RNA–Protein interactions for RNA: ENSMUST00000068411.4

Ccdc88c-201, Transcript of Protein Daple, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc88c, Length 7,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-201ENSMUST00000068411 7530416G11RikJ3QJX6 159 aa8.53□□□□□ -1.04
Ccdc88c-201ENSMUST00000068411 SetxA2AKX3 2646 aa8.53□□□□□ -1.04
Ccdc88c-201ENSMUST00000068411 Mp68P56379 58 aa8.52□□□□□ -1.05
Ccdc88c-201ENSMUST00000068411 Krtap16-1A2A5X5 502 aa8.51□□□□□ -1.05
Ccdc88c-201ENSMUST00000068411 Ighv2-2A0A075B5P8 116 aa8.5□□□□□ -1.05
Ccdc88c-201ENSMUST00000068411 P01821 116 aa8.5□□□□□ -1.05
Ccdc88c-201ENSMUST00000068411 Gm10772F7AIG4 85 aa8.49□□□□□ -1.05
Ccdc88c-201ENSMUST00000068411 4930507D05RikQ8C9C9 103 aa8.49□□□□□ -1.05
Ccdc88c-201ENSMUST00000068411 Epg5Q80TA9 2572 aa8.48□□□□□ -1.05
Ccdc88c-201ENSMUST00000068411 Krtap11-1E9Q2E9 183 aa8.48□□□□□ -1.05
Ccdc88c-201ENSMUST00000068411 Prr13Q9CQJ5 137 aa8.47□□□□□ -1.05
Ccdc88c-201ENSMUST00000068411 Rnase13Q5GAM7 153 aa8.47□□□□□ -1.05
Ccdc88c-201ENSMUST00000068411 Usp9yF8VPU6 2556 aa8.46□□□□□ -1.06
Ccdc88c-201ENSMUST00000068411 Limd2Q8BGB5 128 aa8.45□□□□□ -1.06
Ccdc88c-201ENSMUST00000068411 Col5a1O88207 1838 aa8.45□□□□□ -1.06
Ccdc88c-201ENSMUST00000068411 Coa5Q99M07 74 aa8.44□□□□□ -1.06
Ccdc88c-201ENSMUST00000068411 Gm42715A0A087WP63 3095 aaKnown RBP8.44□□□□□ -1.06
Ccdc88c-201ENSMUST00000068411 Gm26661M0QWV4 156 aa8.44□□□□□ -1.06
Ccdc88c-201ENSMUST00000068411 Gm27235Q3UW50 83 aa8.43□□□□□ -1.06
Ccdc88c-201ENSMUST00000068411 Eif4ebp3Q80VV3 101 aa8.43□□□□□ -1.06
Ccdc88c-201ENSMUST00000068411 Cep192E9Q4Y4 2514 aaKnown RBP8.43□□□□□ -1.06
Ccdc88c-201ENSMUST00000068411 Jbts17Q8CE72 3214 aa8.43□□□□□ -1.06
Ccdc88c-201ENSMUST00000068411 Gm3233E9Q2H5 230 aa8.43□□□□□ -1.06
Ccdc88c-201ENSMUST00000068411 Gm10308Q9CVR5 141 aa8.41□□□□□ -1.06
Ccdc88c-201ENSMUST00000068411 CicQ924A2 2510 aa8.41□□□□□ -1.06
Ccdc88c-201ENSMUST00000068411 Rps28P62858 69 aaKnown RBP8.41□□□□□ -1.06
Ccdc88c-201ENSMUST00000068411 Nbeal1E9PYP2 2688 aa8.39□□□□□ -1.07
Ccdc88c-201ENSMUST00000068411 Ep400Q8CHI8 3072 aaKnown RBP8.39□□□□□ -1.07
Ccdc88c-201ENSMUST00000068411 Anapc11Q9CPX9 84 aa8.38□□□□□ -1.07
Ccdc88c-201ENSMUST00000068411 Cdc42se1Q8BHL7 80 aa8.37□□□□□ -1.07
Ccdc88c-201ENSMUST00000068411 Abca12E9Q876 2595 aa8.35□□□□□ -1.07
Ccdc88c-201ENSMUST00000068411 Sprr4Q8CGN8 76 aa8.33□□□□□ -1.08
Ccdc88c-201ENSMUST00000068411 A330070K13RikQ8CA53 115 aa8.33□□□□□ -1.08
Ccdc88c-201ENSMUST00000068411 Gm20538F6Z9R1 75 aa8.32□□□□□ -1.08
Ccdc88c-201ENSMUST00000068411 Spata3Q9D9T6 193 aa8.32□□□□□ -1.08
Ccdc88c-201ENSMUST00000068411 AY074887Q8R5F9 132 aa8.3□□□□□ -1.08
Ccdc88c-201ENSMUST00000068411 Unc79Q0KK59 2596 aa8.3□□□□□ -1.08
Ccdc88c-201ENSMUST00000068411 Plac8Q9JI48 112 aa8.29□□□□□ -1.08
Ccdc88c-201ENSMUST00000068411 Krtap26-1Q9D7N2 215 aa8.29□□□□□ -1.08
Ccdc88c-201ENSMUST00000068411 Defb9Q8R2I6 67 aa8.29□□□□□ -1.08
Ccdc88c-201ENSMUST00000068411 UtrnE9Q6R7 3430 aa8.27□□□□□ -1.08
Ccdc88c-201ENSMUST00000068411 C530025M09RikF6RGA8 229 aa8.26□□□□□ -1.09
Ccdc88c-201ENSMUST00000068411 Myo18bE9PV66 2605 aa8.26□□□□□ -1.09
Ccdc88c-201ENSMUST00000068411 Dnah12Q3V0Q1 3086 aa8.25□□□□□ -1.09
Ccdc88c-201ENSMUST00000068411 Sprr1bQ62267 153 aa8.24□□□□□ -1.09
Ccdc88c-201ENSMUST00000068411 Phxr4P15974 95 aa8.24□□□□□ -1.09
Ccdc88c-201ENSMUST00000068411 Psors1c2Q80ZC9 134 aa8.24□□□□□ -1.09
Ccdc88c-201ENSMUST00000068411 Gm7137J3QMW1 236 aa8.24□□□□□ -1.09
Ccdc88c-201ENSMUST00000068411 Usp24B1AY13 2617 aaKnown RBP8.23□□□□□ -1.09
Ccdc88c-201ENSMUST00000068411 Cypt15B1AXS0 87 aa8.23□□□□□ -1.09
Ccdc88c-201ENSMUST00000068411 Gm7138L7N2C3 230 aa8.22□□□□□ -1.09
Ccdc88c-201ENSMUST00000068411 Gm3238W4VSP7 230 aa8.22□□□□□ -1.09
Ccdc88c-201ENSMUST00000068411 Spink7Q6IE32 76 aa8.22□□□□□ -1.09
Ccdc88c-201ENSMUST00000068411 Lypd5Q9D7Z7 256 aa8.21□□□□□ -1.1
Ccdc88c-201ENSMUST00000068411 Fam229bQ8CF36 80 aa8.2□□□□□ -1.1
Ccdc88c-201ENSMUST00000068411 TrioQ0KL02 3102 aa8.19□□□□□ -1.1
Ccdc88c-201ENSMUST00000068411 Ankrd17Q99NH0 2603 aaKnown RBP8.19□□□□□ -1.1
Ccdc88c-201ENSMUST00000068411 Zfp292Q9Z2U2 2698 aa8.19□□□□□ -1.1
Ccdc88c-201ENSMUST00000068411 Prune2Q52KR3 3084 aa8.19□□□□□ -1.1
Ccdc88c-201ENSMUST00000068411 Chtf8P0CG14 533 aa8.17□□□□□ -1.1
Ccdc88c-201ENSMUST00000068411 PcntP48725 2898 aa8.17□□□□□ -1.1
Ccdc88c-201ENSMUST00000068411 Dmbt1Q60997 2085 aa8.16□□□□□ -1.1
Ccdc88c-201ENSMUST00000068411 Uqcr11Q9CPX8 56 aa8.16□□□□□ -1.1
Ccdc88c-201ENSMUST00000068411 Cep350E9Q309 3095 aa8.15□□□□□ -1.11
Ccdc88c-201ENSMUST00000068411 Ankrd11E9Q4F7 2643 aa8.14□□□□□ -1.11
Ccdc88c-201ENSMUST00000068411 Nsd1O88491 2588 aaKnown RBP8.14□□□□□ -1.11
Ccdc88c-201ENSMUST00000068411 Gm7276Q3TYW4 209 aa8.14□□□□□ -1.11
Ccdc88c-201ENSMUST00000068411 Lama3Q61789 3330 aa8.13□□□□□ -1.11
Ccdc88c-201ENSMUST00000068411 Smim29Q8R043 75 aa8.13□□□□□ -1.11
Ccdc88c-201ENSMUST00000068411 HrnrQ8VHD8 2496 aa8.11□□□□□ -1.11
Ccdc88c-201ENSMUST00000068411 CenpfE9Q3P4 2997 aaKnown RBP8.11□□□□□ -1.11
Ccdc88c-201ENSMUST00000068411 OxtP35454 125 aa8.1□□□□□ -1.11
Ccdc88c-201ENSMUST00000068411 2310034C09RikQ9D746 214 aa8.09□□□□□ -1.11
Ccdc88c-201ENSMUST00000068411 Gm3880A0A1B0GSB3 72 aa8.08□□□□□ -1.12
Ccdc88c-201ENSMUST00000068411 FasnP19096 2504 aaKnown RBP8.07□□□□□ -1.12
Ccdc88c-201ENSMUST00000068411 Gm11213A0A1B0GR83 88 aa8.07□□□□□ -1.12
Ccdc88c-201ENSMUST00000068411 Gm21798J3QNU5 87 aa8.06□□□□□ -1.12
Ccdc88c-201ENSMUST00000068411 Gm9821Q8K076 103 aa8.06□□□□□ -1.12
Ccdc88c-201ENSMUST00000068411 Gm26620Q9CY65 116 aa8.05□□□□□ -1.12
Ccdc88c-201ENSMUST00000068411 CriptO70333 101 aa8.05□□□□□ -1.12
Ccdc88c-201ENSMUST00000068411 AtrQ9JKK8 2635 aa8.03□□□□□ -1.12
Ccdc88c-201ENSMUST00000068411 AW011738F6S7Q2 159 aa8.02□□□□□ -1.13
Ccdc88c-201ENSMUST00000068411 Fam104aA2A6P4 185 aa8.01□□□□□ -1.13
Ccdc88c-201ENSMUST00000068411 Bod1lE9Q6J5 3032 aa8.01□□□□□ -1.13
Ccdc88c-201ENSMUST00000068411 CnbpP53996 178 aaKnown RBP8□□□□□ -1.13
Ccdc88c-201ENSMUST00000068411 Lelp1Q9DAE3 120 aa8□□□□□ -1.13
Ccdc88c-201ENSMUST00000068411 FlnbQ80X90 2602 aaKnown RBP8□□□□□ -1.13
Ccdc88c-201ENSMUST00000068411 Gm9508A0A1W2P7W0 230 aa8□□□□□ -1.13
Ccdc88c-201ENSMUST00000068411 Fn1P11276 2477 aaKnown RBP7.99□□□□□ -1.13
Ccdc88c-201ENSMUST00000068411 6030445D17RikE9Q8F9 148 aa7.98□□□□□ -1.13
Ccdc88c-201ENSMUST00000068411 Krtap15-1Q9QZU5 150 aa7.96□□□□□ -1.13
Ccdc88c-201ENSMUST00000068411 Gm10643Q3URG9 111 aa7.96□□□□□ -1.14
Ccdc88c-201ENSMUST00000068411 Zcchc13Q9D548 170 aa7.95□□□□□ -1.14
Ccdc88c-201ENSMUST00000068411 Prrc2cQ3TLH4 2846 aaKnown RBP7.94□□□□□ -1.14
Ccdc88c-201ENSMUST00000068411 Gcn1E9PVA8 2671 aaKnown RBP7.92□□□□□ -1.14
Ccdc88c-201ENSMUST00000068411 Gm10320E9PW43 113 aa7.91□□□□□ -1.14
Ccdc88c-201ENSMUST00000068411 Gm4491E0CX42 125 aa7.91□□□□□ -1.14
Ccdc88c-201ENSMUST00000068411 Cypt14J3QPF7 87 aa7.89□□□□□ -1.15
Ccdc88c-201ENSMUST00000068411 FlnaQ8BTM8 2647 aaKnown RBP7.87□□□□□ -1.15
Ccdc88c-201ENSMUST00000068411 Lama2Q60675 3118 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 72.6 ms