RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Rbm3O89086 153 aaKnown RBP16.28■□□□□ 0.2
Cldnd1-201ENSMUST00000023426 Wfdc17Q5SSJ1 76 aa16.28■□□□□ 0.2
Cldnd1-201ENSMUST00000023426 Gm16485Q8C4B7 115 aa16.26■□□□□ 0.19
Cldnd1-201ENSMUST00000023426 Gm36176A0A1W2P8D5 158 aa16.25■□□□□ 0.19
Cldnd1-201ENSMUST00000023426 Srrm2Q8BTI8 2703 aaKnown RBP16.24■□□□□ 0.19
Cldnd1-201ENSMUST00000023426 7530416G11RikJ3QJX6 159 aa16.24■□□□□ 0.19
Cldnd1-201ENSMUST00000023426 4930535I16RikQ9CUI2 172 aa16.24■□□□□ 0.19
Cldnd1-201ENSMUST00000023426 9530053A07RikE9PVG8 2581 aa16.24■□□□□ 0.19
Cldnd1-201ENSMUST00000023426 PtprqP0C5E4 2300 aa16.24■□□□□ 0.19
Cldnd1-201ENSMUST00000023426 ApcQ61315 2845 aa16.24■□□□□ 0.19
Cldnd1-201ENSMUST00000023426 SmcpP15265 143 aa16.24■□□□□ 0.19
Cldnd1-201ENSMUST00000023426 Dnah3Q8BW94 4083 aa16.23■□□□□ 0.19
Cldnd1-201ENSMUST00000023426 Hivep1Q03172 2688 aa16.22■□□□□ 0.19
Cldnd1-201ENSMUST00000023426 Sslp1Q3UN54 99 aa16.21■□□□□ 0.19
Cldnd1-201ENSMUST00000023426 A730071L15RikQ8C4X0 137 aa16.21■□□□□ 0.18
Cldnd1-201ENSMUST00000023426 Gm11627A6PWP4 55 aa16.2■□□□□ 0.18
Cldnd1-201ENSMUST00000023426 Cystm1Q8K353 104 aa16.19■□□□□ 0.18
Cldnd1-201ENSMUST00000023426 Ighv2-2A0A075B5P8 116 aa16.18■□□□□ 0.18
Cldnd1-201ENSMUST00000023426 P01821 116 aa16.18■□□□□ 0.18
Cldnd1-201ENSMUST00000023426 Sprr1aQ62266 144 aa16.17■□□□□ 0.18
Cldnd1-201ENSMUST00000023426 Pou2af1Q64693 256 aa16.17■□□□□ 0.18
Cldnd1-201ENSMUST00000023426 Serp2Q6TAW2 65 aa16.17■□□□□ 0.18
Cldnd1-201ENSMUST00000023426 Spata3Q9D9T6 193 aa16.16■□□□□ 0.18
Cldnd1-201ENSMUST00000023426 D130052B06RikQ3UW13 202 aa16.15■□□□□ 0.18
Cldnd1-201ENSMUST00000023426 MplkipQ9D011 178 aa16.15■□□□□ 0.18
Cldnd1-201ENSMUST00000023426 Smim20D3Z7Q2 69 aa16.14■□□□□ 0.17
Cldnd1-201ENSMUST00000023426 Defb37Q7TMD2 62 aa16.14■□□□□ 0.17
Cldnd1-201ENSMUST00000023426 Notch1Q01705 2531 aa16.14■□□□□ 0.17
Cldnd1-201ENSMUST00000023426 Fam19a1Q7TPG8 133 aa16.13■□□□□ 0.17
Cldnd1-201ENSMUST00000023426 Dmac1Q9CQ00 111 aa16.13■□□□□ 0.17
Cldnd1-201ENSMUST00000023426 Nsd1O88491 2588 aaKnown RBP16.13■□□□□ 0.17
Cldnd1-201ENSMUST00000023426 AW011738F6S7Q2 159 aa16.13■□□□□ 0.17
Cldnd1-201ENSMUST00000023426 Smim29Q8R043 75 aa16.11■□□□□ 0.17
Cldnd1-201ENSMUST00000023426 Wfdc6bF6ULY1 148 aa16.09■□□□□ 0.17
Cldnd1-201ENSMUST00000023426 Vpreb2P13373 142 aa16.09■□□□□ 0.17
Cldnd1-201ENSMUST00000023426 Igkv8-28A0A0G2JE47 121 aa16.09■□□□□ 0.17
Cldnd1-201ENSMUST00000023426 Igkv1-122A0A140T8M9 119 aa16.09■□□□□ 0.17
Cldnd1-201ENSMUST00000023426 Gm7137J3QMW1 236 aa16.07■□□□□ 0.16
Cldnd1-201ENSMUST00000023426 P84750 121 aa16.07■□□□□ 0.16
Cldnd1-201ENSMUST00000023426 Defb10Q8R2I8 73 aa16.07■□□□□ 0.16
Cldnd1-201ENSMUST00000023426 Prol1E9PYQ4 312 aa16.07■□□□□ 0.16
Cldnd1-201ENSMUST00000023426 4930518I15RikQ3V2W7 57 aa16.06■□□□□ 0.16
Cldnd1-201ENSMUST00000023426 Defa7P50705 93 aa16.06■□□□□ 0.16
Cldnd1-201ENSMUST00000023426 Igkv3-12A0A140T8P0 119 aa16.05■□□□□ 0.16
Cldnd1-201ENSMUST00000023426 Tmem243B2RVB9 118 aa16.05■□□□□ 0.16
Cldnd1-201ENSMUST00000023426 Sfta2E9PXB6 77 aa16.05■□□□□ 0.16
Cldnd1-201ENSMUST00000023426 Obox2E9PXV9 151 aa16.04■□□□□ 0.16
Cldnd1-201ENSMUST00000023426 Scgb1b2O35176 93 aa16.04■□□□□ 0.16
Cldnd1-201ENSMUST00000023426 Ndufc1Q9CQY9 76 aa16.03■□□□□ 0.16
Cldnd1-201ENSMUST00000023426 Sprr2jO70561 109 aa16.02■□□□□ 0.16
Cldnd1-201ENSMUST00000023426 Defa4P28311 92 aa16.02■□□□□ 0.16
Cldnd1-201ENSMUST00000023426 ScxQ64124 207 aa16.01■□□□□ 0.15
Cldnd1-201ENSMUST00000023426 A830005F24RikQ8BRT5 167 aa16.01■□□□□ 0.15
Cldnd1-201ENSMUST00000023426 Col6a5A6H584 2640 aa16■□□□□ 0.15
Cldnd1-201ENSMUST00000023426 FlnbQ80X90 2602 aaKnown RBP16■□□□□ 0.15
Cldnd1-201ENSMUST00000023426 Igkv1-110A0A0B4J1I0 119 aa15.99■□□□□ 0.15
Cldnd1-201ENSMUST00000023426 A930002H24RikQ8C8Y3 163 aa15.99■□□□□ 0.15
Cldnd1-201ENSMUST00000023426 Fam168bQ80XQ8 194 aa15.98■□□□□ 0.15
Cldnd1-201ENSMUST00000023426 Naa38Q9D2U5 125 aa15.98■□□□□ 0.15
Cldnd1-201ENSMUST00000023426 Gm17689B3GLJ4 109 aa15.98■□□□□ 0.15
Cldnd1-201ENSMUST00000023426 GhrhP16043 103 aa15.98■□□□□ 0.15
Cldnd1-201ENSMUST00000023426 A0A286YE02 88 aa15.97■□□□□ 0.15
Cldnd1-201ENSMUST00000023426 Gm3618D3Z4P5 127 aa15.96■□□□□ 0.15
Cldnd1-201ENSMUST00000023426 Gm20726G3UX18 150 aa15.96■□□□□ 0.15
Cldnd1-201ENSMUST00000023426 Gm2916Q9D9B9 127 aa15.96■□□□□ 0.15
Cldnd1-201ENSMUST00000023426 Cox6a2P43023 97 aa15.95■□□□□ 0.14
Cldnd1-201ENSMUST00000023426 Defa21Q8C1P2 93 aa15.94■□□□□ 0.14
Cldnd1-201ENSMUST00000023426 Gm11011D3Z3L9 86 aa15.93■□□□□ 0.14
Cldnd1-201ENSMUST00000023426 Fam229bQ8CF36 80 aa15.9■□□□□ 0.14
Cldnd1-201ENSMUST00000023426 Dnah17Q69Z23 4481 aa15.88■□□□□ 0.13
Cldnd1-201ENSMUST00000023426 Gm37389A0A0A6YW05 95 aa15.88■□□□□ 0.13
Cldnd1-201ENSMUST00000023426 P06320 134 aa15.88■□□□□ 0.13
Cldnd1-201ENSMUST00000023426 BaalcQ8VHV1 145 aa15.88■□□□□ 0.13
Cldnd1-201ENSMUST00000023426 Fam19a5Q91WE9 132 aa15.88■□□□□ 0.13
Cldnd1-201ENSMUST00000023426 Dnah14A0A140LIJ4 4489 aa15.88■□□□□ 0.13
Cldnd1-201ENSMUST00000023426 Igkv3-2A0A075B5P0 119 aa15.88■□□□□ 0.13
Cldnd1-201ENSMUST00000023426 Tmem258P61166 79 aa15.87■□□□□ 0.13
Cldnd1-201ENSMUST00000023426 Defa23Q5G866 93 aa15.86■□□□□ 0.13
Cldnd1-201ENSMUST00000023426 2310061N02RikQ9D6S9 174 aa15.85■□□□□ 0.13
Cldnd1-201ENSMUST00000023426 Dnah6E9Q0B6 4144 aa15.85■□□□□ 0.13
Cldnd1-201ENSMUST00000023426 Vpreb1P13372 142 aa15.85■□□□□ 0.13
Cldnd1-201ENSMUST00000023426 A330070K13RikQ8CA53 115 aa15.85■□□□□ 0.13
Cldnd1-201ENSMUST00000023426 Dnah10D3YYQ8 4591 aa15.85■□□□□ 0.13
Cldnd1-201ENSMUST00000023426 Fam104aA2A6P4 185 aa15.84■□□□□ 0.13
Cldnd1-201ENSMUST00000023426 Vpreb3D3Z6J4 130 aa15.83■□□□□ 0.13
Cldnd1-201ENSMUST00000023426 SvipQ3UZP4 77 aa15.83■□□□□ 0.13
Cldnd1-201ENSMUST00000023426 Fam19a3Q7TPG6 132 aa15.83■□□□□ 0.12
Cldnd1-201ENSMUST00000023426 Dnah1E9Q8T7 4250 aa15.82■□□□□ 0.12
Cldnd1-201ENSMUST00000023426 VwfQ8CIZ8 2813 aa15.82■□□□□ 0.12
Cldnd1-201ENSMUST00000023426 Gm10401E9Q3K6 71 aa15.82■□□□□ 0.12
Cldnd1-201ENSMUST00000023426 U90926O08546 118 aa15.82■□□□□ 0.12
Cldnd1-201ENSMUST00000023426 Gm19935A0A1B0GSF9 52 aa15.82■□□□□ 0.12
Cldnd1-201ENSMUST00000023426 Gm12353A2AGJ4 60 aa15.82■□□□□ 0.12
Cldnd1-201ENSMUST00000023426 B9d2Q3UK10 175 aa15.8■□□□□ 0.12
Cldnd1-201ENSMUST00000023426 B230307C23RikQ8BLB2 64 aa15.79■□□□□ 0.12
Cldnd1-201ENSMUST00000023426 PscaP57096 123 aa15.78■□□□□ 0.12
Cldnd1-201ENSMUST00000023426 Ube2bP63147 152 aa15.78■□□□□ 0.12
Cldnd1-201ENSMUST00000023426 Rps28P62858 69 aaKnown RBP15.77■□□□□ 0.11
Cldnd1-201ENSMUST00000023426 SycnQ8VCK7 134 aa15.76■□□□□ 0.11
Cldnd1-201ENSMUST00000023426 Dnah7bL7N1Y0 4068 aa15.74■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 7.8 ms