RNA–Protein interactions for RNA: YBL101C

ECM21, Transcript of Protein involved in regulating endocytosis of plasma membrane proteins, yeast

Gene ECM21, Length 3,354 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM21	YBL101C	SWH1	P35845	1188 aa		3.03	□□□□□ -1.92
ECM21	YBL101C	BAP2	P38084	609 aa		3.03	□□□□□ -1.92
ECM21	YBL101C	GPP2	P40106	250 aa	Known RBP	3.03	□□□□□ -1.92
ECM21	YBL101C	MGS1	P40151	587 aa		3.03	□□□□□ -1.92
ECM21	YBL101C	MOB1	P40484	314 aa		3.03	□□□□□ -1.92
ECM21	YBL101C	MNT3	P40549	630 aa		3.03	□□□□□ -1.92
ECM21	YBL101C	ASG7	P46993	209 aa		3.03	□□□□□ -1.92
ECM21	YBL101C	ERP6	P53198	216 aa		3.03	□□□□□ -1.92
ECM21	YBL101C	HOL1	P53389	586 aa		3.03	□□□□□ -1.92
ECM21	YBL101C	YPQ1	Q12010	308 aa		3.03	□□□□□ -1.92
ECM21	YBL101C	RRP6	Q12149	733 aa	Known RBP	3.03	□□□□□ -1.92
ECM21	YBL101C	NBP2	Q12163	236 aa		3.03	□□□□□ -1.92
ECM21	YBL101C	RMD5	Q12508	421 aa		3.03	□□□□□ -1.92
ECM21	YBL101C	ARD1	P07347	238 aa	Predicted RBP	3.03	□□□□□ -1.93
ECM21	YBL101C	TOP3	P13099	656 aa		3.03	□□□□□ -1.93
ECM21	YBL101C	PMS1	P14242	873 aa		3.03	□□□□□ -1.93
ECM21	YBL101C	PET123	P17558	318 aa		3.03	□□□□□ -1.93
ECM21	YBL101C	PPH22	P23595	377 aa		3.03	□□□□□ -1.93
ECM21	YBL101C	RAD51	P25454	400 aa		3.03	□□□□□ -1.93
ECM21	YBL101C	VMA3	P25515	160 aa		3.03	□□□□□ -1.93
ECM21	YBL101C	SMC1	P32908	1225 aa		3.03	□□□□□ -1.93
ECM21	YBL101C	YBL055C	P34220	418 aa	Predicted RBP	3.03	□□□□□ -1.93
ECM21	YBL101C	GCS1	P35197	352 aa		3.03	□□□□□ -1.93
ECM21	YBL101C	YSW1	P38280	609 aa		3.03	□□□□□ -1.93
ECM21	YBL101C	RGD1	P38339	666 aa		3.03	□□□□□ -1.93
ECM21	YBL101C	PCM1	P38628	557 aa	Known RBP	3.03	□□□□□ -1.93
ECM21	YBL101C	APM2	P38700	605 aa		3.03	□□□□□ -1.93
ECM21	YBL101C	NEM1	P38757	446 aa		3.03	□□□□□ -1.93
ECM21	YBL101C	PXA1	P41909	870 aa		3.03	□□□□□ -1.93
ECM21	YBL101C	PRP31	P49704	494 aa	Predicted RBP	3.03	□□□□□ -1.93
ECM21	YBL101C	DRN1	P53255	507 aa	Known RBP	3.03	□□□□□ -1.93
ECM21	YBL101C	MTQ2	Q03920	221 aa	Predicted RBP	3.03	□□□□□ -1.93
ECM21	YBL101C	YML082W	Q04533	649 aa	Known RBP	3.03	□□□□□ -1.93
ECM21	YBL101C	YLR287C	Q05881	355 aa		3.03	□□□□□ -1.93
ECM21	YBL101C	PTP2	P29461	750 aa		3.02	□□□□□ -1.93
ECM21	YBL101C	SMI1	P32566	505 aa		3.02	□□□□□ -1.93
ECM21	YBL101C	MRS6	P32864	603 aa	Known RBP	3.02	□□□□□ -1.93
ECM21	YBL101C	SRB2	P34162	210 aa		3.02	□□□□□ -1.93
ECM21	YBL101C	MRPL40	P36534	297 aa		3.02	□□□□□ -1.93
ECM21	YBL101C	NCL1	P38205	684 aa	Known RBP	3.02	□□□□□ -1.93
ECM21	YBL101C	CCT4	P39078	528 aa	Known RBP	3.02	□□□□□ -1.93
ECM21	YBL101C	XDJ1	P39102	459 aa		3.02	□□□□□ -1.93
ECM21	YBL101C	PRM9	P39551	298 aa		3.02	□□□□□ -1.93
ECM21	YBL101C	TMN3	P40071	706 aa		3.02	□□□□□ -1.93
ECM21	YBL101C	BTT1	P40314	149 aa	Predicted RBP	3.02	□□□□□ -1.93
ECM21	YBL101C	ALA1	P40825	983 aa	Known RBP	3.02	□□□□□ -1.93
ECM21	YBL101C	FLC3	P53121	802 aa		3.02	□□□□□ -1.93
ECM21	YBL101C	MUB1	Q03162	620 aa		3.02	□□□□□ -1.93
ECM21	YBL101C	MSH6	Q03834	1242 aa		3.02	□□□□□ -1.93
ECM21	YBL101C	UFO1	Q04511	668 aa		3.02	□□□□□ -1.93
ECM21	YBL101C	RTN1	Q04947	295 aa	Known RBP	3.02	□□□□□ -1.93
ECM21	YBL101C	TAF9	Q05027	157 aa		3.02	□□□□□ -1.93
ECM21	YBL101C	LCB5	Q06147	687 aa	Known RBP	3.02	□□□□□ -1.93
ECM21	YBL101C	PRP8	P33334	2413 aa	Known RBP	3.02	□□□□□ -1.93
ECM21	YBL101C	TFC3	P34111	1160 aa		3.02	□□□□□ -1.93
ECM21	YBL101C	YKL050C	P35736	922 aa		3.02	□□□□□ -1.93
ECM21	YBL101C	PCH2	P38126	564 aa		3.02	□□□□□ -1.93
ECM21	YBL101C	LAM1	P38851	1228 aa		3.02	□□□□□ -1.93
ECM21	YBL101C	SPC72	P39723	622 aa		3.02	□□□□□ -1.93
ECM21	YBL101C	DLD2	P46681	530 aa	Known RBP	3.02	□□□□□ -1.93
ECM21	YBL101C	GUF1	P46943	645 aa		3.02	□□□□□ -1.93
ECM21	YBL101C	NPY1	P53164	384 aa		3.02	□□□□□ -1.93
ECM21	YBL101C	PML39	Q03760	334 aa		3.02	□□□□□ -1.93
ECM21	YBL101C	IVY1	Q04934	453 aa		3.02	□□□□□ -1.93
ECM21	YBL101C	NDJ1	Q12366	352 aa		3.02	□□□□□ -1.93
ECM21	YBL101C	PDH1	Q12428	516 aa	Known RBP	3.02	□□□□□ -1.93
ECM21	YBL101C	SPE1	P08432	466 aa		3.01	□□□□□ -1.93
ECM21	YBL101C	MTF2	P10849	440 aa		3.01	□□□□□ -1.93
ECM21	YBL101C	GFD2	P25370	566 aa	Known RBP	3.01	□□□□□ -1.93
ECM21	YBL101C	PYC2	P32327	1180 aa	Known RBP	3.01	□□□□□ -1.93
ECM21	YBL101C	DEF1	P35732	738 aa	Known RBP	3.01	□□□□□ -1.93
ECM21	YBL101C	FSH1	P38777	243 aa	Known RBP	3.01	□□□□□ -1.93
ECM21	YBL101C	PEX28	P38848	579 aa		3.01	□□□□□ -1.93
ECM21	YBL101C	NUP60	P39705	539 aa		3.01	□□□□□ -1.93
ECM21	YBL101C	YEL075C	P39972	122 aa		3.01	□□□□□ -1.93
ECM21	YBL101C	LCP5	P40079	357 aa	Predicted RBP	3.01	□□□□□ -1.93
ECM21	YBL101C	YER189W	P40104	122 aa		3.01	□□□□□ -1.93
ECM21	YBL101C	BUD13	P46947	266 aa	Predicted RBP	3.01	□□□□□ -1.93
ECM21	YBL101C	RFX1	P48743	811 aa		3.01	□□□□□ -1.93
ECM21	YBL101C	PXR1	P53335	271 aa	Predicted RBP	3.01	□□□□□ -1.93
ECM21	YBL101C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	3.01	□□□□□ -1.93	not detected
ECM21	YBL101C	VTI1	Q04338	217 aa		3.01	□□□□□ -1.93
ECM21	YBL101C	TMN2	Q04562	672 aa		3.01	□□□□□ -1.93
ECM21	YBL101C	HPF1	Q05164	967 aa		3.01	□□□□□ -1.93
ECM21	YBL101C	CIA1	Q05583	330 aa		3.01	□□□□□ -1.93
ECM21	YBL101C	ORM2	Q06144	216 aa		3.01	□□□□□ -1.93
ECM21	YBL101C	YPQ2	Q06328	317 aa		3.01	□□□□□ -1.93
ECM21	YBL101C	YLR012C	Q07927	99 aa		3.01	□□□□□ -1.93
ECM21	YBL101C	APL5	Q08951	932 aa	Known RBP	3.01	□□□□□ -1.93
ECM21	YBL101C	YPL225W	Q08971	146 aa	Known RBP	3.01	□□□□□ -1.93
ECM21	YBL101C	TAF10	Q12030	206 aa		3.01	□□□□□ -1.93
ECM21	YBL101C	HRT3	Q12347	344 aa		3.01	□□□□□ -1.93
ECM21	YBL101C	CMR1	Q12510	522 aa	Known RBP	3.01	□□□□□ -1.93
ECM21	YBL101C	PYC1	P11154	1178 aa	Known RBP	3.01	□□□□□ -1.93
ECM21	YBL101C	SEC1	P30619	724 aa	Known RBP	3.01	□□□□□ -1.93
ECM21	YBL101C	DAL3	P32459	195 aa		3.01	□□□□□ -1.93
ECM21	YBL101C	RAD5	P32849	1169 aa	Predicted RBP	3.01	□□□□□ -1.93
ECM21	YBL101C	MRP8	P35719	219 aa		3.01	□□□□□ -1.93
ECM21	YBL101C	TBS1	P38114	1094 aa		3.01	□□□□□ -1.93
ECM21	YBL101C	QNS1	P38795	714 aa	Known RBP	3.01	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 59.7 ms