL147W	ARF3	P40994	183 aa	RIP-Chip data	5.91	□□□□□ -1.46	not detected
RPN5	YDL147W	VTC2	P43585	828 aa		5.91	□□□□□ -1.46
RPN5	YDL147W	AAD10	P47182	288 aa		5.91	□□□□□ -1.46
RPN5	YDL147W	MSE1	P48525	536 aa		5.91	□□□□□ -1.46
RPN5	YDL147W	COG2	P53271	262 aa		5.91	□□□□□ -1.46
RPN5	YDL147W	SUN4	P53616	420 aa		5.91	□□□□□ -1.46
RPN5	YDL147W	MUK1	Q02866	612 aa		5.91	□□□□□ -1.46
RPN5	YDL147W	RAD30	Q04049	632 aa		5.91	□□□□□ -1.46
RPN5	YDL147W	ARP9	Q05123	467 aa		5.91	□□□□□ -1.46
RPN5	YDL147W	YLR287C	Q05881	355 aa		5.91	□□□□□ -1.46
RPN5	YDL147W	MRI1	Q06489	411 aa	Known RBP	5.91	□□□□□ -1.46
RPN5	YDL147W	YDL242W	Q07746	117 aa		5.91	□□□□□ -1.46
RPN5	YDL147W	YML003W	P0CF16	290 aa		5.9	□□□□□ -1.47
RPN5	YDL147W	RNR3	P21672	869 aa	Known RBP	5.9	□□□□□ -1.47
RPN5	YDL147W	YBR225W	P38321	900 aa		5.9	□□□□□ -1.47
RPN5	YDL147W	RTS1	P38903	757 aa		5.9	□□□□□ -1.47
RPN5	YDL147W	SLZ1	P40167	298 aa		5.9	□□□□□ -1.47
RPN5	YDL147W	STB4	P50104	949 aa		5.9	□□□□□ -1.47
RPN5	YDL147W	RPT6	Q01939	405 aa	Known RBP	5.9	□□□□□ -1.47
RPN5	YDL147W	PSK2	Q08217	1101 aa		5.9	□□□□□ -1.47
RPN5	YDL147W	NOP58	Q12499	511 aa	Known RBP	5.9	□□□□□ -1.47
RPN5	YDL147W	HSH49	Q99181	213 aa	Predicted RBP	5.9	□□□□□ -1.47
RPN5	YDL147W	CPA2	P03965	1118 aa	Known RBP	5.89	□□□□□ -1.47
RPN5	YDL147W	CHO2	P05374	869 aa	Known RBP	5.89	□□□□□ -1.47
RPN5	YDL147W	FUR1	P18562	216 aa	Known RBP	5.89	□□□□□ -1.47
RPN5	YDL147W	KIN3	P22209	435 aa		5.89	□□□□□ -1.47
RPN5	YDL147W	YCK1	P23291	538 aa		5.89	□□□□□ -1.47
RPN5	YDL147W	DMC1	P25453	334 aa		5.89	□□□□□ -1.47
RPN5	YDL147W	RFA2	P26754	273 aa	Known RBP	5.89	□□□□□ -1.47
RPN5	YDL147W	PEP3	P27801	918 aa		5.89	□□□□□ -1.47
RPN5	YDL147W	SRB5	P32585	307 aa		5.89	□□□□□ -1.47
RPN5	YDL147W	GIP4	P39732	760 aa		5.89	□□□□□ -1.47
RPN5	YDL147W	IME4	P41833	600 aa		5.89	□□□□□ -1.47
RPN5	YDL147W	IRC6	P43615	237 aa		5.89	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 56.9 ms