RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 9530003J23RikQ8BM26 151 aa13.14□□□□□ -0.31
Ctdsp1-201ENSMUST00000027367 Cdk2ap2Q9CPY4 127 aa13.13□□□□□ -0.31
Ctdsp1-201ENSMUST00000027367 Megf8P60882 2789 aa13.12□□□□□ -0.31
Ctdsp1-201ENSMUST00000027367 Gm11011D3Z3L9 86 aa13.1□□□□□ -0.31
Ctdsp1-201ENSMUST00000027367 Gm17349F7BGH6 99 aa13.1□□□□□ -0.31
Ctdsp1-201ENSMUST00000027367 Msrb1Q9JLC3 116 aa13.1□□□□□ -0.31
Ctdsp1-201ENSMUST00000027367 AW011738F6S7Q2 159 aa13.1□□□□□ -0.31
Ctdsp1-201ENSMUST00000027367 4933415A04RikQ9D443 101 aa13.09□□□□□ -0.31
Ctdsp1-201ENSMUST00000027367 Stab2Q8R4U0 2559 aa13.09□□□□□ -0.31
Ctdsp1-201ENSMUST00000027367 Sox16Q62247 57 aa13.07□□□□□ -0.32
Ctdsp1-201ENSMUST00000027367 BC048502Q80Y74 154 aa13.07□□□□□ -0.32
Ctdsp1-201ENSMUST00000027367 Sprr1aQ62266 144 aa13.07□□□□□ -0.32
Ctdsp1-201ENSMUST00000027367 2310061N02RikQ9D6S9 174 aa13.06□□□□□ -0.32
Ctdsp1-201ENSMUST00000027367 Smim29Q8R043 75 aa13.06□□□□□ -0.32
Ctdsp1-201ENSMUST00000027367 Muc6Q80T03 2850 aa13.06□□□□□ -0.32
Ctdsp1-201ENSMUST00000027367 Huwe1Q7TMY8 4377 aaKnown RBP13.05□□□□□ -0.32
Ctdsp1-201ENSMUST00000027367 Dync2h1Q45VK7 4306 aa13.05□□□□□ -0.32
Ctdsp1-201ENSMUST00000027367 Gm4707V9GXN5 68 aa13.05□□□□□ -0.32
Ctdsp1-201ENSMUST00000027367 Pkd1l1Q8R526 2615 aa13.04□□□□□ -0.32
Ctdsp1-201ENSMUST00000027367 Elof1P60003 83 aa13.03□□□□□ -0.32
Ctdsp1-201ENSMUST00000027367 Gm11627A6PWP4 55 aa13.02□□□□□ -0.33
Ctdsp1-201ENSMUST00000027367 Coa6Q8BGD8 79 aa13.02□□□□□ -0.33
Ctdsp1-201ENSMUST00000027367 Igkv3-12A0A140T8P0 119 aa13.01□□□□□ -0.33
Ctdsp1-201ENSMUST00000027367 Igkv8-28A0A0G2JE47 121 aa13□□□□□ -0.33
Ctdsp1-201ENSMUST00000027367 Gm10160F6Y577 67 aa12.99□□□□□ -0.33
Ctdsp1-201ENSMUST00000027367 Fam168bQ80XQ8 194 aa12.99□□□□□ -0.33
Ctdsp1-201ENSMUST00000027367 9230102O04RikA2ASX7 82 aa12.98□□□□□ -0.33
Ctdsp1-201ENSMUST00000027367 Defb37Q7TMD2 62 aa12.98□□□□□ -0.33
Ctdsp1-201ENSMUST00000027367 Prr15lQ8JZM2 100 aa12.98□□□□□ -0.33
Ctdsp1-201ENSMUST00000027367 Tenm2Q9WTS5 2764 aa12.98□□□□□ -0.33
Ctdsp1-201ENSMUST00000027367 TgO08710 2766 aa12.96□□□□□ -0.33
Ctdsp1-201ENSMUST00000027367 Gm7276Q3TYW4 209 aa12.96□□□□□ -0.34
Ctdsp1-201ENSMUST00000027367 Wfdc6bF6ULY1 148 aa12.95□□□□□ -0.34
Ctdsp1-201ENSMUST00000027367 P84750 121 aa12.94□□□□□ -0.34
Ctdsp1-201ENSMUST00000027367 A330070K13RikQ8CA53 115 aa12.94□□□□□ -0.34
Ctdsp1-201ENSMUST00000027367 Igkv3-2A0A075B5P0 119 aa12.93□□□□□ -0.34
Ctdsp1-201ENSMUST00000027367 Igkv1-122A0A140T8M9 119 aa12.92□□□□□ -0.34
Ctdsp1-201ENSMUST00000027367 Obox2E9PXV9 151 aa12.91□□□□□ -0.34
Ctdsp1-201ENSMUST00000027367 Atox1O08997 68 aaKnown RBP12.91□□□□□ -0.34
Ctdsp1-201ENSMUST00000027367 Dmac1Q9CQ00 111 aa12.91□□□□□ -0.34
Ctdsp1-201ENSMUST00000027367 Fam104aA2A6P4 185 aa12.89□□□□□ -0.35
Ctdsp1-201ENSMUST00000027367 Defb12Q8K4N3 78 aa12.89□□□□□ -0.35
Ctdsp1-201ENSMUST00000027367 Coa5Q99M07 74 aa12.89□□□□□ -0.35
Ctdsp1-201ENSMUST00000027367 Prol1E9PYQ4 312 aa12.88□□□□□ -0.35
Ctdsp1-201ENSMUST00000027367 Defb40Q70KL2 73 aa12.88□□□□□ -0.35
Ctdsp1-201ENSMUST00000027367 Sfta2E9PXB6 77 aa12.88□□□□□ -0.35
Ctdsp1-201ENSMUST00000027367 PrkdcP97313 4128 aa12.85□□□□□ -0.35
Ctdsp1-201ENSMUST00000027367 Sprr2jO70561 109 aa12.85□□□□□ -0.35
Ctdsp1-201ENSMUST00000027367 Fras1Q80T14 4010 aa12.84□□□□□ -0.35
Ctdsp1-201ENSMUST00000027367 1700042G07RikB1AUF7 90 aa12.83□□□□□ -0.35
Ctdsp1-201ENSMUST00000027367 Dnah11E9Q7N9 4488 aa12.83□□□□□ -0.36
Ctdsp1-201ENSMUST00000027367 Gm10837Q3UTT8 145 aa12.81□□□□□ -0.36
Ctdsp1-201ENSMUST00000027367 FcgbpE9Q0B5 2583 aa12.81□□□□□ -0.36
Ctdsp1-201ENSMUST00000027367 Igkv8-19A0A0G2JFN8 121 aa12.81□□□□□ -0.36
Ctdsp1-201ENSMUST00000027367 A0A286YE02 88 aa12.81□□□□□ -0.36
Ctdsp1-201ENSMUST00000027367 SycnQ8VCK7 134 aa12.79□□□□□ -0.36
Ctdsp1-201ENSMUST00000027367 PlecQ9QXS1 4691 aaKnown RBP12.78□□□□□ -0.36
Ctdsp1-201ENSMUST00000027367 Gm9507D3Z5T3 223 aa12.76□□□□□ -0.37
Ctdsp1-201ENSMUST00000027367 Nupr2Q497P3 102 aa12.76□□□□□ -0.37
Ctdsp1-201ENSMUST00000027367 Phxr4P15974 95 aa12.75□□□□□ -0.37
Ctdsp1-201ENSMUST00000027367 Gm26620Q9CY65 116 aa12.75□□□□□ -0.37
Ctdsp1-201ENSMUST00000027367 Ube2bP63147 152 aa12.74□□□□□ -0.37
Ctdsp1-201ENSMUST00000027367 Dnah9B1AR51 4484 aa12.74□□□□□ -0.37
Ctdsp1-201ENSMUST00000027367 FasnP19096 2504 aaKnown RBP12.74□□□□□ -0.37
Ctdsp1-201ENSMUST00000027367 Gm10643Q3URG9 111 aa12.73□□□□□ -0.37
Ctdsp1-201ENSMUST00000027367 C130032M10RikQ8C888 123 aa12.73□□□□□ -0.37
Ctdsp1-201ENSMUST00000027367 Zcchc13Q9D548 170 aa12.71□□□□□ -0.37
Ctdsp1-201ENSMUST00000027367 U90926O08546 118 aa12.68□□□□□ -0.38
Ctdsp1-201ENSMUST00000027367 Defb11Q8R2I7 77 aa12.68□□□□□ -0.38
Ctdsp1-201ENSMUST00000027367 Gm9918Q8BUR5 174 aa12.67□□□□□ -0.38
Ctdsp1-201ENSMUST00000027367 Cox6a2P43023 97 aa12.66□□□□□ -0.38
Ctdsp1-201ENSMUST00000027367 Vpreb3D3Z6J4 130 aa12.66□□□□□ -0.38
Ctdsp1-201ENSMUST00000027367 Plac8Q9JI48 112 aa12.65□□□□□ -0.38
Ctdsp1-201ENSMUST00000027367 Ube2aQ9Z255 152 aa12.65□□□□□ -0.38
Ctdsp1-201ENSMUST00000027367 PscaP57096 123 aa12.65□□□□□ -0.38
Ctdsp1-201ENSMUST00000027367 Mrpl34Q99N91 92 aa12.65□□□□□ -0.38
Ctdsp1-201ENSMUST00000027367 1700012A03RikQ9DAF1 130 aa12.64□□□□□ -0.39
Ctdsp1-201ENSMUST00000027367 Phf5aP83870 110 aaKnown RBP12.63□□□□□ -0.39
Ctdsp1-201ENSMUST00000027367 HrnrQ8VHD8 2496 aa12.61□□□□□ -0.39
Ctdsp1-201ENSMUST00000027367 Igkv3-3A0A140T8Q0 119 aa12.6□□□□□ -0.39
Ctdsp1-201ENSMUST00000027367 Gm17521F6QAC8 156 aa12.56□□□□□ -0.4
Ctdsp1-201ENSMUST00000027367 Gm44790A0A0N4SV91 103 aa12.55□□□□□ -0.4
Ctdsp1-201ENSMUST00000027367 Gm3646F6S692 53 aa12.55□□□□□ -0.4
Ctdsp1-201ENSMUST00000027367 Igkv3-4A0A140T8Q4 119 aa12.54□□□□□ -0.4
Ctdsp1-201ENSMUST00000027367 Defb9Q8R2I6 67 aa12.54□□□□□ -0.4
Ctdsp1-201ENSMUST00000027367 Wfdc13Q5DQQ6 81 aa12.54□□□□□ -0.4
Ctdsp1-201ENSMUST00000027367 Wfdc10Q3V2J9 124 aa12.53□□□□□ -0.4
Ctdsp1-201ENSMUST00000027367 Gm10139O88245 57 aa12.52□□□□□ -0.41
Ctdsp1-201ENSMUST00000027367 Gm37013Q8K491 104 aa12.51□□□□□ -0.41
Ctdsp1-201ENSMUST00000027367 OxtP35454 125 aa12.5□□□□□ -0.41
Ctdsp1-201ENSMUST00000027367 1700018G05RikA0A1B0GSI2 66 aa12.49□□□□□ -0.41
Ctdsp1-201ENSMUST00000027367 Gm10065F6TJM2 114 aa12.49□□□□□ -0.41
Ctdsp1-201ENSMUST00000027367 2310050C09RikG5E8Z3 280 aa12.49□□□□□ -0.41
Ctdsp1-201ENSMUST00000027367 Ly6g6cQ9Z1Q4 126 aa12.48□□□□□ -0.41
Ctdsp1-201ENSMUST00000027367 Dnah7aE9Q0T8 4024 aa12.46□□□□□ -0.41
Ctdsp1-201ENSMUST00000027367 Gm12353A2AGJ4 60 aa12.46□□□□□ -0.42
Ctdsp1-201ENSMUST00000027367 6030445D17RikE9Q8F9 148 aa12.45□□□□□ -0.42
Ctdsp1-201ENSMUST00000027367 A0A286YE49 62 aa12.44□□□□□ -0.42
Ctdsp1-201ENSMUST00000027367 1700074P13RikQ9D9G7 251 aa12.44□□□□□ -0.42
Ctdsp1-201ENSMUST00000027367 Krtap29-1A2A5X4 342 aa12.43□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms