RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 ScxQ64124 207 aa15.02□□□□□ -0.01
Upf3a-201ENSMUST00000043767 7530416G11RikJ3QJX6 159 aa15.01□□□□□ -0.01
Upf3a-201ENSMUST00000043767 Dnah9B1AR51 4484 aa15.01□□□□□ -0.01
Upf3a-201ENSMUST00000043767 2310050C09RikG5E8Z3 280 aa15.01□□□□□ -0.01
Upf3a-201ENSMUST00000043767 CnbpP53996 178 aaKnown RBP15.01□□□□□ -0.01
Upf3a-201ENSMUST00000043767 A730009L09RikA0A1B0GS82 72 aa15□□□□□ -0.01
Upf3a-201ENSMUST00000043767 Gm7102J3QQ10 178 aa15□□□□□ -0.01
Upf3a-201ENSMUST00000043767 Tmem254aP0DN89 123 aa15□□□□□ -0.01
Upf3a-201ENSMUST00000043767 Tmem254bP0DN90 123 aa15□□□□□ -0.01
Upf3a-201ENSMUST00000043767 Tmem254cP0DN91 123 aa15□□□□□ -0.01
Upf3a-201ENSMUST00000043767 Ighv10-3A0A075B5T6 119 aa14.99□□□□□ -0.01
Upf3a-201ENSMUST00000043767 Igkv4-92A0A0B4J1I2 117 aa14.97□□□□□ -0.01
Upf3a-201ENSMUST00000043767 Cox7b2Q9D2H1 82 aa14.97□□□□□ -0.01
Upf3a-201ENSMUST00000043767 Q9DAA7 145 aa14.97□□□□□ -0.01
Upf3a-201ENSMUST00000043767 Cox7bP56393 80 aa14.96□□□□□ -0.01
Upf3a-201ENSMUST00000043767 Inafm2A0A1L1STD6 152 aa14.96□□□□□ -0.02
Upf3a-201ENSMUST00000043767 Gm9903Q8C9Y8 129 aa14.95□□□□□ -0.02
Upf3a-201ENSMUST00000043767 Gm10308Q9CVR5 141 aa14.94□□□□□ -0.02
Upf3a-201ENSMUST00000043767 Wfdc12Q9JHY3 85 aa14.94□□□□□ -0.02
Upf3a-201ENSMUST00000043767 Trav13-2A0A075B649 110 aa14.94□□□□□ -0.02
Upf3a-201ENSMUST00000043767 Sprr4Q8CGN8 76 aa14.94□□□□□ -0.02
Upf3a-201ENSMUST00000043767 A0A286YCN5 57 aa14.93□□□□□ -0.02
Upf3a-201ENSMUST00000043767 Serp2Q6TAW2 65 aa14.93□□□□□ -0.02
Upf3a-201ENSMUST00000043767 D130052B06RikQ3UW13 202 aa14.93□□□□□ -0.02
Upf3a-201ENSMUST00000043767 MifP34884 115 aaKnown RBP14.92□□□□□ -0.02
Upf3a-201ENSMUST00000043767 BaalcQ8VHV1 145 aa14.92□□□□□ -0.02
Upf3a-201ENSMUST00000043767 Igkv8-16A0A0G2JDG9 121 aa14.91□□□□□ -0.02
Upf3a-201ENSMUST00000043767 Ormdl1Q921I0 153 aa14.91□□□□□ -0.02
Upf3a-201ENSMUST00000043767 Camk2n2Q78WH7 79 aa14.89□□□□□ -0.03
Upf3a-201ENSMUST00000043767 Igkv3-12A0A140T8P0 119 aa14.88□□□□□ -0.03
Upf3a-201ENSMUST00000043767 Cystm1Q8K353 104 aa14.88□□□□□ -0.03
Upf3a-201ENSMUST00000043767 Dnah7cA0A087WR13 4024 aa14.88□□□□□ -0.03
Upf3a-201ENSMUST00000043767 Mrpl52Q9D0Y8 121 aa14.88□□□□□ -0.03
Upf3a-201ENSMUST00000043767 Ighv10-1A0A0B4J1J6 119 aa14.87□□□□□ -0.03
Upf3a-201ENSMUST00000043767 9430015G10RikA2ASP7 199 aa14.87□□□□□ -0.03
Upf3a-201ENSMUST00000043767 Nupr2Q497P3 102 aa14.87□□□□□ -0.03
Upf3a-201ENSMUST00000043767 Defb40Q70KL2 73 aa14.87□□□□□ -0.03
Upf3a-201ENSMUST00000043767 Igkv2-109A0A075B5K6 120 aa14.86□□□□□ -0.03
Upf3a-201ENSMUST00000043767 Ube2d4D3YUH6 135 aa14.86□□□□□ -0.03
Upf3a-201ENSMUST00000043767 Igkv8-26A0A075B5N5 123 aa14.86□□□□□ -0.03
Upf3a-201ENSMUST00000043767 Gm10518F6UQQ9 182 aa14.85□□□□□ -0.03
Upf3a-201ENSMUST00000043767 Igkv8-21A0A140T8P7 120 aa14.85□□□□□ -0.03
Upf3a-201ENSMUST00000043767 Klk12B2RVZ0 247 aa14.85□□□□□ -0.03
Upf3a-201ENSMUST00000043767 Ufsp1Q9CZP0 217 aa14.85□□□□□ -0.03
Upf3a-201ENSMUST00000043767 Ighv2-5A0A0A6YY69 116 aa14.84□□□□□ -0.03
Upf3a-201ENSMUST00000043767 Gm10320E9PW43 113 aa14.83□□□□□ -0.03
Upf3a-201ENSMUST00000043767 Igkv8-27A0A0G2JF28 120 aa14.83□□□□□ -0.04
Upf3a-201ENSMUST00000043767 Igkv8-30A0A140T8M3 121 aa14.83□□□□□ -0.04
Upf3a-201ENSMUST00000043767 Rps28P62858 69 aaKnown RBP14.83□□□□□ -0.04
Upf3a-201ENSMUST00000043767 Sprr1aQ62266 144 aa14.81□□□□□ -0.04
Upf3a-201ENSMUST00000043767 Ubl5Q9EPV8 73 aa14.81□□□□□ -0.04
Upf3a-201ENSMUST00000043767 Gm9805F6YK59 57 aa14.81□□□□□ -0.04
Upf3a-201ENSMUST00000043767 Gm20726G3UX18 150 aa14.81□□□□□ -0.04
Upf3a-201ENSMUST00000043767 OxtP35454 125 aa14.81□□□□□ -0.04
Upf3a-201ENSMUST00000043767 Tmem258P61166 79 aa14.81□□□□□ -0.04
Upf3a-201ENSMUST00000043767 4930518I15RikQ3V2W7 57 aa14.81□□□□□ -0.04
Upf3a-201ENSMUST00000043767 Gm10770F7D043 238 aa14.8□□□□□ -0.04
Upf3a-201ENSMUST00000043767 Plac8Q9JI48 112 aa14.8□□□□□ -0.04
Upf3a-201ENSMUST00000043767 Trav14-1A0A0G2JF94 121 aa14.8□□□□□ -0.04
Upf3a-201ENSMUST00000043767 Reg3dQ9QUS9 175 aa14.8□□□□□ -0.04
Upf3a-201ENSMUST00000043767 TgO08710 2766 aa14.79□□□□□ -0.04
Upf3a-201ENSMUST00000043767 Defa7P50705 93 aa14.78□□□□□ -0.04
Upf3a-201ENSMUST00000043767 Defa20Q45VN2 95 aa14.77□□□□□ -0.04
Upf3a-201ENSMUST00000043767 Gm10837Q3UTT8 145 aa14.77□□□□□ -0.05
Upf3a-201ENSMUST00000043767 Gm19935A0A1B0GSF9 52 aa14.76□□□□□ -0.05
Upf3a-201ENSMUST00000043767 Tmem243B2RVB9 118 aa14.76□□□□□ -0.05
Upf3a-201ENSMUST00000043767 Gm17577J3QNF7 156 aa14.76□□□□□ -0.05
Upf3a-201ENSMUST00000043767 U90926O08546 118 aa14.76□□□□□ -0.05
Upf3a-201ENSMUST00000043767 Igkv4-58A0A0G2JGI6 119 aa14.75□□□□□ -0.05
Upf3a-201ENSMUST00000043767 GhrhP16043 103 aa14.75□□□□□ -0.05
Upf3a-201ENSMUST00000043767 Krtap10-4Q08EG8 221 aa14.75□□□□□ -0.05
Upf3a-201ENSMUST00000043767 AY074887Q8R5F9 132 aa14.74□□□□□ -0.05
Upf3a-201ENSMUST00000043767 Pde6gP09174 87 aa14.73□□□□□ -0.05
Upf3a-201ENSMUST00000043767 Fam19a1Q7TPG8 133 aa14.73□□□□□ -0.05
Upf3a-201ENSMUST00000043767 4930535I16RikQ9CUI2 172 aa14.73□□□□□ -0.05
Upf3a-201ENSMUST00000043767 Vps13dB1ART2 4390 aa14.72□□□□□ -0.05
Upf3a-201ENSMUST00000043767 Igkv3-2A0A075B5P0 119 aa14.72□□□□□ -0.05
Upf3a-201ENSMUST00000043767 Defa21Q8C1P2 93 aa14.71□□□□□ -0.05
Upf3a-201ENSMUST00000043767 PscaP57096 123 aa14.7□□□□□ -0.06
Upf3a-201ENSMUST00000043767 9530003J23RikQ8BM26 151 aa14.7□□□□□ -0.06
Upf3a-201ENSMUST00000043767 Naa38Q9D2U5 125 aa14.7□□□□□ -0.06
Upf3a-201ENSMUST00000043767 Lamtor3O88653 124 aa14.7□□□□□ -0.06
Upf3a-201ENSMUST00000043767 Ndufc1Q9CQY9 76 aa14.69□□□□□ -0.06
Upf3a-201ENSMUST00000043767 Msrb1Q9JLC3 116 aa14.68□□□□□ -0.06
Upf3a-201ENSMUST00000043767 Gm11627A6PWP4 55 aa14.67□□□□□ -0.06
Upf3a-201ENSMUST00000043767 Defa4P28311 92 aa14.66□□□□□ -0.06
Upf3a-201ENSMUST00000043767 Ighv2-2A0A075B5P8 116 aa14.65□□□□□ -0.06
Upf3a-201ENSMUST00000043767 Rbm3O89086 153 aaKnown RBP14.65□□□□□ -0.06
Upf3a-201ENSMUST00000043767 P01821 116 aa14.65□□□□□ -0.06
Upf3a-201ENSMUST00000043767 Pou2af1Q64693 256 aa14.64□□□□□ -0.07
Upf3a-201ENSMUST00000043767 2310034G01RikA0A286YDL3 209 aa14.64□□□□□ -0.07
Upf3a-201ENSMUST00000043767 Fam168bQ80XQ8 194 aa14.64□□□□□ -0.07
Upf3a-201ENSMUST00000043767 Igkv1-88A0A140T8N1 120 aa14.63□□□□□ -0.07
Upf3a-201ENSMUST00000043767 MplkipQ9D011 178 aa14.62□□□□□ -0.07
Upf3a-201ENSMUST00000043767 A730071L15RikQ8C4X0 137 aa14.61□□□□□ -0.07
Upf3a-201ENSMUST00000043767 BC048502Q80Y74 154 aa14.61□□□□□ -0.07
Upf3a-201ENSMUST00000043767 E130218I03RikA0A0U1RNU5 63 aa14.6□□□□□ -0.07
Upf3a-201ENSMUST00000043767 Samd13D3YUG0 102 aa14.6□□□□□ -0.07
Upf3a-201ENSMUST00000043767 Elof1P60003 83 aa14.6□□□□□ -0.07
Upf3a-201ENSMUST00000043767 Dnah5Q8VHE6 4621 aa14.59□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 163.8 ms