RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Wfdc6bF6ULY1 148 aa8.72□□□□□ -1.01
Pdgfra-205ENSMUST00000201711 Cox6a2P43023 97 aa8.72□□□□□ -1.01
Pdgfra-205ENSMUST00000201711 Reg3aO09037 175 aa8.71□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 Phxr5P08399 672 aa8.71□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 Gm11627A6PWP4 55 aa8.71□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 6430550D23RikE9Q1X6 194 aa8.71□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 Phf5aP83870 110 aaKnown RBP8.71□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 Tenm1Q9WTS4 2731 aa8.71□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 TgO08710 2766 aa8.7□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 Gm44790A0A0N4SV91 103 aa8.7□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 Gm9508A0A1W2P7W0 230 aa8.7□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 Gm10320E9PW43 113 aa8.7□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 Cystm1Q8K353 104 aa8.7□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 Dmac1Q9CQ00 111 aa8.7□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 Igkv3-7A0A0G2JE31 119 aa8.69□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 FcgbpE9Q0B5 2583 aa8.69□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 Gm10267M0QWD8 85 aa8.69□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 A530084C06RikQ3UTW2 186 aa8.69□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 Atox1O08997 68 aaKnown RBP8.68□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 Gm28230A0A0A0MQ91 144 aa8.67□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 Gm11213A0A1B0GR83 88 aa8.67□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 CnbpP53996 178 aaKnown RBP8.67□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 Gm10642Q3TWM1 71 aa8.67□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 Mrpl34Q99N91 92 aa8.67□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 C130032M10RikQ8C888 123 aa8.66□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 Fam229bQ8CF36 80 aa8.66□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 Wfdc3Q14AE4 130 aa8.66□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 Igkv8-28A0A0G2JE47 121 aa8.65□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 Coa6Q8BGD8 79 aa8.65□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 Gm21886J3QJU9 214 aa8.65□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 Sox16Q62247 57 aa8.65□□□□□ -1.02
Pdgfra-205ENSMUST00000201711 Defb13Q8R2I4 64 aa8.65□□□□□ -1.03
Pdgfra-205ENSMUST00000201711 Gm28374F6SG70 93 aa8.64□□□□□ -1.03
Pdgfra-205ENSMUST00000201711 CubnQ9JLB4 3623 aa8.64□□□□□ -1.03
Pdgfra-205ENSMUST00000201711 Igkv3-3A0A140T8Q0 119 aa8.64□□□□□ -1.03
Pdgfra-205ENSMUST00000201711 Plac8Q9JI48 112 aa8.64□□□□□ -1.03
Pdgfra-205ENSMUST00000201711 1700074P13RikQ9D9G7 251 aa8.63□□□□□ -1.03
Pdgfra-205ENSMUST00000201711 Fbn1Q61554 2873 aaKnown RBP8.63□□□□□ -1.03
Pdgfra-205ENSMUST00000201711 A0A286YE49 62 aa8.63□□□□□ -1.03
Pdgfra-205ENSMUST00000201711 A330070K13RikQ8CA53 115 aa8.62□□□□□ -1.03
Pdgfra-205ENSMUST00000201711 H2al1bA0A087WP11 105 aa8.61□□□□□ -1.03
Pdgfra-205ENSMUST00000201711 H2al1kJ3QP08 105 aa8.61□□□□□ -1.03
Pdgfra-205ENSMUST00000201711 H2al1eQ810S6 105 aa8.61□□□□□ -1.03
Pdgfra-205ENSMUST00000201711 H2al1mQ9DAD9 105 aa8.61□□□□□ -1.03
Pdgfra-205ENSMUST00000201711 Spint4Q9D263 159 aa8.61□□□□□ -1.03
Pdgfra-205ENSMUST00000201711 Defb39Q70KL3 74 aa8.59□□□□□ -1.03
Pdgfra-205ENSMUST00000201711 Gm10197F6QEY5 67 aa8.58□□□□□ -1.04
Pdgfra-205ENSMUST00000201711 Q8BT88 171 aa8.58□□□□□ -1.04
Pdgfra-205ENSMUST00000201711 P84750 121 aa8.58□□□□□ -1.04
Pdgfra-205ENSMUST00000201711 Prol1E9PYQ4 312 aa8.57□□□□□ -1.04
Pdgfra-205ENSMUST00000201711 Q8K1L6 76 aa8.57□□□□□ -1.04
Pdgfra-205ENSMUST00000201711 Rpl37aP61514 92 aa8.56□□□□□ -1.04
Pdgfra-205ENSMUST00000201711 Gm5617Q91VN2 117 aa8.56□□□□□ -1.04
Pdgfra-205ENSMUST00000201711 Col7a1Q63870 2944 aa8.55□□□□□ -1.04
Pdgfra-205ENSMUST00000201711 Ccdc179J3QM76 67 aa8.54□□□□□ -1.04
Pdgfra-205ENSMUST00000201711 VwfQ8CIZ8 2813 aa8.52□□□□□ -1.05
Pdgfra-205ENSMUST00000201711 Gm20604F8WIA3 75 aa8.51□□□□□ -1.05
Pdgfra-205ENSMUST00000201711 Cdc42se1Q8BHL7 80 aa8.51□□□□□ -1.05
Pdgfra-205ENSMUST00000201711 Igkv8-19A0A0G2JFN8 121 aa8.5□□□□□ -1.05
Pdgfra-205ENSMUST00000201711 Gm7276Q3TYW4 209 aa8.49□□□□□ -1.05
Pdgfra-205ENSMUST00000201711 Anapc11Q9CPX9 84 aa8.49□□□□□ -1.05
Pdgfra-205ENSMUST00000201711 Defb9Q8R2I6 67 aa8.48□□□□□ -1.05
Pdgfra-205ENSMUST00000201711 A930002H24RikQ8C8Y3 163 aa8.47□□□□□ -1.05
Pdgfra-205ENSMUST00000201711 Gm17349F7BGH6 99 aa8.47□□□□□ -1.05
Pdgfra-205ENSMUST00000201711 Znf706Q9D115 76 aaKnown RBP8.47□□□□□ -1.05
Pdgfra-205ENSMUST00000201711 A730071L15RikQ8C4X0 137 aa8.45□□□□□ -1.06
Pdgfra-205ENSMUST00000201711 AI606181Q8C7B9 129 aa8.44□□□□□ -1.06
Pdgfra-205ENSMUST00000201711 LystP97412 3788 aa8.44□□□□□ -1.06
Pdgfra-205ENSMUST00000201711 SptssbQ925E8 76 aa8.44□□□□□ -1.06
Pdgfra-205ENSMUST00000201711 Spaca4Q80ZQ0 127 aa8.42□□□□□ -1.06
Pdgfra-205ENSMUST00000201711 Bean1Q9EQG5 255 aa8.42□□□□□ -1.06
Pdgfra-205ENSMUST00000201711 Chchd10Q7TNL9 138 aa8.41□□□□□ -1.06
Pdgfra-205ENSMUST00000201711 Coa5Q99M07 74 aa8.41□□□□□ -1.06
Pdgfra-205ENSMUST00000201711 9230102O04RikA2ASX7 82 aa8.39□□□□□ -1.07
Pdgfra-205ENSMUST00000201711 Gm27235Q3UW50 83 aa8.39□□□□□ -1.07
Pdgfra-205ENSMUST00000201711 Gm9507D3Z5T3 223 aa8.38□□□□□ -1.07
Pdgfra-205ENSMUST00000201711 Ndufb1P0DN34 57 aa8.35□□□□□ -1.07
Pdgfra-205ENSMUST00000201711 Gpr15lA0A0B4J1N3 78 aa8.34□□□□□ -1.07
Pdgfra-205ENSMUST00000201711 Fam104aA2A6P4 185 aa8.33□□□□□ -1.08
Pdgfra-205ENSMUST00000201711 Zcchc13Q9D548 170 aa8.33□□□□□ -1.08
Pdgfra-205ENSMUST00000201711 Sprr1aQ62266 144 aa8.33□□□□□ -1.08
Pdgfra-205ENSMUST00000201711 RetnlbQ99P86 105 aa8.32□□□□□ -1.08
Pdgfra-205ENSMUST00000201711 Sec61gP60060 68 aa8.31□□□□□ -1.08
Pdgfra-205ENSMUST00000201711 Gm10160F6Y577 67 aa8.29□□□□□ -1.08
Pdgfra-205ENSMUST00000201711 Phxr4P15974 95 aa8.29□□□□□ -1.08
Pdgfra-205ENSMUST00000201711 OxtP35454 125 aa8.29□□□□□ -1.08
Pdgfra-205ENSMUST00000201711 Krtap10-4Q08EG8 221 aa8.26□□□□□ -1.09
Pdgfra-205ENSMUST00000201711 AW011738F6S7Q2 159 aa8.25□□□□□ -1.09
Pdgfra-205ENSMUST00000201711 Ndufs5Q99LY9 106 aa8.25□□□□□ -1.09
Pdgfra-205ENSMUST00000201711 Ank2Q8C8R3 3898 aa8.24□□□□□ -1.09
Pdgfra-205ENSMUST00000201711 Tenm2Q9WTS5 2764 aa8.22□□□□□ -1.09
Pdgfra-205ENSMUST00000201711 Muc6Q80T03 2850 aa8.21□□□□□ -1.09
Pdgfra-205ENSMUST00000201711 6030445D17RikE9Q8F9 148 aa8.21□□□□□ -1.1
Pdgfra-205ENSMUST00000201711 2310061N02RikQ9D6S9 174 aa8.2□□□□□ -1.1
Pdgfra-205ENSMUST00000201711 Gm10999F6Q4M4 69 aa8.2□□□□□ -1.1
Pdgfra-205ENSMUST00000201711 Chtf8P0CG14 533 aa8.19□□□□□ -1.1
Pdgfra-205ENSMUST00000201711 Xirp2Q4U4S6 3784 aa8.18□□□□□ -1.1
Pdgfra-205ENSMUST00000201711 Gm20661K7N787 53 aa8.15□□□□□ -1.1
Pdgfra-205ENSMUST00000201711 Gm10065F6TJM2 114 aa8.14□□□□□ -1.11
Pdgfra-205ENSMUST00000201711 Defb1P56386 69 aa8.13□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms