RNA–Protein interactions for RNA: ENSMUST00000228044.1

Ldb3-208, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 BASIC

Gene Ldb3, Length 1,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-208ENSMUST00000228044 Defa20Q45VN2 95 aa9.99□□□□□ -0.81
Ldb3-208ENSMUST00000228044 Trav13n-2A0A0G2JF93 110 aa9.98□□□□□ -0.81
Ldb3-208ENSMUST00000228044 Gm11627A6PWP4 55 aa9.98□□□□□ -0.81
Ldb3-208ENSMUST00000228044 Defb40Q70KL2 73 aa9.97□□□□□ -0.81
Ldb3-208ENSMUST00000228044 Gm9805F6YK59 57 aa9.96□□□□□ -0.82
Ldb3-208ENSMUST00000228044 Igkv1-35A0A0G2JDE5 120 aa9.95□□□□□ -0.82
Ldb3-208ENSMUST00000228044 4930524J08RikQ9CUJ5 163 aa9.94□□□□□ -0.82
Ldb3-208ENSMUST00000228044 Mrpl52Q9D0Y8 121 aa9.94□□□□□ -0.82
Ldb3-208ENSMUST00000228044 Trav3-4A0A075B654 114 aa9.93□□□□□ -0.82
Ldb3-208ENSMUST00000228044 Igkv1-88A0A140T8N1 120 aa9.93□□□□□ -0.82
Ldb3-208ENSMUST00000228044 Gm10770F7D043 238 aa9.93□□□□□ -0.82
Ldb3-208ENSMUST00000228044 Cdk2ap2Q9CPY4 127 aa9.93□□□□□ -0.82
Ldb3-208ENSMUST00000228044 Lyrm7Q9DA03 104 aa9.93□□□□□ -0.82
Ldb3-208ENSMUST00000228044 PlecQ9QXS1 4691 aaKnown RBP9.92□□□□□ -0.82
Ldb3-208ENSMUST00000228044 Pou2af1Q64693 256 aa9.91□□□□□ -0.82
Ldb3-208ENSMUST00000228044 Klk12B2RVZ0 247 aa9.91□□□□□ -0.82
Ldb3-208ENSMUST00000228044 Nupr2Q497P3 102 aa9.91□□□□□ -0.82
Ldb3-208ENSMUST00000228044 Rpl39lQ9CQD0 51 aa9.9□□□□□ -0.82
Ldb3-208ENSMUST00000228044 Igkv3-2A0A075B5P0 119 aa9.89□□□□□ -0.83
Ldb3-208ENSMUST00000228044 2310034G01RikA0A286YDL3 209 aa9.89□□□□□ -0.83
Ldb3-208ENSMUST00000228044 PkigO70139 76 aa9.89□□□□□ -0.83
Ldb3-208ENSMUST00000228044 Gm10320E9PW43 113 aa9.89□□□□□ -0.83
Ldb3-208ENSMUST00000228044 Wfdc6bF6ULY1 148 aa9.89□□□□□ -0.83
Ldb3-208ENSMUST00000228044 Acyp1P56376 99 aa9.89□□□□□ -0.83
Ldb3-208ENSMUST00000228044 Gm10837Q3UTT8 145 aa9.89□□□□□ -0.83
Ldb3-208ENSMUST00000228044 BC048502Q80Y74 154 aa9.88□□□□□ -0.83
Ldb3-208ENSMUST00000228044 TeppQ6IMH0 216 aa9.87□□□□□ -0.83
Ldb3-208ENSMUST00000228044 TgO08710 2766 aa9.87□□□□□ -0.83
Ldb3-208ENSMUST00000228044 Fam168bQ80XQ8 194 aa9.87□□□□□ -0.83
Ldb3-208ENSMUST00000228044 Ighv10-1A0A0B4J1J6 119 aa9.86□□□□□ -0.83
Ldb3-208ENSMUST00000228044 Igkv4-58A0A0G2JGI6 119 aa9.86□□□□□ -0.83
Ldb3-208ENSMUST00000228044 2310050C09RikG5E8Z3 280 aa9.86□□□□□ -0.83
Ldb3-208ENSMUST00000228044 Gm10767Q3TQP0 103 aa9.86□□□□□ -0.83
Ldb3-208ENSMUST00000228044 Dnah11E9Q7N9 4488 aa9.86□□□□□ -0.83
Ldb3-208ENSMUST00000228044 Prol1E9PYQ4 312 aa9.85□□□□□ -0.83
Ldb3-208ENSMUST00000228044 Cd164Q9R0L9 197 aa9.85□□□□□ -0.83
Ldb3-208ENSMUST00000228044 Ly6g6cQ9Z1Q4 126 aa9.85□□□□□ -0.83
Ldb3-208ENSMUST00000228044 Smim29Q8R043 75 aa9.85□□□□□ -0.83
Ldb3-208ENSMUST00000228044 P84750 121 aa9.84□□□□□ -0.83
Ldb3-208ENSMUST00000228044 Obox2E9PXV9 151 aa9.83□□□□□ -0.84
Ldb3-208ENSMUST00000228044 5730596B20RikQ8BQ08 205 aa9.83□□□□□ -0.84
Ldb3-208ENSMUST00000228044 Dnah9B1AR51 4484 aa9.83□□□□□ -0.84
Ldb3-208ENSMUST00000228044 E130218I03RikA0A0U1RNU5 63 aa9.83□□□□□ -0.84
Ldb3-208ENSMUST00000228044 SycnQ8VCK7 134 aa9.83□□□□□ -0.84
Ldb3-208ENSMUST00000228044 Q9DAA7 145 aa9.83□□□□□ -0.84
Ldb3-208ENSMUST00000228044 Dmac1Q9CQ00 111 aa9.82□□□□□ -0.84
Ldb3-208ENSMUST00000228044 Elof1P60003 83 aa9.81□□□□□ -0.84
Ldb3-208ENSMUST00000228044 Gm7276Q3TYW4 209 aa9.81□□□□□ -0.84
Ldb3-208ENSMUST00000228044 Ntn5Q3UQ22 452 aa9.81□□□□□ -0.84
Ldb3-208ENSMUST00000228044 Plac8Q9JI48 112 aa9.81□□□□□ -0.84
Ldb3-208ENSMUST00000228044 Fam19a1Q7TPG8 133 aa9.81□□□□□ -0.84
Ldb3-208ENSMUST00000228044 Fam19a5Q91WE9 132 aa9.81□□□□□ -0.84
Ldb3-208ENSMUST00000228044 Msrb1Q9JLC3 116 aa9.81□□□□□ -0.84
Ldb3-208ENSMUST00000228044 Defa4P28311 92 aa9.8□□□□□ -0.84
Ldb3-208ENSMUST00000228044 Apoc4Q61268 124 aa9.79□□□□□ -0.84
Ldb3-208ENSMUST00000228044 Zcchc13Q9D548 170 aa9.79□□□□□ -0.84
Ldb3-208ENSMUST00000228044 Igkv2-109A0A075B5K6 120 aa9.78□□□□□ -0.84
Ldb3-208ENSMUST00000228044 Rps28P62858 69 aaKnown RBP9.78□□□□□ -0.84
Ldb3-208ENSMUST00000228044 U90926O08546 118 aa9.76□□□□□ -0.85
Ldb3-208ENSMUST00000228044 Defa23Q5G866 93 aa9.76□□□□□ -0.85
Ldb3-208ENSMUST00000228044 1700012A03RikQ9DAF1 130 aa9.76□□□□□ -0.85
Ldb3-208ENSMUST00000228044 Ifitm6A0A1B0GS75 124 aa9.75□□□□□ -0.85
Ldb3-208ENSMUST00000228044 PscaP57096 123 aa9.75□□□□□ -0.85
Ldb3-208ENSMUST00000228044 Znf414Q9DCK4 299 aa9.75□□□□□ -0.85
Ldb3-208ENSMUST00000228044 Dnah7aE9Q0T8 4024 aa9.74□□□□□ -0.85
Ldb3-208ENSMUST00000228044 Defa27F2Z403 93 aa9.74□□□□□ -0.85
Ldb3-208ENSMUST00000228044 Gm7102J3QQ10 178 aa9.72□□□□□ -0.85
Ldb3-208ENSMUST00000228044 Gm11011D3Z3L9 86 aa9.72□□□□□ -0.85
Ldb3-208ENSMUST00000228044 Gm10065F6TJM2 114 aa9.7□□□□□ -0.86
Ldb3-208ENSMUST00000228044 OxtP35454 125 aa9.7□□□□□ -0.86
Ldb3-208ENSMUST00000228044 Xcl1P47993 114 aa9.7□□□□□ -0.86
Ldb3-208ENSMUST00000228044 Defb37Q7TMD2 62 aa9.7□□□□□ -0.86
Ldb3-208ENSMUST00000228044 Igkv8-26A0A075B5N5 123 aa9.69□□□□□ -0.86
Ldb3-208ENSMUST00000228044 Ighv2-2A0A075B5P8 116 aa9.69□□□□□ -0.86
Ldb3-208ENSMUST00000228044 Ighv10-3A0A075B5T6 119 aa9.69□□□□□ -0.86
Ldb3-208ENSMUST00000228044 Ighv2-5A0A0A6YY69 116 aa9.69□□□□□ -0.86
Ldb3-208ENSMUST00000228044 Fam104aA2A6P4 185 aa9.69□□□□□ -0.86
Ldb3-208ENSMUST00000228044 P01821 116 aa9.69□□□□□ -0.86
Ldb3-208ENSMUST00000228044 Dnah7cA0A087WR13 4024 aa9.68□□□□□ -0.86
Ldb3-208ENSMUST00000228044 Igkv1-122A0A140T8M9 119 aa9.68□□□□□ -0.86
Ldb3-208ENSMUST00000228044 ScxQ64124 207 aa9.68□□□□□ -0.86
Ldb3-208ENSMUST00000228044 9530003J23RikQ8BM26 151 aa9.67□□□□□ -0.86
Ldb3-208ENSMUST00000228044 Trav14d-3-dv8A0A075B619 120 aa9.66□□□□□ -0.86
Ldb3-208ENSMUST00000228044 Krtap29-1A2A5X4 342 aa9.65□□□□□ -0.86
Ldb3-208ENSMUST00000228044 Phf5aP83870 110 aaKnown RBP9.65□□□□□ -0.86
Ldb3-208ENSMUST00000228044 Lamtor3O88653 124 aa9.64□□□□□ -0.87
Ldb3-208ENSMUST00000228044 A930002H24RikQ8C8Y3 163 aa9.64□□□□□ -0.87
Ldb3-208ENSMUST00000228044 Igkv8-27A0A0G2JF28 120 aa9.64□□□□□ -0.87
Ldb3-208ENSMUST00000228044 Igkv8-30A0A140T8M3 121 aa9.64□□□□□ -0.87
Ldb3-208ENSMUST00000228044 Tmem243B2RVB9 118 aa9.64□□□□□ -0.87
Ldb3-208ENSMUST00000228044 Defb9Q8R2I6 67 aa9.64□□□□□ -0.87
Ldb3-208ENSMUST00000228044 Krtap10-4Q08EG8 221 aa9.63□□□□□ -0.87
Ldb3-208ENSMUST00000228044 Smlr1J3QMJ4 66 aa9.61□□□□□ -0.87
Ldb3-208ENSMUST00000228044 Gm17521F6QAC8 156 aa9.6□□□□□ -0.87
Ldb3-208ENSMUST00000228044 H2al1aQ5M8Q2 105 aa9.6□□□□□ -0.87
Ldb3-208ENSMUST00000228044 Ube2bP63147 152 aa9.59□□□□□ -0.87
Ldb3-208ENSMUST00000228044 Hist1h4aP62806 103 aaKnown RBP9.59□□□□□ -0.87
Ldb3-208ENSMUST00000228044 Defa25Q5G864 92 aa9.59□□□□□ -0.87
Ldb3-208ENSMUST00000228044 A0A286YE02 88 aa9.58□□□□□ -0.88
Ldb3-208ENSMUST00000228044 Defa7P50705 93 aa9.58□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 117.1 ms