RNA–Protein interactions for RNA: ENSMUST00000110520.9

Trim9-201, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-201ENSMUST00000110520 NbdyA0A0N4SUI7 68 aa5.84□□□□□ -1.48
Trim9-201ENSMUST00000110520 Q8BGJ3 129 aa5.84□□□□□ -1.48
Trim9-201ENSMUST00000110520 Ndufb1P0DN34 57 aa5.83□□□□□ -1.48
Trim9-201ENSMUST00000110520 Dnah10D3YYQ8 4591 aa5.83□□□□□ -1.48
Trim9-201ENSMUST00000110520 Krtap13O88375 197 aa5.82□□□□□ -1.48
Trim9-201ENSMUST00000110520 OxtP35454 125 aa5.82□□□□□ -1.48
Trim9-201ENSMUST00000110520 2310050C09RikG5E8Z3 280 aa5.81□□□□□ -1.48
Trim9-201ENSMUST00000110520 Sox16Q62247 57 aa5.81□□□□□ -1.48
Trim9-201ENSMUST00000110520 Cypt14J3QPF7 87 aa5.78□□□□□ -1.48
Trim9-201ENSMUST00000110520 Csmd3Q80T79 3707 aa5.78□□□□□ -1.48
Trim9-201ENSMUST00000110520 Phxr4P15974 95 aa5.77□□□□□ -1.48
Trim9-201ENSMUST00000110520 Sec61gP60060 68 aa5.77□□□□□ -1.49
Trim9-201ENSMUST00000110520 H2al1kJ3QP08 105 aa5.74□□□□□ -1.49
Trim9-201ENSMUST00000110520 Gm2696A0A1W2P709 240 aa5.72□□□□□ -1.49
Trim9-201ENSMUST00000110520 Krtap29-1A2A5X4 342 aa5.71□□□□□ -1.5
Trim9-201ENSMUST00000110520 Krtap14O08640 167 aa5.71□□□□□ -1.5
Trim9-201ENSMUST00000110520 Gm21798J3QNU5 87 aa5.7□□□□□ -1.5
Trim9-201ENSMUST00000110520 H2al1mQ9DAD9 105 aa5.7□□□□□ -1.5
Trim9-201ENSMUST00000110520 Dnah14A0A140LIJ4 4489 aa5.7□□□□□ -1.5
Trim9-201ENSMUST00000110520 Gm37013Q8K491 104 aa5.7□□□□□ -1.5
Trim9-201ENSMUST00000110520 Gm16253D3Z167 63 aa5.67□□□□□ -1.5
Trim9-201ENSMUST00000110520 2310034C09RikQ9D746 214 aa5.67□□□□□ -1.5
Trim9-201ENSMUST00000110520 Dnah7bL7N1Y0 4068 aa5.66□□□□□ -1.5
Trim9-201ENSMUST00000110520 4930507D05RikQ8C9C9 103 aa5.63□□□□□ -1.51
Trim9-201ENSMUST00000110520 Limd2Q8BGB5 128 aa5.62□□□□□ -1.51
Trim9-201ENSMUST00000110520 Gm2310J3QNJ2 377 aa5.6□□□□□ -1.51
Trim9-201ENSMUST00000110520 Gm26620Q9CY65 116 aa5.59□□□□□ -1.51
Trim9-201ENSMUST00000110520 Uqcr11Q9CPX8 56 aa5.55□□□□□ -1.52
Trim9-201ENSMUST00000110520 Tnp2P11378 117 aa5.54□□□□□ -1.52
Trim9-201ENSMUST00000110520 Gm17606F6ZL36 78 aa5.52□□□□□ -1.53
Trim9-201ENSMUST00000110520 Gm4491E0CX42 125 aa5.51□□□□□ -1.53
Trim9-201ENSMUST00000110520 Gm10643Q3URG9 111 aa5.46□□□□□ -1.54
Trim9-201ENSMUST00000110520 Fras1Q80T14 4010 aa5.45□□□□□ -1.54
Trim9-201ENSMUST00000110520 Dnah6E9Q0B6 4144 aa5.45□□□□□ -1.54
Trim9-201ENSMUST00000110520 Gm9918Q8BUR5 174 aa5.45□□□□□ -1.54
Trim9-201ENSMUST00000110520 Krtap15-1Q9QZU5 150 aa5.45□□□□□ -1.54
Trim9-201ENSMUST00000110520 Rnase13Q5GAM7 153 aa5.42□□□□□ -1.54
Trim9-201ENSMUST00000110520 4933415A04RikQ9D443 101 aa5.41□□□□□ -1.54
Trim9-201ENSMUST00000110520 Gm3646F6S692 53 aa5.41□□□□□ -1.54
Trim9-201ENSMUST00000110520 Huwe1Q7TMY8 4377 aaKnown RBP5.39□□□□□ -1.55
Trim9-201ENSMUST00000110520 Gm3880A0A1B0GSB3 72 aa5.38□□□□□ -1.55
Trim9-201ENSMUST00000110520 Kmt2aP55200 3966 aa5.38□□□□□ -1.55
Trim9-201ENSMUST00000110520 Dnah5Q8VHE6 4621 aa5.36□□□□□ -1.55
Trim9-201ENSMUST00000110520 Dnah11E9Q7N9 4488 aa5.35□□□□□ -1.55
Trim9-201ENSMUST00000110520 PrkdcP97313 4128 aa5.34□□□□□ -1.55
Trim9-201ENSMUST00000110520 Gm12216A0A1W2P827 62 aa5.34□□□□□ -1.55
Trim9-201ENSMUST00000110520 Dnah3Q8BW94 4083 aa5.31□□□□□ -1.56
Trim9-201ENSMUST00000110520 Dnah17Q69Z23 4481 aa5.3□□□□□ -1.56
Trim9-201ENSMUST00000110520 CriptO70333 101 aa5.3□□□□□ -1.56
Trim9-201ENSMUST00000110520 Dnah9B1AR51 4484 aa5.29□□□□□ -1.56
Trim9-201ENSMUST00000110520 Gm5767A0A0J9YTU8 78 aa5.29□□□□□ -1.56
Trim9-201ENSMUST00000110520 Gm9821Q8K076 103 aa5.28□□□□□ -1.56
Trim9-201ENSMUST00000110520 PlecQ9QXS1 4691 aaKnown RBP5.26□□□□□ -1.57
Trim9-201ENSMUST00000110520 Gm5965D3Z724 196 aa5.25□□□□□ -1.57
Trim9-201ENSMUST00000110520 Stard9Q80TF6 4561 aa5.25□□□□□ -1.57
Trim9-201ENSMUST00000110520 D6Ertd527eA0A0N4SWI3 464 aa5.23□□□□□ -1.57
Trim9-201ENSMUST00000110520 Gm9736A0A1W2P7N1 277 aa5.21□□□□□ -1.57
Trim9-201ENSMUST00000110520 1700042G07RikB1AUF7 90 aa5.21□□□□□ -1.58
Trim9-201ENSMUST00000110520 TnxbO35452 4006 aa5.21□□□□□ -1.58
Trim9-201ENSMUST00000110520 Dnah7cA0A087WR13 4024 aa5.19□□□□□ -1.58
Trim9-201ENSMUST00000110520 Dnah1E9Q8T7 4250 aa5.17□□□□□ -1.58
Trim9-201ENSMUST00000110520 Gm9955Q8CEJ8 102 aa5.17□□□□□ -1.58
Trim9-201ENSMUST00000110520 Gm10382Q3V0T5 144 aa5.15□□□□□ -1.58
Trim9-201ENSMUST00000110520 Cox6b2Q80ZN9 88 aa5.15□□□□□ -1.58
Trim9-201ENSMUST00000110520 Rps29P62274 56 aa5.13□□□□□ -1.59
Trim9-201ENSMUST00000110520 2310079G19RikQ9D6L6 185 aa5.12□□□□□ -1.59
Trim9-201ENSMUST00000110520 Dnah7aE9Q0T8 4024 aa5.12□□□□□ -1.59
Trim9-201ENSMUST00000110520 Ryr3A2AGL3 4863 aa5.1□□□□□ -1.59
Trim9-201ENSMUST00000110520 Spink7Q6IE32 76 aa5.08□□□□□ -1.6
Trim9-201ENSMUST00000110520 Lrp1bQ9JI18 4599 aa5.07□□□□□ -1.6
Trim9-201ENSMUST00000110520 2310057N15RikQ9D6T8 200 aa5.06□□□□□ -1.6
Trim9-201ENSMUST00000110520 Rpl37Q9D823 97 aa5.05□□□□□ -1.6
Trim9-201ENSMUST00000110520 Vps13dB1ART2 4390 aa5.04□□□□□ -1.6
Trim9-201ENSMUST00000110520 Gm11939A2A592 99 aa5.03□□□□□ -1.6
Trim9-201ENSMUST00000110520 A930033H14RikG5E8X6 103 aa5.03□□□□□ -1.6
Trim9-201ENSMUST00000110520 Mp68P56379 58 aa5.03□□□□□ -1.6
Trim9-201ENSMUST00000110520 Hectd4E9Q2E4 4418 aa5□□□□□ -1.61
Trim9-201ENSMUST00000110520 Gm20537G3UYK7 97 aa5□□□□□ -1.61
Trim9-201ENSMUST00000110520 Krtap19-5O08632 62 aa4.97□□□□□ -1.61
Trim9-201ENSMUST00000110520 Lrp1Q91ZX7 4545 aaKnown RBP4.97□□□□□ -1.61
Trim9-201ENSMUST00000110520 Krtap3-2Q9D638 99 aa4.97□□□□□ -1.61
Trim9-201ENSMUST00000110520 Krtap3-3Q9D7P0 99 aa4.97□□□□□ -1.61
Trim9-201ENSMUST00000110520 Dync2h1Q45VK7 4306 aa4.96□□□□□ -1.61
Trim9-201ENSMUST00000110520 Sec61bQ9CQS8 96 aaKnown RBP4.96□□□□□ -1.62
Trim9-201ENSMUST00000110520 BC029722A0A0N4SW31 51 aa4.96□□□□□ -1.62
Trim9-201ENSMUST00000110520 Romo1P60603 79 aa4.94□□□□□ -1.62
Trim9-201ENSMUST00000110520 ApobE9Q414 4505 aa4.94□□□□□ -1.62
Trim9-201ENSMUST00000110520 Fam229aB2KGE5 128 aa4.93□□□□□ -1.62
Trim9-201ENSMUST00000110520 Gm10318A0A1W2P728 225 aa4.89□□□□□ -1.63
Trim9-201ENSMUST00000110520 Pkd1O08852 4293 aa4.88□□□□□ -1.63
Trim9-201ENSMUST00000110520 Ryr1E9PZQ0 5035 aa4.88□□□□□ -1.63
Trim9-201ENSMUST00000110520 Pla2g10Q9QXX3 151 aa4.88□□□□□ -1.63
Trim9-201ENSMUST00000110520 Fat1A0A1L1SQU7 4645 aa4.87□□□□□ -1.63
Trim9-201ENSMUST00000110520 Dnah2P0C6F1 4456 aa4.87□□□□□ -1.63
Trim9-201ENSMUST00000110520 Fat3Q8BNA6 4555 aa4.86□□□□□ -1.63
Trim9-201ENSMUST00000110520 Gm19426M0QWC7 77 aa4.86□□□□□ -1.63
Trim9-201ENSMUST00000110520 Vps13bQ80TY5 3993 aa4.84□□□□□ -1.63
Trim9-201ENSMUST00000110520 Dync1h1Q9JHU4 4644 aaKnown RBP4.83□□□□□ -1.64
Trim9-201ENSMUST00000110520 Crct1Q6PAI5 102 aa4.78□□□□□ -1.64
Trim9-201ENSMUST00000110520 HydinQ80W93 5154 aa4.77□□□□□ -1.65
Retrieved 100 of 22,080 RNA–protein pairs in 316.8 ms