RNA–Protein interactions for RNA: ENSMUST00000068411.4

Ccdc88c-201, Transcript of Protein Daple, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc88c, Length 7,542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-201ENSMUST00000068411 Rhox8Q6VSS7 320 aa22.4■■□□□ 1.18
Ccdc88c-201ENSMUST00000068411 Ehmt2Q9Z148 1263 aaKnown RBP20.68■□□□□ 0.9
Ccdc88c-201ENSMUST00000068411 Rpgrip1Q9EPQ2 1331 aa20.12■□□□□ 0.81
Ccdc88c-201ENSMUST00000068411 Wdr66E9Q743 1299 aa19.97■□□□□ 0.79
Ccdc88c-201ENSMUST00000068411 Ccdc136Q3TVA9 1136 aa19.85■□□□□ 0.77
Ccdc88c-201ENSMUST00000068411 Ube2uB1AUC4 352 aa19.79■□□□□ 0.76
Ccdc88c-201ENSMUST00000068411 Zeb1Q64318 1117 aa19.77■□□□□ 0.76
Ccdc88c-201ENSMUST00000068411 Cngb1E1AZ71 1325 aa19.75■□□□□ 0.75
Ccdc88c-201ENSMUST00000068411 Las1lA2BE28 776 aaKnown RBP19.7■□□□□ 0.74
Ccdc88c-201ENSMUST00000068411 Esf1Q3V1V3 845 aaKnown RBP19.69■□□□□ 0.74
Ccdc88c-201ENSMUST00000068411 Gab3Q8BSM5 595 aa19.64■□□□□ 0.73
Ccdc88c-201ENSMUST00000068411 Pelp1Q9DBD5 1123 aaKnown RBP19.42■□□□□ 0.7
Ccdc88c-201ENSMUST00000068411 Npm2Q80W85 207 aa19.34■□□□□ 0.69
Ccdc88c-201ENSMUST00000068411 Myt1lP97500 1187 aa19.33■□□□□ 0.68
Ccdc88c-201ENSMUST00000068411 Amer1Q7TS75 1132 aa19.17■□□□□ 0.66
Ccdc88c-201ENSMUST00000068411 Trim41Q5NCC3 630 aa19.11■□□□□ 0.65
Ccdc88c-201ENSMUST00000068411 Slc24a1Q91WD8 1130 aa19.04■□□□□ 0.64
Ccdc88c-201ENSMUST00000068411 UbtfP25976 765 aaKnown RBP18.94■□□□□ 0.62
Ccdc88c-201ENSMUST00000068411 CenpbP27790 599 aa18.85■□□□□ 0.61
Ccdc88c-201ENSMUST00000068411 Ttbk1Q6PCN3 1308 aa18.71■□□□□ 0.59
Ccdc88c-201ENSMUST00000068411 Acin1Q9JIX8 1338 aaKnown RBP18.69■□□□□ 0.58
Ccdc88c-201ENSMUST00000068411 NefmP08553 848 aa18.56■□□□□ 0.56
Ccdc88c-201ENSMUST00000068411 Ppargc1bQ8VHJ7 1014 aa18.54■□□□□ 0.56
Ccdc88c-201ENSMUST00000068411 Stra8P70278 393 aa18.51■□□□□ 0.55
Ccdc88c-201ENSMUST00000068411 Il27Q8K3I6 234 aa18.51■□□□□ 0.55
Ccdc88c-201ENSMUST00000068411 Neurod1Q60867 357 aa18.46■□□□□ 0.55
Ccdc88c-201ENSMUST00000068411 Ap3b1Q9Z1T1 1105 aa18.41■□□□□ 0.54
Ccdc88c-201ENSMUST00000068411 Cdk11bP24788 784 aaKnown RBP18.37■□□□□ 0.53
Ccdc88c-201ENSMUST00000068411 Eif5bQ05D44 1216 aaKnown RBP18.37■□□□□ 0.53
Ccdc88c-201ENSMUST00000068411 NischQ80TM9 1593 aa18.35■□□□□ 0.53
Ccdc88c-201ENSMUST00000068411 4933416C03RikQ3V063 378 aa18.34■□□□□ 0.53
Ccdc88c-201ENSMUST00000068411 Fam50aQ9WV03 339 aaKnown RBP18.32■□□□□ 0.52
Ccdc88c-201ENSMUST00000068411 Pcgf6Q99NA9 353 aa18.26■□□□□ 0.51
Ccdc88c-201ENSMUST00000068411 NrdcQ8BHG1 1161 aa18.23■□□□□ 0.51
Ccdc88c-201ENSMUST00000068411 NclP09405 707 aaKnown RBP18.22■□□□□ 0.51
Ccdc88c-201ENSMUST00000068411 4930567H17RikQ3V0K5 233 aa18.2■□□□□ 0.5
Ccdc88c-201ENSMUST00000068411 Os9Q8K2C7 672 aa18.19■□□□□ 0.5
Ccdc88c-201ENSMUST00000068411 Nop58Q6DFW4 536 aaKnown RBP18.17■□□□□ 0.5
Ccdc88c-201ENSMUST00000068411 NeflP08551 543 aa18.1■□□□□ 0.49
Ccdc88c-201ENSMUST00000068411 HrcG5E8J6 738 aa18.07■□□□□ 0.48
Ccdc88c-201ENSMUST00000068411 Anp32bQ9EST5 272 aaKnown RBP18.06■□□□□ 0.48
Ccdc88c-201ENSMUST00000068411 Zbtb7cQ8VCZ7 619 aa18.04■□□□□ 0.48
Ccdc88c-201ENSMUST00000068411 Supt5hO55201 1082 aaKnown RBP18.03■□□□□ 0.48
Ccdc88c-201ENSMUST00000068411 Chic1Q8CBW7 227 aa18.03■□□□□ 0.48
Ccdc88c-201ENSMUST00000068411 Tnnt3Q9QZ47 272 aa17.95■□□□□ 0.46
Ccdc88c-201ENSMUST00000068411 Ifnlr1Q8CGK5 535 aa17.93■□□□□ 0.46
Ccdc88c-201ENSMUST00000068411 Ccdc180J3QNE4 1664 aa17.91■□□□□ 0.46
Ccdc88c-201ENSMUST00000068411 Plppr3Q7TPB0 716 aa17.91■□□□□ 0.46
Ccdc88c-201ENSMUST00000068411 TonslQ6NZL6 1363 aa17.87■□□□□ 0.45
Ccdc88c-201ENSMUST00000068411 Zbtb4Q5F293 982 aa17.82■□□□□ 0.44
Ccdc88c-201ENSMUST00000068411 Gm13697A2AK42 830 aa17.77■□□□□ 0.43
Ccdc88c-201ENSMUST00000068411 Mier1Q5UAK0 511 aa17.76■□□□□ 0.43
Ccdc88c-201ENSMUST00000068411 Zcchc6Q5BLK4 1491 aaKnown RBP17.76■□□□□ 0.43
Ccdc88c-201ENSMUST00000068411 Lmod2Q3UHZ5 550 aa17.74■□□□□ 0.43
Ccdc88c-201ENSMUST00000068411 Mapk8ip2Q9ERE9 830 aa17.74■□□□□ 0.43
Ccdc88c-201ENSMUST00000068411 Prdm10Q3UTQ7 1184 aa17.72■□□□□ 0.43
Ccdc88c-201ENSMUST00000068411 Hnrnpul2Q00PI9 745 aaKnown RBP17.7■□□□□ 0.42
Ccdc88c-201ENSMUST00000068411 Myt1Q8CFC2 1127 aa17.69■□□□□ 0.42
Ccdc88c-201ENSMUST00000068411 Gm35339A0A140LHH9 1649 aa17.66■□□□□ 0.42
Ccdc88c-201ENSMUST00000068411 Gm38655A0A286YDK6 273 aa17.66■□□□□ 0.42
Ccdc88c-201ENSMUST00000068411 Plekhg3Q4VAC9 1341 aa17.64■□□□□ 0.41
Ccdc88c-201ENSMUST00000068411 ArxO35085 564 aa17.61■□□□□ 0.41
Ccdc88c-201ENSMUST00000068411 DaxxO35613 739 aa17.6■□□□□ 0.41
Ccdc88c-201ENSMUST00000068411 Atp1b4Q99ME6 356 aa17.6■□□□□ 0.41
Ccdc88c-201ENSMUST00000068411 Abcc9P70170 1546 aa17.57■□□□□ 0.4
Ccdc88c-201ENSMUST00000068411 Polr3glQ8R0C0 218 aa17.55■□□□□ 0.4
Ccdc88c-201ENSMUST00000068411 Erich6D3Z6S9 713 aa17.54■□□□□ 0.4
Ccdc88c-201ENSMUST00000068411 Rtl1Q7M732 1744 aa17.5■□□□□ 0.39
Ccdc88c-201ENSMUST00000068411 Csrnp3P59055 597 aa17.47■□□□□ 0.39
Ccdc88c-201ENSMUST00000068411 Eid3Q3V124 375 aa17.46■□□□□ 0.39
Ccdc88c-201ENSMUST00000068411 Nlrp6Q91WS2 869 aa17.45■□□□□ 0.38
Ccdc88c-201ENSMUST00000068411 Rtl5Q5DTT4 599 aa17.43■□□□□ 0.38
Ccdc88c-201ENSMUST00000068411 Rangap1P46061 589 aaKnown RBP17.42■□□□□ 0.38
Ccdc88c-201ENSMUST00000068411 Anp32aO35381 247 aa17.4■□□□□ 0.38
Ccdc88c-201ENSMUST00000068411 ClspnQ80YR7 1315 aa17.39■□□□□ 0.37
Ccdc88c-201ENSMUST00000068411 Gm13695A2AK44 830 aa17.39■□□□□ 0.37
Ccdc88c-201ENSMUST00000068411 Npm1Q61937 292 aaKnown RBP17.37■□□□□ 0.37
Ccdc88c-201ENSMUST00000068411 Fkbp15Q6P9Q6 1216 aaKnown RBP17.35■□□□□ 0.37
Ccdc88c-201ENSMUST00000068411 DiexfQ8BTT6 772 aaKnown RBP17.32■□□□□ 0.36
Ccdc88c-201ENSMUST00000068411 Sall2Q9QX96 1004 aa17.21■□□□□ 0.35
Ccdc88c-201ENSMUST00000068411 Ythdc1E9Q5K9 736 aaKnown RBP17.17■□□□□ 0.34
Ccdc88c-201ENSMUST00000068411 Rad21Q61550 635 aaKnown RBP17.16■□□□□ 0.34
Ccdc88c-201ENSMUST00000068411 Ppp4r2Q0VGB7 417 aa17.14■□□□□ 0.33
Ccdc88c-201ENSMUST00000068411 Vsig10D3YX43 558 aa17.07■□□□□ 0.32
Ccdc88c-201ENSMUST00000068411 CatipB9EKE5 520 aa17.05■□□□□ 0.32
Ccdc88c-201ENSMUST00000068411 Lmod3E9QA62 571 aa17.04■□□□□ 0.32
Ccdc88c-201ENSMUST00000068411 Calr4Q3TQS0 420 aa17.03■□□□□ 0.32
Ccdc88c-201ENSMUST00000068411 Chic2Q9D9G3 165 aa17.02■□□□□ 0.32
Ccdc88c-201ENSMUST00000068411 Clip1Q922J3 1391 aa17■□□□□ 0.31
Ccdc88c-201ENSMUST00000068411 Anks4bQ8K3X6 423 aa16.97■□□□□ 0.31
Ccdc88c-201ENSMUST00000068411 Trim26Q99PN3 545 aa16.96■□□□□ 0.31
Ccdc88c-201ENSMUST00000068411 Irx6Q9ER75 438 aa16.95■□□□□ 0.3
Ccdc88c-201ENSMUST00000068411 Upf2A2AT37 1269 aaKnown RBP16.95■□□□□ 0.3
Ccdc88c-201ENSMUST00000068411 DekQ7TNV0 380 aaKnown RBP16.94■□□□□ 0.3
Ccdc88c-201ENSMUST00000068411 Mrs2Q5NCE8 434 aa16.9■□□□□ 0.3
Ccdc88c-201ENSMUST00000068411 Safb2Q80YR5 991 aaKnown RBP16.9■□□□□ 0.3
Ccdc88c-201ENSMUST00000068411 Arid4bA2CG63 1314 aaKnown RBP16.85■□□□□ 0.29
Ccdc88c-201ENSMUST00000068411 P3h3Q8CG70 732 aa16.85■□□□□ 0.29
Ccdc88c-201ENSMUST00000068411 Wdr43Q6ZQL4 677 aaKnown RBP16.83■□□□□ 0.29
Ccdc88c-201ENSMUST00000068411 Hsp90aa1P07901 733 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms