RNA–Protein interactions for RNA: ENSMUST00000029838.10

Rpf1-201, Transcript of Ribosome production factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rpf1, Length 1,661 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-201ENSMUST00000029838 Tmem213Q08EA8 116 aa10.58□□□□□ -0.72
Rpf1-201ENSMUST00000029838 Vpreb1P13372 142 aa10.57□□□□□ -0.72
Rpf1-201ENSMUST00000029838 Cox6a2P43023 97 aa10.57□□□□□ -0.72
Rpf1-201ENSMUST00000029838 6030445D17RikE9Q8F9 148 aa10.57□□□□□ -0.72
Rpf1-201ENSMUST00000029838 Sprr2jO70561 109 aa10.57□□□□□ -0.72
Rpf1-201ENSMUST00000029838 1600014C23RikQ9DAX4 101 aa10.57□□□□□ -0.72
Rpf1-201ENSMUST00000029838 Dnah9B1AR51 4484 aa10.56□□□□□ -0.72
Rpf1-201ENSMUST00000029838 Gm10139O88245 57 aa10.56□□□□□ -0.72
Rpf1-201ENSMUST00000029838 NbdyA0A0N4SUI7 68 aa10.55□□□□□ -0.72
Rpf1-201ENSMUST00000029838 P06320 134 aa10.55□□□□□ -0.72
Rpf1-201ENSMUST00000029838 Gm27235Q3UW50 83 aa10.55□□□□□ -0.72
Rpf1-201ENSMUST00000029838 Gm28374F6SG70 93 aa10.54□□□□□ -0.72
Rpf1-201ENSMUST00000029838 Adm2Q7TNK8 150 aa10.54□□□□□ -0.72
Rpf1-201ENSMUST00000029838 Ubl5Q9EPV8 73 aa10.54□□□□□ -0.72
Rpf1-201ENSMUST00000029838 Fam19a3Q7TPG6 132 aa10.53□□□□□ -0.72
Rpf1-201ENSMUST00000029838 A730071L15RikQ8C4X0 137 aa10.53□□□□□ -0.72
Rpf1-201ENSMUST00000029838 Igkv8-28A0A0G2JE47 121 aa10.51□□□□□ -0.73
Rpf1-201ENSMUST00000029838 A330070K13RikQ8CA53 115 aa10.51□□□□□ -0.73
Rpf1-201ENSMUST00000029838 Gm10308Q9CVR5 141 aa10.51□□□□□ -0.73
Rpf1-201ENSMUST00000029838 Igkv3-5A0A140T8M6 119 aa10.5□□□□□ -0.73
Rpf1-201ENSMUST00000029838 Igkv3-7A0A0G2JE31 119 aa10.5□□□□□ -0.73
Rpf1-201ENSMUST00000029838 Ccdc179J3QM76 67 aa10.5□□□□□ -0.73
Rpf1-201ENSMUST00000029838 Igkv1-110A0A0B4J1I0 119 aa10.49□□□□□ -0.73
Rpf1-201ENSMUST00000029838 Atp5eP56382 52 aa10.49□□□□□ -0.73
Rpf1-201ENSMUST00000029838 Krtap10-4Q08EG8 221 aa10.49□□□□□ -0.73
Rpf1-201ENSMUST00000029838 Gm10642Q3TWM1 71 aa10.49□□□□□ -0.73
Rpf1-201ENSMUST00000029838 Tmem254aP0DN89 123 aa10.48□□□□□ -0.73
Rpf1-201ENSMUST00000029838 Tmem254bP0DN90 123 aa10.48□□□□□ -0.73
Rpf1-201ENSMUST00000029838 Tmem254cP0DN91 123 aa10.48□□□□□ -0.73
Rpf1-201ENSMUST00000029838 Dnah7aE9Q0T8 4024 aa10.47□□□□□ -0.73
Rpf1-201ENSMUST00000029838 D130052B06RikQ3UW13 202 aa10.47□□□□□ -0.73
Rpf1-201ENSMUST00000029838 Wfdc13Q5DQQ6 81 aa10.47□□□□□ -0.73
Rpf1-201ENSMUST00000029838 Chchd10Q7TNL9 138 aa10.47□□□□□ -0.73
Rpf1-201ENSMUST00000029838 Igkv8-21A0A140T8P7 120 aa10.45□□□□□ -0.74
Rpf1-201ENSMUST00000029838 Znf706Q9D115 76 aaKnown RBP10.45□□□□□ -0.74
Rpf1-201ENSMUST00000029838 Anapc13Q8R034 74 aa10.44□□□□□ -0.74
Rpf1-201ENSMUST00000029838 Gm10570F6VB42 170 aa10.43□□□□□ -0.74
Rpf1-201ENSMUST00000029838 Wfdc3Q14AE4 130 aa10.42□□□□□ -0.74
Rpf1-201ENSMUST00000029838 4930535I16RikQ9CUI2 172 aa10.42□□□□□ -0.74
Rpf1-201ENSMUST00000029838 Tnp2P11378 117 aa10.41□□□□□ -0.74
Rpf1-201ENSMUST00000029838 MplkipQ9D011 178 aa10.41□□□□□ -0.74
Rpf1-201ENSMUST00000029838 Dnah7cA0A087WR13 4024 aa10.4□□□□□ -0.75
Rpf1-201ENSMUST00000029838 Odf3bQ5M8M2 238 aa10.38□□□□□ -0.75
Rpf1-201ENSMUST00000029838 Igkv3-4A0A140T8Q4 119 aa10.38□□□□□ -0.75
Rpf1-201ENSMUST00000029838 1700018G05RikA0A1B0GSI2 66 aa10.37□□□□□ -0.75
Rpf1-201ENSMUST00000029838 Gm20726G3UX18 150 aa10.37□□□□□ -0.75
Rpf1-201ENSMUST00000029838 Q8BT88 171 aa10.37□□□□□ -0.75
Rpf1-201ENSMUST00000029838 Defb39Q70KL3 74 aa10.35□□□□□ -0.75
Rpf1-201ENSMUST00000029838 Krtap13O88375 197 aa10.34□□□□□ -0.75
Rpf1-201ENSMUST00000029838 Hist1h4aP62806 103 aaKnown RBP10.34□□□□□ -0.75
Rpf1-201ENSMUST00000029838 ScxQ64124 207 aa10.34□□□□□ -0.75
Rpf1-201ENSMUST00000029838 Gm28230A0A0A0MQ91 144 aa10.33□□□□□ -0.76
Rpf1-201ENSMUST00000029838 Krtap14O08640 167 aa10.33□□□□□ -0.76
Rpf1-201ENSMUST00000029838 Mrpl34Q99N91 92 aa10.32□□□□□ -0.76
Rpf1-201ENSMUST00000029838 Gm20604F8WIA3 75 aa10.31□□□□□ -0.76
Rpf1-201ENSMUST00000029838 Igf1P05017 153 aa10.31□□□□□ -0.76
Rpf1-201ENSMUST00000029838 Igkv3-10A0A0G2JGN0 119 aa10.31□□□□□ -0.76
Rpf1-201ENSMUST00000029838 Rpl37aP61514 92 aa10.31□□□□□ -0.76
Rpf1-201ENSMUST00000029838 Gm37013Q8K491 104 aa10.31□□□□□ -0.76
Rpf1-201ENSMUST00000029838 Vps13dB1ART2 4390 aa10.3□□□□□ -0.76
Rpf1-201ENSMUST00000029838 UqcrqQ9CQ69 82 aa10.3□□□□□ -0.76
Rpf1-201ENSMUST00000029838 Gm44790A0A0N4SV91 103 aa10.28□□□□□ -0.76
Rpf1-201ENSMUST00000029838 Cypt14J3QPF7 87 aa10.28□□□□□ -0.76
Rpf1-201ENSMUST00000029838 C130032M10RikQ8C888 123 aa10.28□□□□□ -0.76
Rpf1-201ENSMUST00000029838 Bean1Q9EQG5 255 aa10.26□□□□□ -0.77
Rpf1-201ENSMUST00000029838 Dnah2P0C6F1 4456 aa10.26□□□□□ -0.77
Rpf1-201ENSMUST00000029838 Gm2696A0A1W2P709 240 aa10.25□□□□□ -0.77
Rpf1-201ENSMUST00000029838 Gm17689B3GLJ4 109 aa10.25□□□□□ -0.77
Rpf1-201ENSMUST00000029838 A0A1Y7VJH8 109 aa10.23□□□□□ -0.77
Rpf1-201ENSMUST00000029838 Krtap10-10A0A1W2P7T6 217 aa10.22□□□□□ -0.77
Rpf1-201ENSMUST00000029838 Gm21886J3QJU9 214 aa10.22□□□□□ -0.77
Rpf1-201ENSMUST00000029838 Ndufc1Q9CQY9 76 aa10.21□□□□□ -0.78
Rpf1-201ENSMUST00000029838 Pkd1O08852 4293 aa10.2□□□□□ -0.78
Rpf1-201ENSMUST00000029838 HrnrQ8VHD8 2496 aa10.2□□□□□ -0.78
Rpf1-201ENSMUST00000029838 Pcp4P63054 62 aa10.19□□□□□ -0.78
Rpf1-201ENSMUST00000029838 Anapc11Q9CPX9 84 aa10.16□□□□□ -0.78
Rpf1-201ENSMUST00000029838 Dnah5Q8VHE6 4621 aa10.15□□□□□ -0.79
Rpf1-201ENSMUST00000029838 Defa25Q5G864 92 aa10.13□□□□□ -0.79
Rpf1-201ENSMUST00000029838 Igkv8-19A0A0G2JFN8 121 aa10.12□□□□□ -0.79
Rpf1-201ENSMUST00000029838 Mrpl55Q9CZ83 127 aa10.12□□□□□ -0.79
Rpf1-201ENSMUST00000029838 Prr15lQ8JZM2 100 aa10.11□□□□□ -0.79
Rpf1-201ENSMUST00000029838 Prr13Q9CQJ5 137 aa10.1□□□□□ -0.79
Rpf1-201ENSMUST00000029838 Krtap4-2B1AQ85 167 aa10.09□□□□□ -0.79
Rpf1-201ENSMUST00000029838 Cystm1Q8K353 104 aa10.09□□□□□ -0.79
Rpf1-201ENSMUST00000029838 Gm16253D3Z167 63 aa10.08□□□□□ -0.8
Rpf1-201ENSMUST00000029838 Reg3aO09037 175 aa10.07□□□□□ -0.8
Rpf1-201ENSMUST00000029838 Serp2Q6TAW2 65 aa10.06□□□□□ -0.8
Rpf1-201ENSMUST00000029838 7530416G11RikJ3QJX6 159 aa10.05□□□□□ -0.8
Rpf1-201ENSMUST00000029838 ApobE9Q414 4505 aa10.05□□□□□ -0.8
Rpf1-201ENSMUST00000029838 Dph3Q8K0W9 82 aa10.04□□□□□ -0.8
Rpf1-201ENSMUST00000029838 Dync1h1Q9JHU4 4644 aaKnown RBP10.03□□□□□ -0.8
Rpf1-201ENSMUST00000029838 Samd13D3YUG0 102 aa10.02□□□□□ -0.81
Rpf1-201ENSMUST00000029838 4930518I15RikQ3V2W7 57 aa10.02□□□□□ -0.81
Rpf1-201ENSMUST00000029838 Fam229bQ8CF36 80 aa10.01□□□□□ -0.81
Rpf1-201ENSMUST00000029838 Gm28539A0A087WSL9 92 aa10□□□□□ -0.81
Rpf1-201ENSMUST00000029838 GhrhP16043 103 aa9.99□□□□□ -0.81
Rpf1-201ENSMUST00000029838 Naa38Q9D2U5 125 aa9.97□□□□□ -0.81
Rpf1-201ENSMUST00000029838 Spink8Q09TK9 105 aa9.96□□□□□ -0.82
Rpf1-201ENSMUST00000029838 Defb12Q8K4N3 78 aa9.96□□□□□ -0.82
Rpf1-201ENSMUST00000029838 A0A286YE49 62 aa9.95□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 53.2 ms