RNA–Protein interactions for RNA: ENSMUST00000112371.8

Scn1a-204, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn1a, Length 8,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-204ENSMUST00000112371 Cep350E9Q309 3095 aa3.56□□□□□ -1.84
Scn1a-204ENSMUST00000112371 Gm10267M0QWD8 85 aa3.56□□□□□ -1.84
Scn1a-204ENSMUST00000112371 Pla2g10Q9QXX3 151 aa3.56□□□□□ -1.84
Scn1a-204ENSMUST00000112371 Anapc11Q9CPX9 84 aa3.55□□□□□ -1.84
Scn1a-204ENSMUST00000112371 A030003K21RikA0A1Y7VIM3 128 aa3.55□□□□□ -1.84
Scn1a-204ENSMUST00000112371 Gm21798J3QNU5 87 aa3.55□□□□□ -1.84
Scn1a-204ENSMUST00000112371 Nf1Q04690 2841 aa3.55□□□□□ -1.84
Scn1a-204ENSMUST00000112371 Krtap11-1E9Q2E9 183 aa3.54□□□□□ -1.84
Scn1a-204ENSMUST00000112371 Dnah12Q3V0Q1 3086 aa3.54□□□□□ -1.84
Scn1a-204ENSMUST00000112371 Fam229bQ8CF36 80 aa3.54□□□□□ -1.84
Scn1a-204ENSMUST00000112371 Fbn2Q61555 2907 aa3.54□□□□□ -1.84
Scn1a-204ENSMUST00000112371 Defb40Q70KL2 73 aa3.53□□□□□ -1.84
Scn1a-204ENSMUST00000112371 Q8BT88 171 aa3.53□□□□□ -1.84
Scn1a-204ENSMUST00000112371 Gm40193A0A1B0GT39 78 aa3.53□□□□□ -1.84
Scn1a-204ENSMUST00000112371 Rnase13Q5GAM7 153 aa3.52□□□□□ -1.85
Scn1a-204ENSMUST00000112371 1700042G07RikB1AUF7 90 aa3.52□□□□□ -1.85
Scn1a-204ENSMUST00000112371 A730071L15RikQ8C4X0 137 aa3.52□□□□□ -1.85
Scn1a-204ENSMUST00000112371 Gpr15lA0A0B4J1N3 78 aa3.52□□□□□ -1.85
Scn1a-204ENSMUST00000112371 CdsnQ7TPC1 561 aa3.51□□□□□ -1.85
Scn1a-204ENSMUST00000112371 Camk2n1Q6QWF9 78 aa3.51□□□□□ -1.85
Scn1a-204ENSMUST00000112371 Wfdc13Q5DQQ6 81 aa3.5□□□□□ -1.85
Scn1a-204ENSMUST00000112371 AplnQ9R0R4 77 aa3.5□□□□□ -1.85
Scn1a-204ENSMUST00000112371 SmcpP15265 143 aa3.5□□□□□ -1.85
Scn1a-204ENSMUST00000112371 Chtf8P0CG14 533 aa3.5□□□□□ -1.85
Scn1a-204ENSMUST00000112371 Chd7A2AJK6 2986 aaKnown RBP3.5□□□□□ -1.85
Scn1a-204ENSMUST00000112371 Gm9821Q8K076 103 aa3.49□□□□□ -1.85
Scn1a-204ENSMUST00000112371 1700018G05RikA0A1B0GSI2 66 aa3.49□□□□□ -1.85
Scn1a-204ENSMUST00000112371 Tenm3Q9WTS6 2715 aa3.48□□□□□ -1.85
Scn1a-204ENSMUST00000112371 Cdh23Q99PF4 3354 aa3.48□□□□□ -1.85
Scn1a-204ENSMUST00000112371 Szt2A2A9C3 3431 aa3.47□□□□□ -1.85
Scn1a-204ENSMUST00000112371 Gm10999F6Q4M4 69 aa3.47□□□□□ -1.85
Scn1a-204ENSMUST00000112371 Gm16253D3Z167 63 aa3.46□□□□□ -1.86
Scn1a-204ENSMUST00000112371 Ash1lQ99MY8 2958 aa3.46□□□□□ -1.86
Scn1a-204ENSMUST00000112371 Dmxl1Q6PNC0 3013 aa3.46□□□□□ -1.86
Scn1a-204ENSMUST00000112371 Defb38Q7TNV7 63 aa3.46□□□□□ -1.86
Scn1a-204ENSMUST00000112371 Krtap24-1G3X9A2 248 aa3.46□□□□□ -1.86
Scn1a-204ENSMUST00000112371 Bod1lE9Q6J5 3032 aa3.46□□□□□ -1.86
Scn1a-204ENSMUST00000112371 A0A286YCN5 57 aa3.46□□□□□ -1.86
Scn1a-204ENSMUST00000112371 BptfA2A654 3036 aaKnown RBP3.45□□□□□ -1.86
Scn1a-204ENSMUST00000112371 Chd9Q8BYH8 2885 aa3.45□□□□□ -1.86
Scn1a-204ENSMUST00000112371 Wfdc17Q5SSJ1 76 aa3.44□□□□□ -1.86
Scn1a-204ENSMUST00000112371 2310034C09RikQ9D746 214 aa3.44□□□□□ -1.86
Scn1a-204ENSMUST00000112371 Unc80Q8BLN6 3261 aa3.44□□□□□ -1.86
Scn1a-204ENSMUST00000112371 Wdfy3Q6VNB8 3508 aa3.44□□□□□ -1.86
Scn1a-204ENSMUST00000112371 NbdyA0A0N4SUI7 68 aa3.44□□□□□ -1.86
Scn1a-204ENSMUST00000112371 KalrnA2CG49 2964 aa3.44□□□□□ -1.86
Scn1a-204ENSMUST00000112371 MgaA2AWL7 3003 aaKnown RBP3.42□□□□□ -1.86
Scn1a-204ENSMUST00000112371 OxtP35454 125 aa3.42□□□□□ -1.86
Scn1a-204ENSMUST00000112371 4933415A04RikQ9D443 101 aa3.42□□□□□ -1.86
Scn1a-204ENSMUST00000112371 Gm10139O88245 57 aa3.42□□□□□ -1.86
Scn1a-204ENSMUST00000112371 Megf8P60882 2789 aa3.42□□□□□ -1.86
Scn1a-204ENSMUST00000112371 Sprr1aQ62266 144 aa3.41□□□□□ -1.86
Scn1a-204ENSMUST00000112371 A330070K13RikQ8CA53 115 aa3.41□□□□□ -1.86
Scn1a-204ENSMUST00000112371 Cfap54Q8C6S9 3106 aa3.4□□□□□ -1.87
Scn1a-204ENSMUST00000112371 VwfQ8CIZ8 2813 aa3.39□□□□□ -1.87
Scn1a-204ENSMUST00000112371 Gm10642Q3TWM1 71 aa3.39□□□□□ -1.87
Scn1a-204ENSMUST00000112371 LrbaQ9ESE1 2856 aa3.38□□□□□ -1.87
Scn1a-204ENSMUST00000112371 Rpl37Q9D823 97 aa3.37□□□□□ -1.87
Scn1a-204ENSMUST00000112371 Gm3646F6S692 53 aa3.37□□□□□ -1.87
Scn1a-204ENSMUST00000112371 Fam229aB2KGE5 128 aa3.36□□□□□ -1.87
Scn1a-204ENSMUST00000112371 Romo1P60603 79 aa3.35□□□□□ -1.87
Scn1a-204ENSMUST00000112371 Sec61bQ9CQS8 96 aaKnown RBP3.35□□□□□ -1.87
Scn1a-204ENSMUST00000112371 Akap9Q70FJ1 3797 aa3.35□□□□□ -1.87
Scn1a-204ENSMUST00000112371 AspmQ8CJ27 3122 aa3.35□□□□□ -1.87
Scn1a-204ENSMUST00000112371 Ndufaf8A2AMZ4 74 aa3.35□□□□□ -1.87
Scn1a-204ENSMUST00000112371 Trank1Q8BV79 2999 aa3.34□□□□□ -1.87
Scn1a-204ENSMUST00000112371 Col6a3E9PWQ3 3284 aa3.34□□□□□ -1.88
Scn1a-204ENSMUST00000112371 Krtap14O08640 167 aa3.33□□□□□ -1.88
Scn1a-204ENSMUST00000112371 Celsr2Q9R0M0 2920 aa3.33□□□□□ -1.88
Scn1a-204ENSMUST00000112371 HttP42859 3119 aa3.33□□□□□ -1.88
Scn1a-204ENSMUST00000112371 Gm3250E9Q1M3 230 aa3.33□□□□□ -1.88
Scn1a-204ENSMUST00000112371 SpenQ62504 3644 aaKnown RBP3.32□□□□□ -1.88
Scn1a-204ENSMUST00000112371 Lama2Q60675 3118 aaKnown RBP3.32□□□□□ -1.88
Scn1a-204ENSMUST00000112371 SpegQ62407 3262 aa3.32□□□□□ -1.88
Scn1a-204ENSMUST00000112371 NbeaQ9EPN1 2936 aa3.31□□□□□ -1.88
Scn1a-204ENSMUST00000112371 Gm2310J3QNJ2 377 aa3.3□□□□□ -1.88
Scn1a-204ENSMUST00000112371 Fam168bQ80XQ8 194 aa3.3□□□□□ -1.88
Scn1a-204ENSMUST00000112371 Gm6217A0A1Y7VJK9 128 aa3.29□□□□□ -1.88
Scn1a-204ENSMUST00000112371 Gm884A2A9H6 3643 aa3.29□□□□□ -1.88
Scn1a-204ENSMUST00000112371 6030445D17RikE9Q8F9 148 aa3.29□□□□□ -1.88
Scn1a-204ENSMUST00000112371 Krtap29-1A2A5X4 342 aa3.28□□□□□ -1.88
Scn1a-204ENSMUST00000112371 DmdP11531 3678 aa3.28□□□□□ -1.88
Scn1a-204ENSMUST00000112371 BC029722A0A0N4SW31 51 aa3.28□□□□□ -1.88
Scn1a-204ENSMUST00000112371 Cystm1Q8K353 104 aa3.28□□□□□ -1.88
Scn1a-204ENSMUST00000112371 Defb9Q8R2I6 67 aa3.28□□□□□ -1.88
Scn1a-204ENSMUST00000112371 Krtap13O88375 197 aa3.27□□□□□ -1.89
Scn1a-204ENSMUST00000112371 Jbts17Q8CE72 3214 aa3.26□□□□□ -1.89
Scn1a-204ENSMUST00000112371 Defb1P56386 69 aa3.26□□□□□ -1.89
Scn1a-204ENSMUST00000112371 Gm17402F6Z0L5 76 aa3.25□□□□□ -1.89
Scn1a-204ENSMUST00000112371 Brca2P97929 3329 aa3.25□□□□□ -1.89
Scn1a-204ENSMUST00000112371 Prune2Q52KR3 3084 aa3.25□□□□□ -1.89
Scn1a-204ENSMUST00000112371 Gm4491E0CX42 125 aa3.24□□□□□ -1.89
Scn1a-204ENSMUST00000112371 Tenm4Q3UHK6 2771 aa3.24□□□□□ -1.89
Scn1a-204ENSMUST00000112371 FryE9Q8I9 3020 aa3.24□□□□□ -1.89
Scn1a-204ENSMUST00000112371 VcanQ62059 3357 aa3.24□□□□□ -1.89
Scn1a-204ENSMUST00000112371 Vps13aQ5H8C4 3166 aa3.24□□□□□ -1.89
Scn1a-204ENSMUST00000112371 AtmQ62388 3066 aa3.23□□□□□ -1.89
Scn1a-204ENSMUST00000112371 Ranbp2Q9ERU9 3053 aaKnown RBP3.23□□□□□ -1.89
Scn1a-204ENSMUST00000112371 Gm10382Q3V0T5 144 aa3.23□□□□□ -1.89
Scn1a-204ENSMUST00000112371 Dchs2A0A0A6YW72 3346 aa3.22□□□□□ -1.89
Retrieved 100 of 22,080 RNA–protein pairs in 68.3 ms