RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 Gm2696A0A1W2P709 240 aa6.64□□□□□ -1.35
Limch1-201ENSMUST00000038188 Fam229aB2KGE5 128 aa6.63□□□□□ -1.35
Limch1-201ENSMUST00000038188 Hivep1Q03172 2688 aa6.63□□□□□ -1.35
Limch1-201ENSMUST00000038188 Lrrc37aB1AWG4 3215 aa6.63□□□□□ -1.35
Limch1-201ENSMUST00000038188 Sec61bQ9CQS8 96 aaKnown RBP6.63□□□□□ -1.35
Limch1-201ENSMUST00000038188 Itpr2Q9Z329 2701 aa6.62□□□□□ -1.35
Limch1-201ENSMUST00000038188 Gm10135F6TEE5 83 aa6.62□□□□□ -1.35
Limch1-201ENSMUST00000038188 9230102O04RikA2ASX7 82 aa6.61□□□□□ -1.35
Limch1-201ENSMUST00000038188 Limd2Q8BGB5 128 aa6.61□□□□□ -1.35
Limch1-201ENSMUST00000038188 Spint4Q9D263 159 aa6.61□□□□□ -1.35
Limch1-201ENSMUST00000038188 Ash1lQ99MY8 2958 aa6.6□□□□□ -1.35
Limch1-201ENSMUST00000038188 Pkd1l1Q8R526 2615 aa6.59□□□□□ -1.35
Limch1-201ENSMUST00000038188 AspmQ8CJ27 3122 aa6.59□□□□□ -1.35
Limch1-201ENSMUST00000038188 Cypt14J3QPF7 87 aa6.58□□□□□ -1.36
Limch1-201ENSMUST00000038188 BtcQ05928 177 aa6.58□□□□□ -1.36
Limch1-201ENSMUST00000038188 Smim29Q8R043 75 aa6.57□□□□□ -1.36
Limch1-201ENSMUST00000038188 Atp5eP56382 52 aa6.56□□□□□ -1.36
Limch1-201ENSMUST00000038188 FcgbpE9Q0B5 2583 aa6.56□□□□□ -1.36
Limch1-201ENSMUST00000038188 NipblQ6KCD5 2798 aaKnown RBP6.55□□□□□ -1.36
Limch1-201ENSMUST00000038188 NbeaQ9EPN1 2936 aa6.54□□□□□ -1.36
Limch1-201ENSMUST00000038188 Spink7Q6IE32 76 aa6.53□□□□□ -1.36
Limch1-201ENSMUST00000038188 Gm10160F6Y577 67 aa6.52□□□□□ -1.36
Limch1-201ENSMUST00000038188 Chtf8P0CG14 533 aa6.52□□□□□ -1.36
Limch1-201ENSMUST00000038188 6030445D17RikE9Q8F9 148 aa6.52□□□□□ -1.37
Limch1-201ENSMUST00000038188 Celsr1O35161 3034 aa6.51□□□□□ -1.37
Limch1-201ENSMUST00000038188 Gm7276Q3TYW4 209 aa6.51□□□□□ -1.37
Limch1-201ENSMUST00000038188 Dmxl2Q8BPN8 3032 aa6.5□□□□□ -1.37
Limch1-201ENSMUST00000038188 BptfA2A654 3036 aaKnown RBP6.5□□□□□ -1.37
Limch1-201ENSMUST00000038188 Krtap29-1A2A5X4 342 aa6.5□□□□□ -1.37
Limch1-201ENSMUST00000038188 Wdfy4E9Q2M9 3149 aa6.5□□□□□ -1.37
Limch1-201ENSMUST00000038188 Chd6A3KFM7 2711 aa6.5□□□□□ -1.37
Limch1-201ENSMUST00000038188 Gm5767A0A0J9YTU8 78 aa6.49□□□□□ -1.37
Limch1-201ENSMUST00000038188 7530416G11RikJ3QJX6 159 aa6.49□□□□□ -1.37
Limch1-201ENSMUST00000038188 H2al1kJ3QP08 105 aa6.49□□□□□ -1.37
Limch1-201ENSMUST00000038188 Pla2g10Q9QXX3 151 aa6.48□□□□□ -1.37
Limch1-201ENSMUST00000038188 Cfap54Q8C6S9 3106 aa6.48□□□□□ -1.37
Limch1-201ENSMUST00000038188 Col6a3E9PWQ3 3284 aa6.47□□□□□ -1.37
Limch1-201ENSMUST00000038188 Utp20Q5XG71 2788 aaKnown RBP6.46□□□□□ -1.38
Limch1-201ENSMUST00000038188 Dchs2A0A0A6YW72 3346 aa6.45□□□□□ -1.38
Limch1-201ENSMUST00000038188 SvipQ3UZP4 77 aa6.45□□□□□ -1.38
Limch1-201ENSMUST00000038188 2310061N02RikQ9D6S9 174 aa6.44□□□□□ -1.38
Limch1-201ENSMUST00000038188 Sprr1aQ62266 144 aa6.44□□□□□ -1.38
Limch1-201ENSMUST00000038188 Pcp4P63054 62 aa6.43□□□□□ -1.38
Limch1-201ENSMUST00000038188 Odf3bQ5M8M2 238 aa6.43□□□□□ -1.38
Limch1-201ENSMUST00000038188 Ranbp2Q9ERU9 3053 aaKnown RBP6.43□□□□□ -1.38
Limch1-201ENSMUST00000038188 Prrc2cQ3TLH4 2846 aaKnown RBP6.43□□□□□ -1.38
Limch1-201ENSMUST00000038188 Stab2Q8R4U0 2559 aa6.41□□□□□ -1.38
Limch1-201ENSMUST00000038188 Frem2Q6NVD0 3160 aa6.41□□□□□ -1.38
Limch1-201ENSMUST00000038188 Brca2P97929 3329 aa6.39□□□□□ -1.39
Limch1-201ENSMUST00000038188 Gm4491E0CX42 125 aa6.38□□□□□ -1.39
Limch1-201ENSMUST00000038188 Gm12216A0A1W2P827 62 aa6.38□□□□□ -1.39
Limch1-201ENSMUST00000038188 Eif4ebp3Q80VV3 101 aa6.37□□□□□ -1.39
Limch1-201ENSMUST00000038188 FrylF8VQ05 3007 aa6.37□□□□□ -1.39
Limch1-201ENSMUST00000038188 Coa6Q8BGD8 79 aa6.35□□□□□ -1.39
Limch1-201ENSMUST00000038188 Gm20661K7N787 53 aa6.34□□□□□ -1.39
Limch1-201ENSMUST00000038188 Krtap14O08640 167 aa6.33□□□□□ -1.4
Limch1-201ENSMUST00000038188 Gm10139O88245 57 aa6.32□□□□□ -1.4
Limch1-201ENSMUST00000038188 DspE9Q557 2883 aaKnown RBP6.32□□□□□ -1.4
Limch1-201ENSMUST00000038188 VcanQ62059 3357 aa6.31□□□□□ -1.4
Limch1-201ENSMUST00000038188 Smr3aQ61900 147 aa6.31□□□□□ -1.4
Limch1-201ENSMUST00000038188 FlncQ8VHX6 2726 aaKnown RBP6.31□□□□□ -1.4
Limch1-201ENSMUST00000038188 Adgrg4B7ZCC9 3073 aa6.29□□□□□ -1.4
Limch1-201ENSMUST00000038188 Lama1P19137 3084 aa6.28□□□□□ -1.4
Limch1-201ENSMUST00000038188 2310034C09RikQ9D746 214 aa6.27□□□□□ -1.41
Limch1-201ENSMUST00000038188 Gm19426M0QWC7 77 aa6.25□□□□□ -1.41
Limch1-201ENSMUST00000038188 HrnrQ8VHD8 2496 aa6.24□□□□□ -1.41
Limch1-201ENSMUST00000038188 Sox16Q62247 57 aa6.23□□□□□ -1.41
Limch1-201ENSMUST00000038188 SnurfQ9WU12 71 aa6.23□□□□□ -1.41
Limch1-201ENSMUST00000038188 A930033H14RikG5E8X6 103 aa6.22□□□□□ -1.41
Limch1-201ENSMUST00000038188 2310057N15RikQ9D6T8 200 aa6.22□□□□□ -1.41
Limch1-201ENSMUST00000038188 Celsr3Q91ZI0 3301 aa6.22□□□□□ -1.41
Limch1-201ENSMUST00000038188 Gm10308Q9CVR5 141 aa6.22□□□□□ -1.41
Limch1-201ENSMUST00000038188 4930518I15RikQ3V2W7 57 aa6.21□□□□□ -1.41
Limch1-201ENSMUST00000038188 Krtap16-1A2A5X5 502 aa6.2□□□□□ -1.42
Limch1-201ENSMUST00000038188 A530084C06RikQ3UTW2 186 aa6.2□□□□□ -1.42
Limch1-201ENSMUST00000038188 Nf1Q04690 2841 aa6.19□□□□□ -1.42
Limch1-201ENSMUST00000038188 SpegQ62407 3262 aa6.18□□□□□ -1.42
Limch1-201ENSMUST00000038188 Wdfy3Q6VNB8 3508 aa6.18□□□□□ -1.42
Limch1-201ENSMUST00000038188 D6Ertd527eA0A0N4SWI3 464 aa6.18□□□□□ -1.42
Limch1-201ENSMUST00000038188 Gm16253D3Z167 63 aa6.17□□□□□ -1.42
Limch1-201ENSMUST00000038188 Gm10197F6QEY5 67 aa6.15□□□□□ -1.42
Limch1-201ENSMUST00000038188 Zfhx3Q61329 3726 aa6.15□□□□□ -1.43
Limch1-201ENSMUST00000038188 Trank1Q8BV79 2999 aa6.14□□□□□ -1.43
Limch1-201ENSMUST00000038188 Gm5965D3Z724 196 aa6.14□□□□□ -1.43
Limch1-201ENSMUST00000038188 Myo15aQ9QZZ4 3511 aa6.13□□□□□ -1.43
Limch1-201ENSMUST00000038188 Dchs1E9PVD3 3291 aa6.13□□□□□ -1.43
Limch1-201ENSMUST00000038188 Chd9Q8BYH8 2885 aa6.1□□□□□ -1.43
Limch1-201ENSMUST00000038188 Coa5Q99M07 74 aa6.09□□□□□ -1.43
Limch1-201ENSMUST00000038188 Zzef1Q5SSH7 2924 aa6.09□□□□□ -1.44
Limch1-201ENSMUST00000038188 Srrm2Q8BTI8 2703 aaKnown RBP6.08□□□□□ -1.44
Limch1-201ENSMUST00000038188 Gm21798J3QNU5 87 aa6.07□□□□□ -1.44
Limch1-201ENSMUST00000038188 Tenm3Q9WTS6 2715 aa6.07□□□□□ -1.44
Limch1-201ENSMUST00000038188 Gm19935A0A1B0GSF9 52 aa6.07□□□□□ -1.44
Limch1-201ENSMUST00000038188 Gm20538F6Z9R1 75 aa6.07□□□□□ -1.44
Limch1-201ENSMUST00000038188 Camk2n1Q6QWF9 78 aa6.07□□□□□ -1.44
Limch1-201ENSMUST00000038188 Cdc42se1Q8BHL7 80 aa6.05□□□□□ -1.44
Limch1-201ENSMUST00000038188 Vps13cQ8BX70 3748 aa6.05□□□□□ -1.44
Limch1-201ENSMUST00000038188 Tex15F8VPN2 2785 aa6.04□□□□□ -1.44
Limch1-201ENSMUST00000038188 Celsr2Q9R0M0 2920 aa6.03□□□□□ -1.44
Limch1-201ENSMUST00000038188 Rps29P62274 56 aa6.03□□□□□ -1.44
Retrieved 100 of 22,080 RNA–protein pairs in 96 ms