RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Ndufc1Q9CQY9 76 aa5.65□□□□□ -1.5
Cdc40-201ENSMUST00000044166 1700074P13RikQ9D9G7 251 aa5.65□□□□□ -1.5
Cdc40-201ENSMUST00000044166 SptssbQ925E8 76 aa5.65□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Igkv8-27A0A0G2JF28 120 aa5.64□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Igkv8-30A0A140T8M3 121 aa5.64□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Sfta2E9PXB6 77 aa5.64□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Brwd1Q921C3 2304 aa5.63□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Prr15lQ8JZM2 100 aa5.63□□□□□ -1.51
Cdc40-201ENSMUST00000044166 2010109I03RikQ9CQ11 111 aa5.63□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Ighv2-5A0A0A6YY69 116 aa5.62□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Obox2E9PXV9 151 aa5.62□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Psors1c2Q80ZC9 134 aa5.62□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Ndufs5Q99LY9 106 aa5.62□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Ighv10-1A0A0B4J1J6 119 aa5.62□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Gm10518F6UQQ9 182 aa5.62□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Cox7bP56393 80 aa5.62□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Ube2aQ9Z255 152 aa5.62□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Igkv3-1A0A075B5P1 119 aa5.62□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Igkv4-58A0A0G2JGI6 119 aa5.61□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Gm3646F6S692 53 aa5.61□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Prh1P05142 261 aa5.61□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Gm10320E9PW43 113 aa5.61□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Znf706Q9D115 76 aaKnown RBP5.61□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Epg5Q80TA9 2572 aa5.61□□□□□ -1.51
Cdc40-201ENSMUST00000044166 CubnQ9JLB4 3623 aa5.61□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Hivep3A2A884 2348 aa5.61□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Igkv8-16A0A0G2JDG9 121 aa5.61□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Klk9Q32M27 251 aa5.61□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Gm9805F6YK59 57 aa5.6□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Q8BT88 171 aa5.6□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Reg3dQ9QUS9 175 aa5.6□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Reg3bP35230 175 aa5.6□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Tcl1b5P56845 121 aa5.6□□□□□ -1.51
Cdc40-201ENSMUST00000044166 PrcdQ00LT2 53 aa5.6□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Defb26Q30KN7 186 aa5.6□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Pde6gP09174 87 aa5.59□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Ccl21aP84444 133 aa5.59□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Ccl21bP86792 133 aa5.59□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Ccl21cP86793 133 aa5.59□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Myo18bE9PV66 2605 aa5.59□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Igkv4-61A0A0G2JH00 117 aa5.59□□□□□ -1.51
Cdc40-201ENSMUST00000044166 Igkv3-9A0A140T8P4 119 aa5.58□□□□□ -1.52
Cdc40-201ENSMUST00000044166 9530003J23RikQ8BM26 151 aa5.58□□□□□ -1.52
Cdc40-201ENSMUST00000044166 Gm17509Q9CZ61 145 aa5.58□□□□□ -1.52
Cdc40-201ENSMUST00000044166 TrrapQ80YV3 2565 aaKnown RBP5.58□□□□□ -1.52
Cdc40-201ENSMUST00000044166 Igkv4-54A0A0G2JES9 117 aa5.58□□□□□ -1.52
Cdc40-201ENSMUST00000044166 Igkv8-24A0A140T8P5 121 aa5.58□□□□□ -1.52
Cdc40-201ENSMUST00000044166 Gm12216A0A1W2P827 62 aa5.58□□□□□ -1.52
Cdc40-201ENSMUST00000044166 Wfdc12Q9JHY3 85 aa5.58□□□□□ -1.52
Cdc40-201ENSMUST00000044166 MtorQ9JLN9 2549 aa5.57□□□□□ -1.52
Cdc40-201ENSMUST00000044166 Coa6Q8BGD8 79 aa5.57□□□□□ -1.52
Cdc40-201ENSMUST00000044166 Ly6c2P0CW03 131 aa5.56□□□□□ -1.52
Cdc40-201ENSMUST00000044166 Ighv2-2A0A075B5P8 116 aa5.56□□□□□ -1.52
Cdc40-201ENSMUST00000044166 P01821 116 aa5.56□□□□□ -1.52
Cdc40-201ENSMUST00000044166 Xirp2Q4U4S6 3784 aa5.55□□□□□ -1.52
Cdc40-201ENSMUST00000044166 Gm10770F7D043 238 aa5.55□□□□□ -1.52
Cdc40-201ENSMUST00000044166 Coa5Q99M07 74 aa5.55□□□□□ -1.52
Cdc40-201ENSMUST00000044166 Msrb1Q9JLC3 116 aa5.55□□□□□ -1.52
Cdc40-201ENSMUST00000044166 NipblQ6KCD5 2798 aaKnown RBP5.55□□□□□ -1.52
Cdc40-201ENSMUST00000044166 Igkv8-34A0A0G2JDU0 121 aa5.55□□□□□ -1.52
Cdc40-201ENSMUST00000044166 Gm10643Q3URG9 111 aa5.54□□□□□ -1.52
Cdc40-201ENSMUST00000044166 Setd2E9Q5F9 2537 aa5.53□□□□□ -1.52
Cdc40-201ENSMUST00000044166 A730071L15RikQ8C4X0 137 aa5.53□□□□□ -1.52
Cdc40-201ENSMUST00000044166 Mast4Q811L6 2618 aa5.53□□□□□ -1.52
Cdc40-201ENSMUST00000044166 Phf5aP83870 110 aaKnown RBP5.53□□□□□ -1.52
Cdc40-201ENSMUST00000044166 Leap2Q91V13 76 aa5.53□□□□□ -1.52
Cdc40-201ENSMUST00000044166 AY074887Q8R5F9 132 aa5.53□□□□□ -1.52
Cdc40-201ENSMUST00000044166 FlnaQ8BTM8 2647 aaKnown RBP5.53□□□□□ -1.52
Cdc40-201ENSMUST00000044166 U90926O08546 118 aa5.52□□□□□ -1.53
Cdc40-201ENSMUST00000044166 Hspg2Q05793 3707 aaKnown RBP5.51□□□□□ -1.53
Cdc40-201ENSMUST00000044166 Prm2P07978 107 aa5.51□□□□□ -1.53
Cdc40-201ENSMUST00000044166 Phxr4P15974 95 aa5.51□□□□□ -1.53
Cdc40-201ENSMUST00000044166 Pdzd2E9Q1M1 2796 aa5.51□□□□□ -1.53
Cdc40-201ENSMUST00000044166 Krtap11-1E9Q2E9 183 aa5.51□□□□□ -1.53
Cdc40-201ENSMUST00000044166 Cmc4Q61908 68 aa5.51□□□□□ -1.53
Cdc40-201ENSMUST00000044166 Zfp462B1AWL2 2495 aaKnown RBP5.5□□□□□ -1.53
Cdc40-201ENSMUST00000044166 Wfdc13Q5DQQ6 81 aa5.49□□□□□ -1.53
Cdc40-201ENSMUST00000044166 2310034C09RikQ9D746 214 aa5.49□□□□□ -1.53
Cdc40-201ENSMUST00000044166 Igkv8-28A0A0G2JE47 121 aa5.49□□□□□ -1.53
Cdc40-201ENSMUST00000044166 Gm16181B0V2H2 73 aa5.49□□□□□ -1.53
Cdc40-201ENSMUST00000044166 Elof1P60003 83 aa5.49□□□□□ -1.53
Cdc40-201ENSMUST00000044166 Cdk2ap2Q9CPY4 127 aa5.49□□□□□ -1.53
Cdc40-201ENSMUST00000044166 Usp9yF8VPU6 2556 aa5.49□□□□□ -1.53
Cdc40-201ENSMUST00000044166 Igkv1-88A0A140T8N1 120 aa5.48□□□□□ -1.53
Cdc40-201ENSMUST00000044166 Gm17577J3QNF7 156 aa5.48□□□□□ -1.53
Cdc40-201ENSMUST00000044166 Igkv4-92A0A0B4J1I2 117 aa5.48□□□□□ -1.53
Cdc40-201ENSMUST00000044166 Spata3Q9D9T6 193 aa5.48□□□□□ -1.53
Cdc40-201ENSMUST00000044166 Tenm3Q9WTS6 2715 aa5.47□□□□□ -1.53
Cdc40-201ENSMUST00000044166 Defb37Q7TMD2 62 aa5.47□□□□□ -1.53
Cdc40-201ENSMUST00000044166 Cox7b2Q9D2H1 82 aa5.47□□□□□ -1.53
Cdc40-201ENSMUST00000044166 D730001G18RikA0A087WQU7 115 aa5.47□□□□□ -1.53
Cdc40-201ENSMUST00000044166 Gm9767G3X930 207 aa5.45□□□□□ -1.54
Cdc40-201ENSMUST00000044166 Unc79Q0KK59 2596 aa5.45□□□□□ -1.54
Cdc40-201ENSMUST00000044166 Sprr2jO70561 109 aa5.45□□□□□ -1.54
Cdc40-201ENSMUST00000044166 Igkv1-122A0A140T8M9 119 aa5.45□□□□□ -1.54
Cdc40-201ENSMUST00000044166 Igkv3-4A0A140T8Q4 119 aa5.45□□□□□ -1.54
Cdc40-201ENSMUST00000044166 Mp68P56379 58 aa5.45□□□□□ -1.54
Cdc40-201ENSMUST00000044166 Ank2Q8C8R3 3898 aa5.44□□□□□ -1.54
Cdc40-201ENSMUST00000044166 BsnO88737 3942 aa5.44□□□□□ -1.54
Cdc40-201ENSMUST00000044166 Defb38Q7TNV7 63 aa5.44□□□□□ -1.54
Retrieved 100 of 22,080 RNA–protein pairs in 50.8 ms