RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 HrnrQ8VHD8 2496 aa7.83□□□□□ -1.16
Col8a1-201ENSMUST00000089332 Kmt2bO08550 2713 aa7.83□□□□□ -1.16
Col8a1-201ENSMUST00000089332 Chd6A3KFM7 2711 aa7.83□□□□□ -1.16
Col8a1-201ENSMUST00000089332 Fam104aA2A6P4 185 aa7.82□□□□□ -1.16
Col8a1-201ENSMUST00000089332 Gm26620Q9CY65 116 aa7.82□□□□□ -1.16
Col8a1-201ENSMUST00000089332 Gm7138L7N2C3 230 aa7.8□□□□□ -1.16
Col8a1-201ENSMUST00000089332 Gm3238W4VSP7 230 aa7.8□□□□□ -1.16
Col8a1-201ENSMUST00000089332 Anapc11Q9CPX9 84 aa7.79□□□□□ -1.16
Col8a1-201ENSMUST00000089332 Mp68P56379 58 aa7.79□□□□□ -1.16
Col8a1-201ENSMUST00000089332 Itpr3P70227 2670 aa7.78□□□□□ -1.16
Col8a1-201ENSMUST00000089332 Phxr4P15974 95 aa7.78□□□□□ -1.16
Col8a1-201ENSMUST00000089332 Uqcr11Q9CPX8 56 aa7.78□□□□□ -1.16
Col8a1-201ENSMUST00000089332 AspmQ8CJ27 3122 aa7.77□□□□□ -1.17
Col8a1-201ENSMUST00000089332 Rnase13Q5GAM7 153 aa7.76□□□□□ -1.17
Col8a1-201ENSMUST00000089332 Gm7137J3QMW1 236 aa7.74□□□□□ -1.17
Col8a1-201ENSMUST00000089332 Phxr5P08399 672 aa7.73□□□□□ -1.17
Col8a1-201ENSMUST00000089332 Gm10065F6TJM2 114 aa7.72□□□□□ -1.17
Col8a1-201ENSMUST00000089332 Cypt14J3QPF7 87 aa7.72□□□□□ -1.17
Col8a1-201ENSMUST00000089332 NbdyA0A0N4SUI7 68 aa7.71□□□□□ -1.17
Col8a1-201ENSMUST00000089332 Igsf10Q3V1M1 2594 aa7.71□□□□□ -1.17
Col8a1-201ENSMUST00000089332 Muc2Q80Z19 2680 aa7.7□□□□□ -1.18
Col8a1-201ENSMUST00000089332 Szt2A2A9C3 3431 aa7.68□□□□□ -1.18
Col8a1-201ENSMUST00000089332 Lrrc37aB1AWG4 3215 aa7.67□□□□□ -1.18
Col8a1-201ENSMUST00000089332 Gm9821Q8K076 103 aa7.66□□□□□ -1.18
Col8a1-201ENSMUST00000089332 Chtf8P0CG14 533 aa7.66□□□□□ -1.18
Col8a1-201ENSMUST00000089332 Fam229bQ8CF36 80 aa7.66□□□□□ -1.18
Col8a1-201ENSMUST00000089332 Smim29Q8R043 75 aa7.65□□□□□ -1.19
Col8a1-201ENSMUST00000089332 Nbeal2Q6ZQA0 2742 aa7.63□□□□□ -1.19
Col8a1-201ENSMUST00000089332 Gm20538F6Z9R1 75 aa7.63□□□□□ -1.19
Col8a1-201ENSMUST00000089332 2310034C09RikQ9D746 214 aa7.63□□□□□ -1.19
Col8a1-201ENSMUST00000089332 Col6a5A6H584 2640 aa7.62□□□□□ -1.19
Col8a1-201ENSMUST00000089332 Tep1P97499 2629 aa7.62□□□□□ -1.19
Col8a1-201ENSMUST00000089332 Pkd1l1Q8R526 2615 aa7.61□□□□□ -1.19
Col8a1-201ENSMUST00000089332 Celsr1O35161 3034 aa7.6□□□□□ -1.19
Col8a1-201ENSMUST00000089332 Gm21798J3QNU5 87 aa7.6□□□□□ -1.19
Col8a1-201ENSMUST00000089332 Gm10643Q3URG9 111 aa7.6□□□□□ -1.19
Col8a1-201ENSMUST00000089332 9530053A07RikE9PVG8 2581 aa7.59□□□□□ -1.19
Col8a1-201ENSMUST00000089332 Unc80Q8BLN6 3261 aa7.58□□□□□ -1.2
Col8a1-201ENSMUST00000089332 Frem2Q6NVD0 3160 aa7.57□□□□□ -1.2
Col8a1-201ENSMUST00000089332 Gm10320E9PW43 113 aa7.56□□□□□ -1.2
Col8a1-201ENSMUST00000089332 BptfA2A654 3036 aaKnown RBP7.55□□□□□ -1.2
Col8a1-201ENSMUST00000089332 Stab2Q8R4U0 2559 aa7.54□□□□□ -1.2
Col8a1-201ENSMUST00000089332 Hivep1Q03172 2688 aa7.53□□□□□ -1.2
Col8a1-201ENSMUST00000089332 Pla2g10Q9QXX3 151 aa7.52□□□□□ -1.21
Col8a1-201ENSMUST00000089332 Odf3bQ5M8M2 238 aa7.51□□□□□ -1.21
Col8a1-201ENSMUST00000089332 Gm17349F7BGH6 99 aa7.5□□□□□ -1.21
Col8a1-201ENSMUST00000089332 Gm36176A0A1W2P8D5 158 aa7.49□□□□□ -1.21
Col8a1-201ENSMUST00000089332 Celsr3Q91ZI0 3301 aa7.49□□□□□ -1.21
Col8a1-201ENSMUST00000089332 Gm10139O88245 57 aa7.48□□□□□ -1.21
Col8a1-201ENSMUST00000089332 6030445D17RikE9Q8F9 148 aa7.48□□□□□ -1.21
Col8a1-201ENSMUST00000089332 Tex15F8VPN2 2785 aa7.48□□□□□ -1.21
Col8a1-201ENSMUST00000089332 Sprr1aQ62266 144 aa7.47□□□□□ -1.21
Col8a1-201ENSMUST00000089332 Gm9955Q8CEJ8 102 aa7.47□□□□□ -1.21
Col8a1-201ENSMUST00000089332 CriptO70333 101 aa7.47□□□□□ -1.21
Col8a1-201ENSMUST00000089332 Gm4491E0CX42 125 aa7.47□□□□□ -1.21
Col8a1-201ENSMUST00000089332 FrylF8VQ05 3007 aa7.46□□□□□ -1.21
Col8a1-201ENSMUST00000089332 Spink7Q6IE32 76 aa7.44□□□□□ -1.22
Col8a1-201ENSMUST00000089332 Lama1P19137 3084 aa7.44□□□□□ -1.22
Col8a1-201ENSMUST00000089332 Wdfy4E9Q2M9 3149 aa7.43□□□□□ -1.22
Col8a1-201ENSMUST00000089332 NbeaQ9EPN1 2936 aa7.42□□□□□ -1.22
Col8a1-201ENSMUST00000089332 Cystm1Q8K353 104 aa7.42□□□□□ -1.22
Col8a1-201ENSMUST00000089332 Gm9508A0A1W2P7W0 230 aa7.41□□□□□ -1.22
Col8a1-201ENSMUST00000089332 FryE9Q8I9 3020 aa7.41□□□□□ -1.22
Col8a1-201ENSMUST00000089332 Adgrg4B7ZCC9 3073 aa7.41□□□□□ -1.22
Col8a1-201ENSMUST00000089332 Dmxl2Q8BPN8 3032 aa7.4□□□□□ -1.22
Col8a1-201ENSMUST00000089332 Utp20Q5XG71 2788 aaKnown RBP7.4□□□□□ -1.22
Col8a1-201ENSMUST00000089332 Brca2P97929 3329 aa7.38□□□□□ -1.23
Col8a1-201ENSMUST00000089332 Krtap15-1Q9QZU5 150 aa7.38□□□□□ -1.23
Col8a1-201ENSMUST00000089332 Gm16253D3Z167 63 aa7.37□□□□□ -1.23
Col8a1-201ENSMUST00000089332 Col6a3E9PWQ3 3284 aa7.36□□□□□ -1.23
Col8a1-201ENSMUST00000089332 Fam229aB2KGE5 128 aa7.34□□□□□ -1.23
Col8a1-201ENSMUST00000089332 Itpr2Q9Z329 2701 aa7.34□□□□□ -1.23
Col8a1-201ENSMUST00000089332 Gm3880A0A1B0GSB3 72 aa7.34□□□□□ -1.23
Col8a1-201ENSMUST00000089332 FlncQ8VHX6 2726 aaKnown RBP7.32□□□□□ -1.24
Col8a1-201ENSMUST00000089332 DspE9Q557 2883 aaKnown RBP7.31□□□□□ -1.24
Col8a1-201ENSMUST00000089332 Sec61bQ9CQS8 96 aaKnown RBP7.31□□□□□ -1.24
Col8a1-201ENSMUST00000089332 A730071L15RikQ8C4X0 137 aa7.3□□□□□ -1.24
Col8a1-201ENSMUST00000089332 Dchs2A0A0A6YW72 3346 aa7.3□□□□□ -1.24
Col8a1-201ENSMUST00000089332 Zzef1Q5SSH7 2924 aa7.29□□□□□ -1.24
Col8a1-201ENSMUST00000089332 Krtap29-1A2A5X4 342 aa7.29□□□□□ -1.24
Col8a1-201ENSMUST00000089332 Igfn1Q3KNY0 2849 aa7.25□□□□□ -1.25
Col8a1-201ENSMUST00000089332 VcanQ62059 3357 aa7.24□□□□□ -1.25
Col8a1-201ENSMUST00000089332 Gm37013Q8K491 104 aa7.23□□□□□ -1.25
Col8a1-201ENSMUST00000089332 Celsr2Q9R0M0 2920 aa7.23□□□□□ -1.25
Col8a1-201ENSMUST00000089332 Gm5767A0A0J9YTU8 78 aa7.22□□□□□ -1.25
Col8a1-201ENSMUST00000089332 Chd9Q8BYH8 2885 aa7.2□□□□□ -1.26
Col8a1-201ENSMUST00000089332 Camk2n1Q6QWF9 78 aa7.18□□□□□ -1.26
Col8a1-201ENSMUST00000089332 FcgbpE9Q0B5 2583 aa7.18□□□□□ -1.26
Col8a1-201ENSMUST00000089332 Krtap13O88375 197 aa7.17□□□□□ -1.26
Col8a1-201ENSMUST00000089332 2310050C09RikG5E8Z3 280 aa7.15□□□□□ -1.26
Col8a1-201ENSMUST00000089332 Gm9507D3Z5T3 223 aa7.14□□□□□ -1.27
Col8a1-201ENSMUST00000089332 Dchs1E9PVD3 3291 aa7.12□□□□□ -1.27
Col8a1-201ENSMUST00000089332 Gm3646F6S692 53 aa7.12□□□□□ -1.27
Col8a1-201ENSMUST00000089332 Trank1Q8BV79 2999 aa7.1□□□□□ -1.27
Col8a1-201ENSMUST00000089332 BC029722A0A0N4SW31 51 aa7.08□□□□□ -1.28
Col8a1-201ENSMUST00000089332 Tenm4Q3UHK6 2771 aa7.07□□□□□ -1.28
Col8a1-201ENSMUST00000089332 Nf1Q04690 2841 aa7.07□□□□□ -1.28
Col8a1-201ENSMUST00000089332 TgO08710 2766 aa7.07□□□□□ -1.28
Col8a1-201ENSMUST00000089332 Gm19426M0QWC7 77 aa7.07□□□□□ -1.28
Col8a1-201ENSMUST00000089332 2310061N02RikQ9D6S9 174 aa7.07□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 54.9 ms