RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Acyp1P56376 99 aa5.43□□□□□ -1.54
Trim39-205ENSMUST00000173369 Gm11563B1AQ90 168 aa5.43□□□□□ -1.54
Trim39-205ENSMUST00000173369 Gm10320E9PW43 113 aa5.43□□□□□ -1.54
Trim39-205ENSMUST00000173369 Krtap4-7Q9D732 168 aa5.43□□□□□ -1.54
Trim39-205ENSMUST00000173369 A730009L09RikA0A1B0GS82 72 aa5.42□□□□□ -1.54
Trim39-205ENSMUST00000173369 Gm10401E9Q3K6 71 aa5.42□□□□□ -1.54
Trim39-205ENSMUST00000173369 Ndufa12Q7TMF3 145 aaKnown RBP5.42□□□□□ -1.54
Trim39-205ENSMUST00000173369 4930415O20RikQ8CDT5 131 aa5.42□□□□□ -1.54
Trim39-205ENSMUST00000173369 1700012A03RikQ9DAF1 130 aa5.42□□□□□ -1.54
Trim39-205ENSMUST00000173369 Fgf23Q9EPC2 251 aa5.42□□□□□ -1.54
Trim39-205ENSMUST00000173369 Wfdc12Q9JHY3 85 aa5.42□□□□□ -1.54
Trim39-205ENSMUST00000173369 P01823 113 aa5.41□□□□□ -1.54
Trim39-205ENSMUST00000173369 Igkv3-12A0A140T8P0 119 aa5.41□□□□□ -1.54
Trim39-205ENSMUST00000173369 Gm10570F6VB42 170 aa5.41□□□□□ -1.54
Trim39-205ENSMUST00000173369 Phpt1Q9DAK9 124 aa5.4□□□□□ -1.54
Trim39-205ENSMUST00000173369 P01755 137 aa5.39□□□□□ -1.55
Trim39-205ENSMUST00000173369 A830005F24RikQ8BRT5 167 aa5.39□□□□□ -1.55
Trim39-205ENSMUST00000173369 ApobE9Q414 4505 aa5.39□□□□□ -1.55
Trim39-205ENSMUST00000173369 Pkd1O08852 4293 aa5.38□□□□□ -1.55
Trim39-205ENSMUST00000173369 Psors1c2Q80ZC9 134 aa5.38□□□□□ -1.55
Trim39-205ENSMUST00000173369 Trav9d-4A0A0G2JG37 103 aa5.38□□□□□ -1.55
Trim39-205ENSMUST00000173369 Rmi2Q3UPE3 149 aa5.38□□□□□ -1.55
Trim39-205ENSMUST00000173369 Camk2n2Q78WH7 79 aa5.38□□□□□ -1.55
Trim39-205ENSMUST00000173369 Gm10308Q9CVR5 141 aa5.38□□□□□ -1.55
Trim39-205ENSMUST00000173369 LeprotO89013 131 aa5.37□□□□□ -1.55
Trim39-205ENSMUST00000173369 Herc2Q4U2R1 4836 aa5.37□□□□□ -1.55
Trim39-205ENSMUST00000173369 PcloQ9QYX7 5068 aa5.37□□□□□ -1.55
Trim39-205ENSMUST00000173369 Ighv1-56A0A0A6YXG2 117 aa5.37□□□□□ -1.55
Trim39-205ENSMUST00000173369 Fam229bQ8CF36 80 aa5.36□□□□□ -1.55
Trim39-205ENSMUST00000173369 Pkhd1E9PZ36 4059 aa5.36□□□□□ -1.55
Trim39-205ENSMUST00000173369 Igkv8-16A0A0G2JDG9 121 aa5.36□□□□□ -1.55
Trim39-205ENSMUST00000173369 Inafm2A0A1L1STD6 152 aa5.36□□□□□ -1.55
Trim39-205ENSMUST00000173369 Cox7b2Q9D2H1 82 aa5.36□□□□□ -1.55
Trim39-205ENSMUST00000173369 2310034C09RikQ9D746 214 aa5.36□□□□□ -1.55
Trim39-205ENSMUST00000173369 Zfand2aQ9JII7 171 aa5.36□□□□□ -1.55
Trim39-205ENSMUST00000173369 Kmt2cQ8BRH4 4903 aa5.35□□□□□ -1.55
Trim39-205ENSMUST00000173369 Chtf8P0CG14 533 aa5.35□□□□□ -1.55
Trim39-205ENSMUST00000173369 Abca13Q5SSE9 5034 aa5.35□□□□□ -1.55
Trim39-205ENSMUST00000173369 Sprr4Q8CGN8 76 aa5.35□□□□□ -1.55
Trim39-205ENSMUST00000173369 Sprr1bQ62267 153 aa5.34□□□□□ -1.55
Trim39-205ENSMUST00000173369 Fam168bQ80XQ8 194 aa5.34□□□□□ -1.55
Trim39-205ENSMUST00000173369 Ube2aQ9Z255 152 aa5.34□□□□□ -1.55
Trim39-205ENSMUST00000173369 HydinQ80W93 5154 aa5.34□□□□□ -1.56
Trim39-205ENSMUST00000173369 Igkv3-3A0A140T8Q0 119 aa5.34□□□□□ -1.56
Trim39-205ENSMUST00000173369 SycnQ8VCK7 134 aa5.34□□□□□ -1.56
Trim39-205ENSMUST00000173369 Lrp1Q91ZX7 4545 aaKnown RBP5.33□□□□□ -1.56
Trim39-205ENSMUST00000173369 4930524J08RikQ9CUJ5 163 aa5.33□□□□□ -1.56
Trim39-205ENSMUST00000173369 Kiaa1109A2AAE1 5005 aa5.33□□□□□ -1.56
Trim39-205ENSMUST00000173369 Gm10770F7D043 238 aa5.32□□□□□ -1.56
Trim39-205ENSMUST00000173369 Krtap15-1Q9QZU5 150 aa5.32□□□□□ -1.56
Trim39-205ENSMUST00000173369 Cypt14J3QPF7 87 aa5.32□□□□□ -1.56
Trim39-205ENSMUST00000173369 Defb50Q6TU36 73 aa5.32□□□□□ -1.56
Trim39-205ENSMUST00000173369 Ubl5Q9EPV8 73 aa5.31□□□□□ -1.56
Trim39-205ENSMUST00000173369 Ly6hQ9WUC3 139 aa5.31□□□□□ -1.56
Trim39-205ENSMUST00000173369 Lrp1bQ9JI18 4599 aa5.31□□□□□ -1.56
Trim39-205ENSMUST00000173369 Tnp2P11378 117 aa5.3□□□□□ -1.56
Trim39-205ENSMUST00000173369 2310034G01RikA0A286YDL3 209 aa5.3□□□□□ -1.56
Trim39-205ENSMUST00000173369 Gm3646F6S692 53 aa5.3□□□□□ -1.56
Trim39-205ENSMUST00000173369 Gm10518F6UQQ9 182 aa5.3□□□□□ -1.56
Trim39-205ENSMUST00000173369 Igkv8-21A0A140T8P7 120 aa5.3□□□□□ -1.56
Trim39-205ENSMUST00000173369 Prm2P07978 107 aa5.3□□□□□ -1.56
Trim39-205ENSMUST00000173369 Sprr1aQ62266 144 aa5.3□□□□□ -1.56
Trim39-205ENSMUST00000173369 Ighv2-2A0A075B5P8 116 aa5.29□□□□□ -1.56
Trim39-205ENSMUST00000173369 Igkv1-88A0A140T8N1 120 aa5.29□□□□□ -1.56
Trim39-205ENSMUST00000173369 Klk12B2RVZ0 247 aa5.29□□□□□ -1.56
Trim39-205ENSMUST00000173369 Atox1O08997 68 aaKnown RBP5.29□□□□□ -1.56
Trim39-205ENSMUST00000173369 RetnlbQ99P86 105 aa5.29□□□□□ -1.56
Trim39-205ENSMUST00000173369 Gm20538F6Z9R1 75 aa5.29□□□□□ -1.56
Trim39-205ENSMUST00000173369 Fam19a3Q7TPG6 132 aa5.29□□□□□ -1.56
Trim39-205ENSMUST00000173369 Reg3dQ9QUS9 175 aa5.29□□□□□ -1.56
Trim39-205ENSMUST00000173369 Igkv1-110A0A0B4J1I0 119 aa5.28□□□□□ -1.56
Trim39-205ENSMUST00000173369 Gm12216A0A1W2P827 62 aa5.28□□□□□ -1.56
Trim39-205ENSMUST00000173369 P06320 134 aa5.28□□□□□ -1.56
Trim39-205ENSMUST00000173369 Ormdl1Q921I0 153 aa5.28□□□□□ -1.56
Trim39-205ENSMUST00000173369 Igkv1-35A0A0G2JDE5 120 aa5.27□□□□□ -1.57
Trim39-205ENSMUST00000173369 Igkv3-7A0A0G2JE31 119 aa5.27□□□□□ -1.57
Trim39-205ENSMUST00000173369 1700074P13RikQ9D9G7 251 aa5.27□□□□□ -1.57
Trim39-205ENSMUST00000173369 Smim29Q8R043 75 aa5.27□□□□□ -1.57
Trim39-205ENSMUST00000173369 1700010B08RikQ9DAI7 102 aa5.27□□□□□ -1.57
Trim39-205ENSMUST00000173369 1700011M02RikB1AX35 88 aa5.26□□□□□ -1.57
Trim39-205ENSMUST00000173369 Adm2Q7TNK8 150 aa5.26□□□□□ -1.57
Trim39-205ENSMUST00000173369 Gm5617Q91VN2 117 aa5.26□□□□□ -1.57
Trim39-205ENSMUST00000173369 Defb9Q8R2I6 67 aa5.26□□□□□ -1.57
Trim39-205ENSMUST00000173369 Gm10549Q3URY4 149 aa5.25□□□□□ -1.57
Trim39-205ENSMUST00000173369 Q8BT88 171 aa5.25□□□□□ -1.57
Trim39-205ENSMUST00000173369 Birc6O88738 4882 aa5.25□□□□□ -1.57
Trim39-205ENSMUST00000173369 Gm16381A0A1Y7VKT9 73 aa5.24□□□□□ -1.57
Trim39-205ENSMUST00000173369 Defb29Q8BGW9 78 aa5.24□□□□□ -1.57
Trim39-205ENSMUST00000173369 Q9DAA7 145 aa5.24□□□□□ -1.57
Trim39-205ENSMUST00000173369 Gm11555B1AQ89 175 aa5.24□□□□□ -1.57
Trim39-205ENSMUST00000173369 P01821 116 aa5.24□□□□□ -1.57
Trim39-205ENSMUST00000173369 Sostdc1Q9CQN4 206 aa5.24□□□□□ -1.57
Trim39-205ENSMUST00000173369 Ighv10-3A0A075B5T6 119 aa5.23□□□□□ -1.57
Trim39-205ENSMUST00000173369 Gm10065F6TJM2 114 aa5.23□□□□□ -1.57
Trim39-205ENSMUST00000173369 Gm17577J3QNF7 156 aa5.23□□□□□ -1.57
Trim39-205ENSMUST00000173369 Lst1O08843 95 aa5.23□□□□□ -1.57
Trim39-205ENSMUST00000173369 Reg3aO09037 175 aa5.23□□□□□ -1.57
Trim39-205ENSMUST00000173369 Phxr4P15974 95 aa5.23□□□□□ -1.57
Trim39-205ENSMUST00000173369 Gm10577Q3UDV9 132 aa5.23□□□□□ -1.57
Trim39-205ENSMUST00000173369 Obox2E9PXV9 151 aa5.22□□□□□ -1.57
Retrieved 100 of 22,080 RNA–protein pairs in 180 ms