RNA–Protein interactions for RNA: ENSMUST00000106961.1

Cdc27-202, Transcript of Cell division cycle protein 27 homolog, mousemouse

TSL 1 (best) BASIC

Gene Cdc27, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc27-202ENSMUST00000106961 Gm10770F7D043 238 aa10.78□□□□□ -0.68
Cdc27-202ENSMUST00000106961 5730596B20RikQ8BQ08 205 aa10.78□□□□□ -0.68
Cdc27-202ENSMUST00000106961 2310061N02RikQ9D6S9 174 aa10.78□□□□□ -0.68
Cdc27-202ENSMUST00000106961 Cby1Q9D1C2 127 aa10.77□□□□□ -0.69
Cdc27-202ENSMUST00000106961 Rpl39lQ9CQD0 51 aa10.76□□□□□ -0.69
Cdc27-202ENSMUST00000106961 A0A286YCN5 57 aa10.76□□□□□ -0.69
Cdc27-202ENSMUST00000106961 Sprr1aQ62266 144 aa10.76□□□□□ -0.69
Cdc27-202ENSMUST00000106961 Znf414Q9DCK4 299 aa10.75□□□□□ -0.69
Cdc27-202ENSMUST00000106961 Ighv10-1A0A0B4J1J6 119 aa10.74□□□□□ -0.69
Cdc27-202ENSMUST00000106961 Gm11627A6PWP4 55 aa10.73□□□□□ -0.69
Cdc27-202ENSMUST00000106961 BatfO35284 125 aa10.72□□□□□ -0.69
Cdc27-202ENSMUST00000106961 BC048502Q80Y74 154 aa10.72□□□□□ -0.69
Cdc27-202ENSMUST00000106961 Igkv3-12A0A140T8P0 119 aa10.72□□□□□ -0.69
Cdc27-202ENSMUST00000106961 Klk12B2RVZ0 247 aa10.72□□□□□ -0.69
Cdc27-202ENSMUST00000106961 Cdk2ap2Q9CPY4 127 aa10.72□□□□□ -0.69
Cdc27-202ENSMUST00000106961 Lyrm7Q9DA03 104 aa10.72□□□□□ -0.69
Cdc27-202ENSMUST00000106961 SacsQ9JLC8 4582 aa10.71□□□□□ -0.69
Cdc27-202ENSMUST00000106961 2310034G01RikA0A286YDL3 209 aa10.7□□□□□ -0.7
Cdc27-202ENSMUST00000106961 Defa20Q45VN2 95 aa10.7□□□□□ -0.7
Cdc27-202ENSMUST00000106961 Dnah2P0C6F1 4456 aa10.7□□□□□ -0.7
Cdc27-202ENSMUST00000106961 Gm10320E9PW43 113 aa10.7□□□□□ -0.7
Cdc27-202ENSMUST00000106961 Spata45Q9CVW4 97 aa10.7□□□□□ -0.7
Cdc27-202ENSMUST00000106961 Pkd1O08852 4293 aa10.69□□□□□ -0.7
Cdc27-202ENSMUST00000106961 Xcl1P47993 114 aa10.68□□□□□ -0.7
Cdc27-202ENSMUST00000106961 Defa16P50714 93 aa10.68□□□□□ -0.7
Cdc27-202ENSMUST00000106961 4930519P11RikQ9CUJ8 166 aa10.68□□□□□ -0.7
Cdc27-202ENSMUST00000106961 Igkv1-88A0A140T8N1 120 aa10.68□□□□□ -0.7
Cdc27-202ENSMUST00000106961 Gm10735Q3US96 136 aa10.68□□□□□ -0.7
Cdc27-202ENSMUST00000106961 BB014433Q8C5R5 389 aa10.68□□□□□ -0.7
Cdc27-202ENSMUST00000106961 Dnah9B1AR51 4484 aa10.67□□□□□ -0.7
Cdc27-202ENSMUST00000106961 Igkv4-58A0A0G2JGI6 119 aa10.66□□□□□ -0.7
Cdc27-202ENSMUST00000106961 Ifitm6A0A1B0GS75 124 aa10.66□□□□□ -0.7
Cdc27-202ENSMUST00000106961 Krtap10-4Q08EG8 221 aa10.65□□□□□ -0.7
Cdc27-202ENSMUST00000106961 Gm7276Q3TYW4 209 aa10.65□□□□□ -0.7
Cdc27-202ENSMUST00000106961 Elof1P60003 83 aa10.64□□□□□ -0.71
Cdc27-202ENSMUST00000106961 Pou2af1Q64693 256 aa10.64□□□□□ -0.71
Cdc27-202ENSMUST00000106961 BaalcQ8VHV1 145 aa10.64□□□□□ -0.71
Cdc27-202ENSMUST00000106961 Wfdc6bF6ULY1 148 aa10.63□□□□□ -0.71
Cdc27-202ENSMUST00000106961 Msrb1Q9JLC3 116 aa10.63□□□□□ -0.71
Cdc27-202ENSMUST00000106961 Defa1P11477 93 aa10.62□□□□□ -0.71
Cdc27-202ENSMUST00000106961 Cd164Q9R0L9 197 aa10.62□□□□□ -0.71
Cdc27-202ENSMUST00000106961 Trav14d-3-dv8A0A075B619 120 aa10.61□□□□□ -0.71
Cdc27-202ENSMUST00000106961 E130218I03RikA0A0U1RNU5 63 aa10.61□□□□□ -0.71
Cdc27-202ENSMUST00000106961 Prol1E9PYQ4 312 aa10.61□□□□□ -0.71
Cdc27-202ENSMUST00000106961 Igkv2-109A0A075B5K6 120 aa10.61□□□□□ -0.71
Cdc27-202ENSMUST00000106961 Ighv10-3A0A075B5T6 119 aa10.61□□□□□ -0.71
Cdc27-202ENSMUST00000106961 Q9DAA7 145 aa10.6□□□□□ -0.71
Cdc27-202ENSMUST00000106961 Defb40Q70KL2 73 aa10.59□□□□□ -0.71
Cdc27-202ENSMUST00000106961 Gm7102J3QQ10 178 aa10.59□□□□□ -0.71
Cdc27-202ENSMUST00000106961 Tmem213Q08EA8 116 aa10.59□□□□□ -0.71
Cdc27-202ENSMUST00000106961 Dmac1Q9CQ00 111 aa10.59□□□□□ -0.71
Cdc27-202ENSMUST00000106961 Dnah11E9Q7N9 4488 aa10.58□□□□□ -0.72
Cdc27-202ENSMUST00000106961 Igkv8-26A0A075B5N5 123 aa10.58□□□□□ -0.72
Cdc27-202ENSMUST00000106961 P84750 121 aa10.58□□□□□ -0.72
Cdc27-202ENSMUST00000106961 Dync1h1Q9JHU4 4644 aaKnown RBP10.58□□□□□ -0.72
Cdc27-202ENSMUST00000106961 Obox2E9PXV9 151 aa10.57□□□□□ -0.72
Cdc27-202ENSMUST00000106961 Smim29Q8R043 75 aa10.55□□□□□ -0.72
Cdc27-202ENSMUST00000106961 Dnah5Q8VHE6 4621 aa10.55□□□□□ -0.72
Cdc27-202ENSMUST00000106961 Ntn5Q3UQ22 452 aa10.55□□□□□ -0.72
Cdc27-202ENSMUST00000106961 Fam168bQ80XQ8 194 aa10.55□□□□□ -0.72
Cdc27-202ENSMUST00000106961 Igkv3-2A0A075B5P0 119 aa10.54□□□□□ -0.72
Cdc27-202ENSMUST00000106961 9530003J23RikQ8BM26 151 aa10.54□□□□□ -0.72
Cdc27-202ENSMUST00000106961 Igkv8-27A0A0G2JF28 120 aa10.51□□□□□ -0.73
Cdc27-202ENSMUST00000106961 Igkv8-30A0A140T8M3 121 aa10.51□□□□□ -0.73
Cdc27-202ENSMUST00000106961 Fam19a1Q7TPG8 133 aa10.51□□□□□ -0.73
Cdc27-202ENSMUST00000106961 Inafm2A0A1L1STD6 152 aa10.51□□□□□ -0.73
Cdc27-202ENSMUST00000106961 Gm10837Q3UTT8 145 aa10.51□□□□□ -0.73
Cdc27-202ENSMUST00000106961 Gm2696A0A1W2P709 240 aa10.5□□□□□ -0.73
Cdc27-202ENSMUST00000106961 Lamtor3O88653 124 aa10.5□□□□□ -0.73
Cdc27-202ENSMUST00000106961 SycnQ8VCK7 134 aa10.5□□□□□ -0.73
Cdc27-202ENSMUST00000106961 Fat1A0A1L1SQU7 4645 aa10.5□□□□□ -0.73
Cdc27-202ENSMUST00000106961 Gm28374F6SG70 93 aa10.49□□□□□ -0.73
Cdc27-202ENSMUST00000106961 Atp5eP56382 52 aa10.49□□□□□ -0.73
Cdc27-202ENSMUST00000106961 Defa4P28311 92 aa10.49□□□□□ -0.73
Cdc27-202ENSMUST00000106961 Nupr2Q497P3 102 aa10.49□□□□□ -0.73
Cdc27-202ENSMUST00000106961 Fam19a5Q91WE9 132 aa10.49□□□□□ -0.73
Cdc27-202ENSMUST00000106961 Zcchc13Q9D548 170 aa10.49□□□□□ -0.73
Cdc27-202ENSMUST00000106961 Gm11011D3Z3L9 86 aa10.47□□□□□ -0.73
Cdc27-202ENSMUST00000106961 PkigO70139 76 aa10.46□□□□□ -0.74
Cdc27-202ENSMUST00000106961 Anapc13Q8R034 74 aa10.46□□□□□ -0.74
Cdc27-202ENSMUST00000106961 Ighv2-5A0A0A6YY69 116 aa10.45□□□□□ -0.74
Cdc27-202ENSMUST00000106961 Pde6gP09174 87 aa10.45□□□□□ -0.74
Cdc27-202ENSMUST00000106961 Defb37Q7TMD2 62 aa10.45□□□□□ -0.74
Cdc27-202ENSMUST00000106961 Ormdl1Q921I0 153 aa10.45□□□□□ -0.74
Cdc27-202ENSMUST00000106961 A930002H24RikQ8C8Y3 163 aa10.44□□□□□ -0.74
Cdc27-202ENSMUST00000106961 Fam104aA2A6P4 185 aa10.44□□□□□ -0.74
Cdc27-202ENSMUST00000106961 Igkv1-122A0A140T8M9 119 aa10.43□□□□□ -0.74
Cdc27-202ENSMUST00000106961 Tmem243B2RVB9 118 aa10.42□□□□□ -0.74
Cdc27-202ENSMUST00000106961 Herc2Q4U2R1 4836 aa10.41□□□□□ -0.74
Cdc27-202ENSMUST00000106961 U90926O08546 118 aa10.41□□□□□ -0.74
Cdc27-202ENSMUST00000106961 Rbm3O89086 153 aaKnown RBP10.41□□□□□ -0.74
Cdc27-202ENSMUST00000106961 Birc6O88738 4882 aa10.4□□□□□ -0.74
Cdc27-202ENSMUST00000106961 Gm10308Q9CVR5 141 aa10.4□□□□□ -0.74
Cdc27-202ENSMUST00000106961 Vpreb2P13373 142 aa10.4□□□□□ -0.75
Cdc27-202ENSMUST00000106961 A730071L15RikQ8C4X0 137 aa10.4□□□□□ -0.75
Cdc27-202ENSMUST00000106961 Pkhd1E9PZ36 4059 aa10.39□□□□□ -0.75
Cdc27-202ENSMUST00000106961 Defa23Q5G866 93 aa10.38□□□□□ -0.75
Cdc27-202ENSMUST00000106961 1700012A03RikQ9DAF1 130 aa10.38□□□□□ -0.75
Cdc27-202ENSMUST00000106961 Ighv2-2A0A075B5P8 116 aa10.36□□□□□ -0.75
Cdc27-202ENSMUST00000106961 Igkv8-21A0A140T8P7 120 aa10.36□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms