RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 KalrnA2CG49 2964 aa6.98□□□□□ -1.29
Limch1-201ENSMUST00000038188 Chd7A2AJK6 2986 aaKnown RBP6.98□□□□□ -1.29
Limch1-201ENSMUST00000038188 Cdh23Q99PF4 3354 aa6.97□□□□□ -1.29
Limch1-201ENSMUST00000038188 Anapc11Q9CPX9 84 aa6.97□□□□□ -1.29
Limch1-201ENSMUST00000038188 Gm17606F6ZL36 78 aa6.96□□□□□ -1.29
Limch1-201ENSMUST00000038188 1700074P13RikQ9D9G7 251 aa6.96□□□□□ -1.3
Limch1-201ENSMUST00000038188 Crip3Q6Q6R3 243 aa6.96□□□□□ -1.3
Limch1-201ENSMUST00000038188 Gm9821Q8K076 103 aa6.95□□□□□ -1.3
Limch1-201ENSMUST00000038188 Mki67E9PVX6 3177 aaKnown RBP6.95□□□□□ -1.3
Limch1-201ENSMUST00000038188 Tmem254aP0DN89 123 aa6.94□□□□□ -1.3
Limch1-201ENSMUST00000038188 Tmem254bP0DN90 123 aa6.94□□□□□ -1.3
Limch1-201ENSMUST00000038188 Tmem254cP0DN91 123 aa6.94□□□□□ -1.3
Limch1-201ENSMUST00000038188 BC025920Q3US60 128 aa6.94□□□□□ -1.3
Limch1-201ENSMUST00000038188 Chchd10Q7TNL9 138 aa6.93□□□□□ -1.3
Limch1-201ENSMUST00000038188 Smim20D3Z7Q2 69 aa6.93□□□□□ -1.3
Limch1-201ENSMUST00000038188 Tnrc18Q80WC3 2878 aa6.93□□□□□ -1.3
Limch1-201ENSMUST00000038188 Kmt2bO08550 2713 aa6.93□□□□□ -1.3
Limch1-201ENSMUST00000038188 UqcrqQ9CQ69 82 aa6.92□□□□□ -1.3
Limch1-201ENSMUST00000038188 Defb50Q6TU36 73 aa6.92□□□□□ -1.3
Limch1-201ENSMUST00000038188 Psors1c2Q80ZC9 134 aa6.92□□□□□ -1.3
Limch1-201ENSMUST00000038188 Sprr4Q8CGN8 76 aa6.92□□□□□ -1.3
Limch1-201ENSMUST00000038188 Reg3aO09037 175 aa6.91□□□□□ -1.3
Limch1-201ENSMUST00000038188 Smim1P0C8K7 78 aa6.89□□□□□ -1.31
Limch1-201ENSMUST00000038188 3110070M22RikQ9DAQ7 118 aa6.89□□□□□ -1.31
Limch1-201ENSMUST00000038188 Notch1Q01705 2531 aa6.89□□□□□ -1.31
Limch1-201ENSMUST00000038188 Serp1Q9Z1W5 66 aa6.89□□□□□ -1.31
Limch1-201ENSMUST00000038188 Ndufb1P0DN34 57 aa6.88□□□□□ -1.31
Limch1-201ENSMUST00000038188 Dmbt1Q60997 2085 aa6.88□□□□□ -1.31
Limch1-201ENSMUST00000038188 Cox6a2P43023 97 aa6.88□□□□□ -1.31
Limch1-201ENSMUST00000038188 CnbpP53996 178 aaKnown RBP6.87□□□□□ -1.31
Limch1-201ENSMUST00000038188 Msrb1Q9JLC3 116 aa6.87□□□□□ -1.31
Limch1-201ENSMUST00000038188 Fbn2Q61555 2907 aa6.87□□□□□ -1.31
Limch1-201ENSMUST00000038188 Dmxl1Q6PNC0 3013 aa6.87□□□□□ -1.31
Limch1-201ENSMUST00000038188 Gm10570F6VB42 170 aa6.87□□□□□ -1.31
Limch1-201ENSMUST00000038188 Bod1lE9Q6J5 3032 aa6.86□□□□□ -1.31
Limch1-201ENSMUST00000038188 Atox1O08997 68 aaKnown RBP6.86□□□□□ -1.31
Limch1-201ENSMUST00000038188 4930524J08RikQ9CUJ5 163 aa6.86□□□□□ -1.31
Limch1-201ENSMUST00000038188 Bean1Q9EQG5 255 aa6.86□□□□□ -1.31
Limch1-201ENSMUST00000038188 Krtap10-4Q08EG8 221 aa6.85□□□□□ -1.31
Limch1-201ENSMUST00000038188 Elof1P60003 83 aa6.84□□□□□ -1.31
Limch1-201ENSMUST00000038188 Gm10845Q3UNY9 185 aa6.84□□□□□ -1.31
Limch1-201ENSMUST00000038188 9530053A07RikE9PVG8 2581 aa6.84□□□□□ -1.31
Limch1-201ENSMUST00000038188 Sprr1bQ62267 153 aa6.84□□□□□ -1.31
Limch1-201ENSMUST00000038188 Gcn1E9PVA8 2671 aaKnown RBP6.84□□□□□ -1.32
Limch1-201ENSMUST00000038188 Defb45Q3V490 66 aa6.83□□□□□ -1.32
Limch1-201ENSMUST00000038188 FryE9Q8I9 3020 aa6.83□□□□□ -1.32
Limch1-201ENSMUST00000038188 Gm10999F6Q4M4 69 aa6.82□□□□□ -1.32
Limch1-201ENSMUST00000038188 Gm26602M0QWA4 95 aa6.82□□□□□ -1.32
Limch1-201ENSMUST00000038188 Igkv8-27A0A0G2JF28 120 aa6.82□□□□□ -1.32
Limch1-201ENSMUST00000038188 Q8BT88 171 aa6.82□□□□□ -1.32
Limch1-201ENSMUST00000038188 Mrpl34Q99N91 92 aa6.81□□□□□ -1.32
Limch1-201ENSMUST00000038188 2310050C09RikG5E8Z3 280 aa6.8□□□□□ -1.32
Limch1-201ENSMUST00000038188 H2al1mQ9DAD9 105 aa6.8□□□□□ -1.32
Limch1-201ENSMUST00000038188 Muc2Q80Z19 2680 aa6.8□□□□□ -1.32
Limch1-201ENSMUST00000038188 NbdyA0A0N4SUI7 68 aa6.8□□□□□ -1.32
Limch1-201ENSMUST00000038188 Tmem258P61166 79 aa6.79□□□□□ -1.32
Limch1-201ENSMUST00000038188 Rnase13Q5GAM7 153 aa6.79□□□□□ -1.32
Limch1-201ENSMUST00000038188 Ndufc1Q9CQY9 76 aa6.79□□□□□ -1.32
Limch1-201ENSMUST00000038188 AI854703Q8BIN3 203 aa6.79□□□□□ -1.32
Limch1-201ENSMUST00000038188 H2al1aQ5M8Q2 105 aa6.78□□□□□ -1.32
Limch1-201ENSMUST00000038188 H2al1eQ810S6 105 aa6.78□□□□□ -1.32
Limch1-201ENSMUST00000038188 Gm28539A0A087WSL9 92 aa6.78□□□□□ -1.32
Limch1-201ENSMUST00000038188 H2al1bA0A087WP11 105 aa6.78□□□□□ -1.32
Limch1-201ENSMUST00000038188 Tenm4Q3UHK6 2771 aa6.77□□□□□ -1.32
Limch1-201ENSMUST00000038188 Ubr5Q80TP3 2792 aa6.77□□□□□ -1.32
Limch1-201ENSMUST00000038188 Nbeal2Q6ZQA0 2742 aa6.77□□□□□ -1.33
Limch1-201ENSMUST00000038188 Krtap10-10A0A1W2P7T6 217 aa6.77□□□□□ -1.33
Limch1-201ENSMUST00000038188 Map1aQ9QYR6 2776 aa6.77□□□□□ -1.33
Limch1-201ENSMUST00000038188 Krtap13O88375 197 aa6.77□□□□□ -1.33
Limch1-201ENSMUST00000038188 Gm10065F6TJM2 114 aa6.77□□□□□ -1.33
Limch1-201ENSMUST00000038188 Gm45213A0A0U1RNZ6 101 aa6.76□□□□□ -1.33
Limch1-201ENSMUST00000038188 Tnp2P11378 117 aa6.76□□□□□ -1.33
Limch1-201ENSMUST00000038188 Gm44790A0A0N4SV91 103 aa6.76□□□□□ -1.33
Limch1-201ENSMUST00000038188 Csdc2Q91YQ3 154 aa6.76□□□□□ -1.33
Limch1-201ENSMUST00000038188 Zcchc13Q9D548 170 aa6.75□□□□□ -1.33
Limch1-201ENSMUST00000038188 Ypel4Q65Z93 127 aa6.75□□□□□ -1.33
Limch1-201ENSMUST00000038188 AtmQ62388 3066 aa6.75□□□□□ -1.33
Limch1-201ENSMUST00000038188 Igfn1Q3KNY0 2849 aa6.74□□□□□ -1.33
Limch1-201ENSMUST00000038188 Q8BGJ3 129 aa6.74□□□□□ -1.33
Limch1-201ENSMUST00000038188 Sostdc1Q9CQN4 206 aa6.74□□□□□ -1.33
Limch1-201ENSMUST00000038188 Serp2Q6TAW2 65 aa6.73□□□□□ -1.33
Limch1-201ENSMUST00000038188 Krtap15-1Q9QZU5 150 aa6.72□□□□□ -1.33
Limch1-201ENSMUST00000038188 A930002H24RikQ8C8Y3 163 aa6.72□□□□□ -1.33
Limch1-201ENSMUST00000038188 Brk1Q91VR8 75 aa6.71□□□□□ -1.33
Limch1-201ENSMUST00000038188 Gm11213A0A1B0GR83 88 aa6.71□□□□□ -1.34
Limch1-201ENSMUST00000038188 CenpwQ3URR0 86 aa6.71□□□□□ -1.34
Limch1-201ENSMUST00000038188 Gm10770F7D043 238 aa6.7□□□□□ -1.34
Limch1-201ENSMUST00000038188 Unc80Q8BLN6 3261 aa6.7□□□□□ -1.34
Limch1-201ENSMUST00000038188 Gm26620Q9CY65 116 aa6.69□□□□□ -1.34
Limch1-201ENSMUST00000038188 Spink13Q3UTS8 97 aa6.69□□□□□ -1.34
Limch1-201ENSMUST00000038188 Tax1bp3Q9DBG9 124 aa6.69□□□□□ -1.34
Limch1-201ENSMUST00000038188 Gm10320E9PW43 113 aa6.69□□□□□ -1.34
Limch1-201ENSMUST00000038188 Defb1P56386 69 aa6.68□□□□□ -1.34
Limch1-201ENSMUST00000038188 Vps13aQ5H8C4 3166 aa6.68□□□□□ -1.34
Limch1-201ENSMUST00000038188 Cypt15B1AXS0 87 aa6.68□□□□□ -1.34
Limch1-201ENSMUST00000038188 C530025M09RikF6RGA8 229 aa6.68□□□□□ -1.34
Limch1-201ENSMUST00000038188 Fam240bJ3QMB3 78 aa6.66□□□□□ -1.34
Limch1-201ENSMUST00000038188 Ndufs5Q99LY9 106 aa6.66□□□□□ -1.34
Limch1-201ENSMUST00000038188 4930507D05RikQ8C9C9 103 aa6.66□□□□□ -1.34
Limch1-201ENSMUST00000038188 Col6a5A6H584 2640 aa6.65□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 66.1 ms