RNA–Protein interactions for RNA: ENSMUST00000197984.4

Smarcc1-204, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 3,538 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-204ENSMUST00000197984 Fn1P11276 2477 aaKnown RBP10.22□□□□□ -0.77
Smarcc1-204ENSMUST00000197984 Igkv4-92A0A0B4J1I2 117 aa10.21□□□□□ -0.77
Smarcc1-204ENSMUST00000197984 Gm10267M0QWD8 85 aa10.21□□□□□ -0.78
Smarcc1-204ENSMUST00000197984 Fam168bQ80XQ8 194 aa10.21□□□□□ -0.78
Smarcc1-204ENSMUST00000197984 Rpl37aP61514 92 aa10.19□□□□□ -0.78
Smarcc1-204ENSMUST00000197984 Gm21886J3QJU9 214 aa10.18□□□□□ -0.78
Smarcc1-204ENSMUST00000197984 Igkv3-4A0A140T8Q4 119 aa10.17□□□□□ -0.78
Smarcc1-204ENSMUST00000197984 Snhg11Q4G0K9 87 aa10.16□□□□□ -0.78
Smarcc1-204ENSMUST00000197984 A0A286YE49 62 aa10.15□□□□□ -0.78
Smarcc1-204ENSMUST00000197984 9530053A07RikE9PVG8 2581 aa10.15□□□□□ -0.78
Smarcc1-204ENSMUST00000197984 Vpreb3D3Z6J4 130 aa10.14□□□□□ -0.79
Smarcc1-204ENSMUST00000197984 SptssbQ925E8 76 aa10.14□□□□□ -0.79
Smarcc1-204ENSMUST00000197984 Sprr4Q8CGN8 76 aa10.13□□□□□ -0.79
Smarcc1-204ENSMUST00000197984 Gm7138L7N2C3 230 aa10.11□□□□□ -0.79
Smarcc1-204ENSMUST00000197984 Gm3238W4VSP7 230 aa10.11□□□□□ -0.79
Smarcc1-204ENSMUST00000197984 Srrm2Q8BTI8 2703 aaKnown RBP10.1□□□□□ -0.79
Smarcc1-204ENSMUST00000197984 Gm16181B0V2H2 73 aa10.09□□□□□ -0.79
Smarcc1-204ENSMUST00000197984 Igkv3-12A0A140T8P0 119 aa10.08□□□□□ -0.8
Smarcc1-204ENSMUST00000197984 Ighv8-13A0A075B5Y0 101 aa10.08□□□□□ -0.8
Smarcc1-204ENSMUST00000197984 Cmc4Q61908 68 aa10.08□□□□□ -0.8
Smarcc1-204ENSMUST00000197984 Psors1c2Q80ZC9 134 aa10.08□□□□□ -0.8
Smarcc1-204ENSMUST00000197984 Obox2E9PXV9 151 aa10.07□□□□□ -0.8
Smarcc1-204ENSMUST00000197984 B9d2Q3UK10 175 aa10.07□□□□□ -0.8
Smarcc1-204ENSMUST00000197984 Sox16Q62247 57 aa10.05□□□□□ -0.8
Smarcc1-204ENSMUST00000197984 Gm7276Q3TYW4 209 aa10.04□□□□□ -0.8
Smarcc1-204ENSMUST00000197984 Spata3Q9D9T6 193 aa10.04□□□□□ -0.8
Smarcc1-204ENSMUST00000197984 Phxr4P15974 95 aa10.04□□□□□ -0.8
Smarcc1-204ENSMUST00000197984 4933415A04RikQ9D443 101 aa10.04□□□□□ -0.8
Smarcc1-204ENSMUST00000197984 Chtf8P0CG14 533 aa10.03□□□□□ -0.8
Smarcc1-204ENSMUST00000197984 Gm7137J3QMW1 236 aa10.02□□□□□ -0.81
Smarcc1-204ENSMUST00000197984 P84750 121 aa10.02□□□□□ -0.81
Smarcc1-204ENSMUST00000197984 Sslp1Q3UN54 99 aa10.01□□□□□ -0.81
Smarcc1-204ENSMUST00000197984 Gm28230A0A0A0MQ91 144 aa10.01□□□□□ -0.81
Smarcc1-204ENSMUST00000197984 Dmac1Q9CQ00 111 aa10.01□□□□□ -0.81
Smarcc1-204ENSMUST00000197984 TgO08710 2766 aa10□□□□□ -0.81
Smarcc1-204ENSMUST00000197984 Zcchc13Q9D548 170 aa10□□□□□ -0.81
Smarcc1-204ENSMUST00000197984 Gm16485Q8C4B7 115 aa10□□□□□ -0.81
Smarcc1-204ENSMUST00000197984 Fam104aA2A6P4 185 aa9.99□□□□□ -0.81
Smarcc1-204ENSMUST00000197984 Igkv3-3A0A140T8Q0 119 aa9.98□□□□□ -0.81
Smarcc1-204ENSMUST00000197984 U90926O08546 118 aa9.98□□□□□ -0.81
Smarcc1-204ENSMUST00000197984 FasnP19096 2504 aaKnown RBP9.97□□□□□ -0.81
Smarcc1-204ENSMUST00000197984 Csmd3Q80T79 3707 aa9.97□□□□□ -0.81
Smarcc1-204ENSMUST00000197984 Gm12353A2AGJ4 60 aa9.96□□□□□ -0.81
Smarcc1-204ENSMUST00000197984 Ube2aQ9Z255 152 aa9.96□□□□□ -0.81
Smarcc1-204ENSMUST00000197984 Ccdc179J3QM76 67 aa9.94□□□□□ -0.82
Smarcc1-204ENSMUST00000197984 Ndufs5Q99LY9 106 aa9.94□□□□□ -0.82
Smarcc1-204ENSMUST00000197984 Igkv3-7A0A0G2JE31 119 aa9.93□□□□□ -0.82
Smarcc1-204ENSMUST00000197984 VwfQ8CIZ8 2813 aa9.93□□□□□ -0.82
Smarcc1-204ENSMUST00000197984 Gm10837Q3UTT8 145 aa9.93□□□□□ -0.82
Smarcc1-204ENSMUST00000197984 Gm36176A0A1W2P8D5 158 aa9.92□□□□□ -0.82
Smarcc1-204ENSMUST00000197984 Wfdc6bF6ULY1 148 aa9.91□□□□□ -0.82
Smarcc1-204ENSMUST00000197984 Gm20661K7N787 53 aa9.89□□□□□ -0.83
Smarcc1-204ENSMUST00000197984 Igsf10Q3V1M1 2594 aa9.88□□□□□ -0.83
Smarcc1-204ENSMUST00000197984 Gm10160F6Y577 67 aa9.88□□□□□ -0.83
Smarcc1-204ENSMUST00000197984 AplnQ9R0R4 77 aa9.83□□□□□ -0.84
Smarcc1-204ENSMUST00000197984 Pkd1l1Q8R526 2615 aa9.83□□□□□ -0.84
Smarcc1-204ENSMUST00000197984 Gm11627A6PWP4 55 aa9.82□□□□□ -0.84
Smarcc1-204ENSMUST00000197984 Gm3646F6S692 53 aa9.81□□□□□ -0.84
Smarcc1-204ENSMUST00000197984 1700042G07RikB1AUF7 90 aa9.81□□□□□ -0.84
Smarcc1-204ENSMUST00000197984 Gm4707V9GXN5 68 aa9.8□□□□□ -0.84
Smarcc1-204ENSMUST00000197984 Gm37013Q8K491 104 aa9.79□□□□□ -0.84
Smarcc1-204ENSMUST00000197984 Phxr5P08399 672 aa9.79□□□□□ -0.84
Smarcc1-204ENSMUST00000197984 Chchd10Q7TNL9 138 aa9.79□□□□□ -0.84
Smarcc1-204ENSMUST00000197984 Odf3bQ5M8M2 238 aa9.78□□□□□ -0.84
Smarcc1-204ENSMUST00000197984 Gm26620Q9CY65 116 aa9.77□□□□□ -0.84
Smarcc1-204ENSMUST00000197984 Igkv3-5A0A140T8M6 119 aa9.76□□□□□ -0.85
Smarcc1-204ENSMUST00000197984 Prol1E9PYQ4 312 aa9.76□□□□□ -0.85
Smarcc1-204ENSMUST00000197984 Phf5aP83870 110 aaKnown RBP9.76□□□□□ -0.85
Smarcc1-204ENSMUST00000197984 SycnQ8VCK7 134 aa9.76□□□□□ -0.85
Smarcc1-204ENSMUST00000197984 Stab2Q8R4U0 2559 aa9.74□□□□□ -0.85
Smarcc1-204ENSMUST00000197984 Gm9508A0A1W2P7W0 230 aa9.73□□□□□ -0.85
Smarcc1-204ENSMUST00000197984 Wfdc17Q5SSJ1 76 aa9.73□□□□□ -0.85
Smarcc1-204ENSMUST00000197984 Ndufb1P0DN34 57 aa9.71□□□□□ -0.86
Smarcc1-204ENSMUST00000197984 OxtP35454 125 aa9.7□□□□□ -0.86
Smarcc1-204ENSMUST00000197984 Sprr1aQ62266 144 aa9.69□□□□□ -0.86
Smarcc1-204ENSMUST00000197984 Wfdc10Q3V2J9 124 aa9.69□□□□□ -0.86
Smarcc1-204ENSMUST00000197984 Defb10Q8R2I8 73 aa9.67□□□□□ -0.86
Smarcc1-204ENSMUST00000197984 Anapc11Q9CPX9 84 aa9.61□□□□□ -0.87
Smarcc1-204ENSMUST00000197984 Gm10642Q3TWM1 71 aa9.61□□□□□ -0.87
Smarcc1-204ENSMUST00000197984 Gm10643Q3URG9 111 aa9.6□□□□□ -0.87
Smarcc1-204ENSMUST00000197984 Defb13Q8R2I4 64 aa9.59□□□□□ -0.87
Smarcc1-204ENSMUST00000197984 Wfdc3Q14AE4 130 aa9.58□□□□□ -0.88
Smarcc1-204ENSMUST00000197984 Gm20604F8WIA3 75 aa9.57□□□□□ -0.88
Smarcc1-204ENSMUST00000197984 Gm2310J3QNJ2 377 aa9.57□□□□□ -0.88
Smarcc1-204ENSMUST00000197984 Gm10139O88245 57 aa9.57□□□□□ -0.88
Smarcc1-204ENSMUST00000197984 Gm9821Q8K076 103 aa9.56□□□□□ -0.88
Smarcc1-204ENSMUST00000197984 1700012A03RikQ9DAF1 130 aa9.56□□□□□ -0.88
Smarcc1-204ENSMUST00000197984 Dnah10D3YYQ8 4591 aa9.56□□□□□ -0.88
Smarcc1-204ENSMUST00000197984 Gm21798J3QNU5 87 aa9.56□□□□□ -0.88
Smarcc1-204ENSMUST00000197984 Defb1P56386 69 aa9.55□□□□□ -0.88
Smarcc1-204ENSMUST00000197984 Defb9Q8R2I6 67 aa9.5□□□□□ -0.89
Smarcc1-204ENSMUST00000197984 Megf8P60882 2789 aa9.48□□□□□ -0.89
Smarcc1-204ENSMUST00000197984 Tenm2Q9WTS5 2764 aa9.46□□□□□ -0.89
Smarcc1-204ENSMUST00000197984 Muc6Q80T03 2850 aa9.46□□□□□ -0.9
Smarcc1-204ENSMUST00000197984 Gm10999F6Q4M4 69 aa9.45□□□□□ -0.9
Smarcc1-204ENSMUST00000197984 6030445D17RikE9Q8F9 148 aa9.44□□□□□ -0.9
Smarcc1-204ENSMUST00000197984 Dnah14A0A140LIJ4 4489 aa9.44□□□□□ -0.9
Smarcc1-204ENSMUST00000197984 Nupr2Q497P3 102 aa9.43□□□□□ -0.9
Smarcc1-204ENSMUST00000197984 Limd2Q8BGB5 128 aa9.42□□□□□ -0.9
Smarcc1-204ENSMUST00000197984 Defb39Q70KL3 74 aa9.41□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 49.2 ms