RNA–Protein interactions for RNA: ENSMUST00000020441.12

Vps13d-201, Transcript of Vacuolar protein sorting 13D, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Vps13d, Length 15,665 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13d-201ENSMUST00000020441 Sprr4Q8CGN8 76 aa3.75□□□□□ -1.81
Vps13d-201ENSMUST00000020441 Wfdc17Q5SSJ1 76 aa3.75□□□□□ -1.81
Vps13d-201ENSMUST00000020441 Q8BGJ3 129 aa3.75□□□□□ -1.81
Vps13d-201ENSMUST00000020441 Sostdc1Q9CQN4 206 aa3.75□□□□□ -1.81
Vps13d-201ENSMUST00000020441 Cdc42se1Q8BHL7 80 aa3.74□□□□□ -1.81
Vps13d-201ENSMUST00000020441 Usp24B1AY13 2617 aaKnown RBP3.74□□□□□ -1.81
Vps13d-201ENSMUST00000020441 SnurfQ9WU12 71 aa3.74□□□□□ -1.81
Vps13d-201ENSMUST00000020441 Gm10197F6QEY5 67 aa3.74□□□□□ -1.81
Vps13d-201ENSMUST00000020441 A930002H24RikQ8C8Y3 163 aa3.73□□□□□ -1.81
Vps13d-201ENSMUST00000020441 Defb50Q6TU36 73 aa3.73□□□□□ -1.81
Vps13d-201ENSMUST00000020441 Gm10642Q3TWM1 71 aa3.73□□□□□ -1.81
Vps13d-201ENSMUST00000020441 Fn1P11276 2477 aaKnown RBP3.73□□□□□ -1.81
Vps13d-201ENSMUST00000020441 Gm20538F6Z9R1 75 aa3.72□□□□□ -1.81
Vps13d-201ENSMUST00000020441 Bean1Q9EQG5 255 aa3.72□□□□□ -1.81
Vps13d-201ENSMUST00000020441 Gm10770F7D043 238 aa3.72□□□□□ -1.81
Vps13d-201ENSMUST00000020441 CicQ924A2 2510 aa3.71□□□□□ -1.82
Vps13d-201ENSMUST00000020441 Defb39Q70KL3 74 aa3.71□□□□□ -1.82
Vps13d-201ENSMUST00000020441 1700018G05RikA0A1B0GSI2 66 aa3.71□□□□□ -1.82
Vps13d-201ENSMUST00000020441 CnbpP53996 178 aaKnown RBP3.71□□□□□ -1.82
Vps13d-201ENSMUST00000020441 Defb38Q7TNV7 63 aa3.71□□□□□ -1.82
Vps13d-201ENSMUST00000020441 A530084C06RikQ3UTW2 186 aa3.7□□□□□ -1.82
Vps13d-201ENSMUST00000020441 AplnQ9R0R4 77 aa3.7□□□□□ -1.82
Vps13d-201ENSMUST00000020441 AY074887Q8R5F9 132 aa3.7□□□□□ -1.82
Vps13d-201ENSMUST00000020441 Gm44790A0A0N4SV91 103 aa3.7□□□□□ -1.82
Vps13d-201ENSMUST00000020441 Phxr4P15974 95 aa3.69□□□□□ -1.82
Vps13d-201ENSMUST00000020441 Gpr15lA0A0B4J1N3 78 aa3.69□□□□□ -1.82
Vps13d-201ENSMUST00000020441 OxtP35454 125 aa3.69□□□□□ -1.82
Vps13d-201ENSMUST00000020441 Q8BT88 171 aa3.68□□□□□ -1.82
Vps13d-201ENSMUST00000020441 Gm10999F6Q4M4 69 aa3.68□□□□□ -1.82
Vps13d-201ENSMUST00000020441 Defb37Q7TMD2 62 aa3.67□□□□□ -1.82
Vps13d-201ENSMUST00000020441 Phf5aP83870 110 aaKnown RBP3.67□□□□□ -1.82
Vps13d-201ENSMUST00000020441 FlnbQ80X90 2602 aaKnown RBP3.67□□□□□ -1.82
Vps13d-201ENSMUST00000020441 AI854703Q8BIN3 203 aa3.66□□□□□ -1.82
Vps13d-201ENSMUST00000020441 Coa5Q99M07 74 aa3.65□□□□□ -1.82
Vps13d-201ENSMUST00000020441 Gm20661K7N787 53 aa3.65□□□□□ -1.82
Vps13d-201ENSMUST00000020441 Fam104aA2A6P4 185 aa3.65□□□□□ -1.82
Vps13d-201ENSMUST00000020441 Gm3285A0A1W2P7U0 201 aa3.65□□□□□ -1.83
Vps13d-201ENSMUST00000020441 Cypt15B1AXS0 87 aa3.65□□□□□ -1.83
Vps13d-201ENSMUST00000020441 7530416G11RikJ3QJX6 159 aa3.65□□□□□ -1.83
Vps13d-201ENSMUST00000020441 Mp68P56379 58 aa3.65□□□□□ -1.83
Vps13d-201ENSMUST00000020441 Zcchc13Q9D548 170 aa3.64□□□□□ -1.83
Vps13d-201ENSMUST00000020441 Lypd5Q9D7Z7 256 aa3.63□□□□□ -1.83
Vps13d-201ENSMUST00000020441 Gm26620Q9CY65 116 aa3.63□□□□□ -1.83
Vps13d-201ENSMUST00000020441 FlnaQ8BTM8 2647 aaKnown RBP3.63□□□□□ -1.83
Vps13d-201ENSMUST00000020441 Gm10065F6TJM2 114 aa3.62□□□□□ -1.83
Vps13d-201ENSMUST00000020441 Spaca4Q80ZQ0 127 aa3.62□□□□□ -1.83
Vps13d-201ENSMUST00000020441 1810062G17RikG3X8Y2 129 aa3.62□□□□□ -1.83
Vps13d-201ENSMUST00000020441 Zfp292Q9Z2U2 2698 aa3.61□□□□□ -1.83
Vps13d-201ENSMUST00000020441 Fam168bQ80XQ8 194 aa3.61□□□□□ -1.83
Vps13d-201ENSMUST00000020441 Krtap11-1E9Q2E9 183 aa3.61□□□□□ -1.83
Vps13d-201ENSMUST00000020441 Cypt14J3QPF7 87 aa3.59□□□□□ -1.83
Vps13d-201ENSMUST00000020441 AtrQ9JKK8 2635 aa3.59□□□□□ -1.83
Vps13d-201ENSMUST00000020441 Gcn1E9PVA8 2671 aaKnown RBP3.59□□□□□ -1.83
Vps13d-201ENSMUST00000020441 CenpfE9Q3P4 2997 aaKnown RBP3.59□□□□□ -1.84
Vps13d-201ENSMUST00000020441 Gm5617Q91VN2 117 aa3.58□□□□□ -1.84
Vps13d-201ENSMUST00000020441 Map1aQ9QYR6 2776 aa3.58□□□□□ -1.84
Vps13d-201ENSMUST00000020441 C530025M09RikF6RGA8 229 aa3.57□□□□□ -1.84
Vps13d-201ENSMUST00000020441 UtrnE9Q6R7 3430 aa3.57□□□□□ -1.84
Vps13d-201ENSMUST00000020441 Eif4ebp3Q80VV3 101 aa3.57□□□□□ -1.84
Vps13d-201ENSMUST00000020441 Nsd1O88491 2588 aaKnown RBP3.57□□□□□ -1.84
Vps13d-201ENSMUST00000020441 Prr13Q9CQJ5 137 aa3.57□□□□□ -1.84
Vps13d-201ENSMUST00000020441 Akap13E9Q394 2776 aa3.57□□□□□ -1.84
Vps13d-201ENSMUST00000020441 Gm9195A0A140LHT4 2805 aa3.56□□□□□ -1.84
Vps13d-201ENSMUST00000020441 Defb9Q8R2I6 67 aa3.56□□□□□ -1.84
Vps13d-201ENSMUST00000020441 Notch1Q01705 2531 aa3.56□□□□□ -1.84
Vps13d-201ENSMUST00000020441 Ep400Q8CHI8 3072 aaKnown RBP3.56□□□□□ -1.84
Vps13d-201ENSMUST00000020441 Gm21798J3QNU5 87 aa3.56□□□□□ -1.84
Vps13d-201ENSMUST00000020441 Gm9821Q8K076 103 aa3.55□□□□□ -1.84
Vps13d-201ENSMUST00000020441 Golgb1E9PVZ8 3238 aa3.55□□□□□ -1.84
Vps13d-201ENSMUST00000020441 CriptO70333 101 aa3.55□□□□□ -1.84
Vps13d-201ENSMUST00000020441 Rnase13Q5GAM7 153 aa3.55□□□□□ -1.84
Vps13d-201ENSMUST00000020441 A330070K13RikQ8CA53 115 aa3.55□□□□□ -1.84
Vps13d-201ENSMUST00000020441 RetnlbQ99P86 105 aa3.54□□□□□ -1.84
Vps13d-201ENSMUST00000020441 NipblQ6KCD5 2798 aaKnown RBP3.54□□□□□ -1.84
Vps13d-201ENSMUST00000020441 Odf3bQ5M8M2 238 aa3.53□□□□□ -1.84
Vps13d-201ENSMUST00000020441 NbdyA0A0N4SUI7 68 aa3.53□□□□□ -1.84
Vps13d-201ENSMUST00000020441 2310034C09RikQ9D746 214 aa3.53□□□□□ -1.84
Vps13d-201ENSMUST00000020441 Chd6A3KFM7 2711 aa3.53□□□□□ -1.84
Vps13d-201ENSMUST00000020441 Chtf8P0CG14 533 aa3.53□□□□□ -1.84
Vps13d-201ENSMUST00000020441 Prrc2cQ3TLH4 2846 aaKnown RBP3.53□□□□□ -1.84
Vps13d-201ENSMUST00000020441 Gm42715A0A087WP63 3095 aaKnown RBP3.53□□□□□ -1.84
Vps13d-201ENSMUST00000020441 Stab1Q8R4Y4 2571 aa3.52□□□□□ -1.85
Vps13d-201ENSMUST00000020441 HrnrQ8VHD8 2496 aa3.52□□□□□ -1.85
Vps13d-201ENSMUST00000020441 Plac8Q9JI48 112 aa3.52□□□□□ -1.85
Vps13d-201ENSMUST00000020441 Defb1P56386 69 aa3.51□□□□□ -1.85
Vps13d-201ENSMUST00000020441 Gm9955Q8CEJ8 102 aa3.5□□□□□ -1.85
Vps13d-201ENSMUST00000020441 Phxr5P08399 672 aa3.5□□□□□ -1.85
Vps13d-201ENSMUST00000020441 Jbts17Q8CE72 3214 aa3.49□□□□□ -1.85
Vps13d-201ENSMUST00000020441 Hectd1Q69ZR2 2618 aaKnown RBP3.49□□□□□ -1.85
Vps13d-201ENSMUST00000020441 Tnrc18Q80WC3 2878 aa3.48□□□□□ -1.85
Vps13d-201ENSMUST00000020441 Dnah12Q3V0Q1 3086 aa3.47□□□□□ -1.85
Vps13d-201ENSMUST00000020441 Sprr1aQ62266 144 aa3.47□□□□□ -1.85
Vps13d-201ENSMUST00000020441 Mast4Q811L6 2618 aa3.46□□□□□ -1.86
Vps13d-201ENSMUST00000020441 Igsf10Q3V1M1 2594 aa3.46□□□□□ -1.86
Vps13d-201ENSMUST00000020441 Prune2Q52KR3 3084 aa3.45□□□□□ -1.86
Vps13d-201ENSMUST00000020441 Gm10139O88245 57 aa3.45□□□□□ -1.86
Vps13d-201ENSMUST00000020441 PcntP48725 2898 aa3.44□□□□□ -1.86
Vps13d-201ENSMUST00000020441 Usp34Q6ZQ93 3582 aa3.44□□□□□ -1.86
Vps13d-201ENSMUST00000020441 Cep350E9Q309 3095 aa3.43□□□□□ -1.86
Vps13d-201ENSMUST00000020441 Tep1P97499 2629 aa3.43□□□□□ -1.86
Retrieved 100 of 22,080 RNA–protein pairs in 46.6 ms