RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Tmem213Q08EA8 116 aa10.41□□□□□ -0.74
Trim54-201ENSMUST00000013771 Rpl39lQ9CQD0 51 aa10.41□□□□□ -0.74
Trim54-201ENSMUST00000013771 A0A286YCN5 57 aa10.4□□□□□ -0.75
Trim54-201ENSMUST00000013771 Gm9736A0A1W2P7N1 277 aa10.39□□□□□ -0.75
Trim54-201ENSMUST00000013771 Phf5aP83870 110 aaKnown RBP10.38□□□□□ -0.75
Trim54-201ENSMUST00000013771 Gm11627A6PWP4 55 aa10.37□□□□□ -0.75
Trim54-201ENSMUST00000013771 Spata45Q9CVW4 97 aa10.37□□□□□ -0.75
Trim54-201ENSMUST00000013771 D130052B06RikQ3UW13 202 aa10.33□□□□□ -0.76
Trim54-201ENSMUST00000013771 Klk12B2RVZ0 247 aa10.33□□□□□ -0.76
Trim54-201ENSMUST00000013771 Fam168bQ80XQ8 194 aa10.33□□□□□ -0.76
Trim54-201ENSMUST00000013771 Fam19a5Q91WE9 132 aa10.33□□□□□ -0.76
Trim54-201ENSMUST00000013771 Gm7276Q3TYW4 209 aa10.32□□□□□ -0.76
Trim54-201ENSMUST00000013771 Ntn5Q3UQ22 452 aa10.32□□□□□ -0.76
Trim54-201ENSMUST00000013771 2310034G01RikA0A286YDL3 209 aa10.31□□□□□ -0.76
Trim54-201ENSMUST00000013771 Ighv10-3A0A075B5T6 119 aa10.3□□□□□ -0.76
Trim54-201ENSMUST00000013771 Ifitm6A0A1B0GS75 124 aa10.3□□□□□ -0.76
Trim54-201ENSMUST00000013771 Atp5eP56382 52 aa10.3□□□□□ -0.76
Trim54-201ENSMUST00000013771 Elof1P60003 83 aa10.3□□□□□ -0.76
Trim54-201ENSMUST00000013771 Fam19a1Q7TPG8 133 aa10.3□□□□□ -0.76
Trim54-201ENSMUST00000013771 Trav14d-3-dv8A0A075B619 120 aa10.29□□□□□ -0.76
Trim54-201ENSMUST00000013771 Ube2bP63147 152 aa10.28□□□□□ -0.76
Trim54-201ENSMUST00000013771 Igkv1-88A0A140T8N1 120 aa10.27□□□□□ -0.77
Trim54-201ENSMUST00000013771 Defa7P50705 93 aa10.27□□□□□ -0.77
Trim54-201ENSMUST00000013771 Igkv8-26A0A075B5N5 123 aa10.26□□□□□ -0.77
Trim54-201ENSMUST00000013771 Prol1E9PYQ4 312 aa10.26□□□□□ -0.77
Trim54-201ENSMUST00000013771 Wfdc6bF6ULY1 148 aa10.26□□□□□ -0.77
Trim54-201ENSMUST00000013771 Defa20Q45VN2 95 aa10.26□□□□□ -0.77
Trim54-201ENSMUST00000013771 Igkv4-58A0A0G2JGI6 119 aa10.25□□□□□ -0.77
Trim54-201ENSMUST00000013771 6030445D17RikE9Q8F9 148 aa10.25□□□□□ -0.77
Trim54-201ENSMUST00000013771 Gm7102J3QQ10 178 aa10.25□□□□□ -0.77
Trim54-201ENSMUST00000013771 Gm10320E9PW43 113 aa10.24□□□□□ -0.77
Trim54-201ENSMUST00000013771 Msrb1Q9JLC3 116 aa10.24□□□□□ -0.77
Trim54-201ENSMUST00000013771 Igkv2-109A0A075B5K6 120 aa10.24□□□□□ -0.77
Trim54-201ENSMUST00000013771 E130218I03RikA0A0U1RNU5 63 aa10.24□□□□□ -0.77
Trim54-201ENSMUST00000013771 Dmac1Q9CQ00 111 aa10.24□□□□□ -0.77
Trim54-201ENSMUST00000013771 Pde6gP09174 87 aa10.23□□□□□ -0.77
Trim54-201ENSMUST00000013771 Cd164Q9R0L9 197 aa10.23□□□□□ -0.77
Trim54-201ENSMUST00000013771 Obox2E9PXV9 151 aa10.22□□□□□ -0.77
Trim54-201ENSMUST00000013771 Anapc13Q8R034 74 aa10.22□□□□□ -0.77
Trim54-201ENSMUST00000013771 Gm10642Q3TWM1 71 aa10.2□□□□□ -0.78
Trim54-201ENSMUST00000013771 9530003J23RikQ8BM26 151 aa10.2□□□□□ -0.78
Trim54-201ENSMUST00000013771 Q9DAA7 145 aa10.2□□□□□ -0.78
Trim54-201ENSMUST00000013771 Gm10570F6VB42 170 aa10.19□□□□□ -0.78
Trim54-201ENSMUST00000013771 Lamtor3O88653 124 aa10.19□□□□□ -0.78
Trim54-201ENSMUST00000013771 GhrhP16043 103 aa10.19□□□□□ -0.78
Trim54-201ENSMUST00000013771 Fam19a3Q7TPG6 132 aa10.19□□□□□ -0.78
Trim54-201ENSMUST00000013771 P84750 121 aa10.17□□□□□ -0.78
Trim54-201ENSMUST00000013771 Ormdl1Q921I0 153 aa10.17□□□□□ -0.78
Trim54-201ENSMUST00000013771 Igkv8-27A0A0G2JF28 120 aa10.16□□□□□ -0.78
Trim54-201ENSMUST00000013771 Igkv8-30A0A140T8M3 121 aa10.16□□□□□ -0.78
Trim54-201ENSMUST00000013771 Gm28230A0A0A0MQ91 144 aa10.14□□□□□ -0.79
Trim54-201ENSMUST00000013771 Gm11011D3Z3L9 86 aa10.12□□□□□ -0.79
Trim54-201ENSMUST00000013771 Rbm3O89086 153 aaKnown RBP10.12□□□□□ -0.79
Trim54-201ENSMUST00000013771 Defb12Q8K4N3 78 aa10.12□□□□□ -0.79
Trim54-201ENSMUST00000013771 Gm10308Q9CVR5 141 aa10.11□□□□□ -0.79
Trim54-201ENSMUST00000013771 Sfta2E9PXB6 77 aa10.1□□□□□ -0.79
Trim54-201ENSMUST00000013771 Ccdc179J3QM76 67 aa10.09□□□□□ -0.79
Trim54-201ENSMUST00000013771 A930002H24RikQ8C8Y3 163 aa10.09□□□□□ -0.79
Trim54-201ENSMUST00000013771 Tmem254aP0DN89 123 aa10.08□□□□□ -0.8
Trim54-201ENSMUST00000013771 Tmem254bP0DN90 123 aa10.08□□□□□ -0.8
Trim54-201ENSMUST00000013771 Tmem254cP0DN91 123 aa10.08□□□□□ -0.8
Trim54-201ENSMUST00000013771 Defa4P28311 92 aa10.08□□□□□ -0.8
Trim54-201ENSMUST00000013771 Ubl5Q9EPV8 73 aa10.08□□□□□ -0.8
Trim54-201ENSMUST00000013771 Tmem243B2RVB9 118 aa10.07□□□□□ -0.8
Trim54-201ENSMUST00000013771 Wfdc10Q3V2J9 124 aa10.07□□□□□ -0.8
Trim54-201ENSMUST00000013771 HrnrQ8VHD8 2496 aa10.07□□□□□ -0.8
Trim54-201ENSMUST00000013771 Igkv1-122A0A140T8M9 119 aa10.07□□□□□ -0.8
Trim54-201ENSMUST00000013771 Gm20726G3UX18 150 aa10.06□□□□□ -0.8
Trim54-201ENSMUST00000013771 Smim29Q8R043 75 aa10.06□□□□□ -0.8
Trim54-201ENSMUST00000013771 A830005F24RikQ8BRT5 167 aa10.05□□□□□ -0.8
Trim54-201ENSMUST00000013771 Defb39Q70KL3 74 aa10.04□□□□□ -0.8
Trim54-201ENSMUST00000013771 Igkv8-21A0A140T8P7 120 aa10.02□□□□□ -0.81
Trim54-201ENSMUST00000013771 Krtap17-1A2A5X6 109 aa10.02□□□□□ -0.81
Trim54-201ENSMUST00000013771 Sprr2jO70561 109 aa10.02□□□□□ -0.81
Trim54-201ENSMUST00000013771 Gm12353A2AGJ4 60 aa10.01□□□□□ -0.81
Trim54-201ENSMUST00000013771 Defb37Q7TMD2 62 aa10.01□□□□□ -0.81
Trim54-201ENSMUST00000013771 A730071L15RikQ8C4X0 137 aa10.01□□□□□ -0.81
Trim54-201ENSMUST00000013771 Gm37389A0A0A6YW05 95 aa9.99□□□□□ -0.81
Trim54-201ENSMUST00000013771 Igkv3-7A0A0G2JE31 119 aa9.99□□□□□ -0.81
Trim54-201ENSMUST00000013771 Bean1Q9EQG5 255 aa9.99□□□□□ -0.81
Trim54-201ENSMUST00000013771 Ube2aQ9Z255 152 aa9.99□□□□□ -0.81
Trim54-201ENSMUST00000013771 Q8K1L6 76 aa9.99□□□□□ -0.81
Trim54-201ENSMUST00000013771 Igkv8-28A0A0G2JE47 121 aa9.98□□□□□ -0.81
Trim54-201ENSMUST00000013771 Hist1h4aP62806 103 aaKnown RBP9.98□□□□□ -0.81
Trim54-201ENSMUST00000013771 Vpreb3D3Z6J4 130 aa9.97□□□□□ -0.81
Trim54-201ENSMUST00000013771 Gm17521F6QAC8 156 aa9.97□□□□□ -0.81
Trim54-201ENSMUST00000013771 Cox6a2P43023 97 aa9.97□□□□□ -0.81
Trim54-201ENSMUST00000013771 A0A286YE02 88 aa9.96□□□□□ -0.82
Trim54-201ENSMUST00000013771 Gm10401E9Q3K6 71 aa9.96□□□□□ -0.82
Trim54-201ENSMUST00000013771 P06320 134 aa9.94□□□□□ -0.82
Trim54-201ENSMUST00000013771 Vpreb1P13372 142 aa9.94□□□□□ -0.82
Trim54-201ENSMUST00000013771 Gm27235Q3UW50 83 aa9.94□□□□□ -0.82
Trim54-201ENSMUST00000013771 AI606181Q8C7B9 129 aa9.94□□□□□ -0.82
Trim54-201ENSMUST00000013771 Anapc11Q9CPX9 84 aa9.91□□□□□ -0.82
Trim54-201ENSMUST00000013771 Igkv1-110A0A0B4J1I0 119 aa9.9□□□□□ -0.82
Trim54-201ENSMUST00000013771 Gm10139O88245 57 aa9.9□□□□□ -0.83
Trim54-201ENSMUST00000013771 Ndufc1Q9CQY9 76 aa9.89□□□□□ -0.83
Trim54-201ENSMUST00000013771 MplkipQ9D011 178 aa9.88□□□□□ -0.83
Trim54-201ENSMUST00000013771 Gm17689B3GLJ4 109 aa9.87□□□□□ -0.83
Trim54-201ENSMUST00000013771 Gm5965D3Z724 196 aa9.87□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 67.7 ms